Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008048 Vanilla planifolia HOM05D004907 ORTHO05D005707 4.6e-205 717.6 352 100.0
CiPaw.05G186900 Carya illinoinensis HOM05D004907 ORTHO05D005707 4.0e-39 166.4 357 33.6
Nn4g22709 Nelumbo nucifera HOM05D004907 ORTHO05D005707 2.4e-36 157.1 364 30.8
Haze_12215 Corylus avellana HOM05D004907 ORTHO05D005707 1.2e-35 154.8 358 31.0
Lj6P808T27 Lonicera japonica HOM05D004907 ORTHO05D005707 5.9e-35 152.5 359 31.2
PGR119G0630 Punica granatum HOM05D004907 ORTHO05D005707 7.7e-35 152.1 363 31.4
Cfa009182 Carpinus fangiana HOM05D004907 ORTHO05D005707 1.3e-34 151.4 357 31.1
CiPaw.06G069900 Carya illinoinensis HOM05D004907 ORTHO05D005707 1.3e-34 151.4 364 32.1
QL03p059196 Quercus lobata HOM05D004907 ORTHO05D005707 2.3e-34 150.6 348 32.5
Cfa009181 Carpinus fangiana HOM05D004907 ORTHO05D005707 3.3e-33 146.7 364 29.4
MD16G1096500 Malus domestica HOM05D004907 ORTHO05D005707 2.8e-32 143.7 369 30.1
RcHm_v2.0_Chr4g0441991 Rosa chinensis HOM05D004907 ORTHO05D005707 3.6e-32 143.3 367 33.0
Gohir.D01G149900 Gossypium hirsutum HOM05D004907 ORTHO05D005707 4.7e-32 142.9 364 30.2
Gorai.002G186000 Gossypium raimondii HOM05D004907 ORTHO05D005707 6.1e-32 142.5 364 30.2
Rhsim12G0042700 Rhododendron simsii HOM05D004907 ORTHO05D005707 8.0e-32 142.1 364 29.9
Prupe.1G249900 Prunus persica HOM05D004907 ORTHO05D005707 1.4e-31 141.4 372 30.6
PSO144G0054 Papaver somniferum HOM05D004907 ORTHO05D005707 4.0e-31 139.8 356 29.8
Lsat_1_v5_gn_3_28580 Lactuca sativa HOM05D004907 ORTHO05D005707 1.2e-30 138.3 358 30.2
Atru.chr11.2072 Acer truncatum HOM05D004907 ORTHO05D005707 1.5e-30 137.9 356 29.8
Ciclev10031561m.g Citrus clementina HOM05D004907 ORTHO05D005707 4.4e-30 136.3 359 31.2
Manes.13G027600 Manihot esculenta HOM05D004907 ORTHO05D005707 7.5e-30 135.6 356 28.9
Gohir.A01G160100 Gossypium hirsutum HOM05D004907 ORTHO05D005707 1.3e-29 134.8 321 31.8
TAR374G1110 Trochodendron aralioides HOM05D004907 ORTHO05D005707 1.7e-29 134.4 357 27.5
Phvul.003G062300 Phaseolus vulgaris HOM05D004907 ORTHO05D005707 2.9e-29 133.7 362 33.1
PSO170G6868 Papaver somniferum HOM05D004907 ORTHO05D005707 3.7e-29 133.3 359 30.1
PSO441G0001 Papaver somniferum HOM05D004907 ORTHO05D005707 3.7e-29 133.3 359 30.1
FvH4_4g32970 Fragaria vesca HOM05D004907 ORTHO05D005707 8.3e-29 132.1 361 31.9
FAN12G3344 Fragaria x ananassa HOM05D004907 ORTHO05D005707 1.1e-28 131.7 361 31.6
Lsat_1_v5_gn_8_154601 Lactuca sativa HOM05D004907 ORTHO05D005707 1.1e-28 131.7 353 28.6
CDE06G1150 Ceratophyllum demersum HOM05D004907 ORTHO05D005707 2.4e-28 130.6 326 28.5
DCAR_007072 Daucus carota HOM05D004907 ORTHO05D005707 2.4e-28 130.6 355 30.4
Hma1.2p1_0160F.1_g071120 Hydrangea macrophylla HOM05D004907 ORTHO05D005707 2.4e-28 130.6 337 30.0
CSS0001528 Camellia sinensis var. sinensis HOM05D004907 ORTHO05D005707 7.0e-28 129.0 350 28.3
PSO063G4965 Papaver somniferum HOM05D004907 ORTHO05D005707 7.0e-28 129.0 361 28.8
PSO170G1656 Papaver somniferum HOM05D004907 ORTHO05D005707 9.2e-28 128.6 356 29.2
CAN.G728.4 Capsicum annuum HOM05D004907 ORTHO05D005707 1.2e-27 128.3 365 27.7
MSTRG.7910 Avicennia marina HOM05D004907 ORTHO05D005707 1.6e-27 127.9 356 30.6
Lj4g0000696 Lotus japonicus HOM05D004907 ORTHO05D005707 1.6e-27 127.9 361 29.1
Nitab4.5_0000338g0040 Nicotiana tabacum HOM05D004907 ORTHO05D005707 1.6e-27 127.9 368 27.7
Lalb_Chr05g0216711 Lupinus albus HOM05D004907 ORTHO05D005707 2.0e-27 127.5 364 29.7
AUR62005416 Chenopodium quinoa HOM05D004907 ORTHO05D005707 2.7e-27 127.1 325 29.8
Rhsim12G0113900 Rhododendron simsii HOM05D004907 ORTHO05D005707 2.7e-27 127.1 339 33.0
Nitab4.5_0015209g0010 Nicotiana tabacum HOM05D004907 ORTHO05D005707 3.5e-27 126.7 368 27.2
AL1G37180 Arabidopsis lyrata HOM05D004907 ORTHO05D005707 4.6e-27 126.3 335 29.3
FAN07G1203 Fragaria x ananassa HOM05D004907 ORTHO05D005707 4.6e-27 126.3 353 31.2
Sc04g0009300 Simmondsia chinensis HOM05D004907 ORTHO05D005707 4.6e-27 126.3 340 31.5
Gohir.D02G160600 Gossypium hirsutum HOM05D004907 ORTHO05D005707 7.8e-27 125.6 354 29.4
MD13G1095300 Malus domestica HOM05D004907 ORTHO05D005707 1.0e-26 125.2 365 28.8
CANSAT01G1025 Cannabis sativa HOM05D004907 ORTHO05D005707 1.3e-26 124.8 358 29.3
FAN17G0584 Fragaria x ananassa HOM05D004907 ORTHO05D005707 1.3e-26 124.8 339 32.2
PGSC0003DMG400013488 Solanum tuberosum HOM05D004907 ORTHO05D005707 1.3e-26 124.8 364 27.5
AUR62014077 Chenopodium quinoa HOM05D004907 ORTHO05D005707 1.7e-26 124.4 333 30.0
Hma1.2p1_0223F.1_g094330 Hydrangea macrophylla HOM05D004907 ORTHO05D005707 1.7e-26 124.4 365 27.4
Sopen05g001160 Solanum pennellii HOM05D004907 ORTHO05D005707 2.3e-26 124.0 364 27.5
Cc11_g15390 Coffea canephora HOM05D004907 ORTHO05D005707 3.0e-26 123.6 367 30.8
Aqoxy3G02876 Aquilegia oxysepala HOM05D004907 ORTHO05D005707 3.9e-26 123.2 359 25.9
AT1G23390 Arabidopsis thaliana HOM05D004907 ORTHO05D005707 3.9e-26 123.2 341 29.6
Duzib268G1138 Durio zibethinus HOM05D004907 ORTHO05D005707 3.9e-26 123.2 358 27.4
Solyc05g005150.1 Solanum lycopersicum HOM05D004907 ORTHO05D005707 5.0e-26 122.9 364 27.2
MD16G1096400 Malus domestica HOM05D004907 ORTHO05D005707 6.6e-26 122.5 367 29.7
Os09g0292900 Oryza sativa ssp. japonica HOM05D004907 ORTHO05D005707 6.6e-26 122.5 389 32.1
Potri.010G042900 Populus trichocarpa HOM05D004907 ORTHO05D005707 6.6e-26 122.5 361 28.8
Zm00001eb155550 Zea mays HOM05D004907 ORTHO05D005707 8.6e-26 122.1 383 30.8
TWI36G0219 Tripterygium wilfordii HOM05D004907 ORTHO05D005707 1.1e-25 121.7 335 30.1
Thecc.02G254700 Theobroma cacao HOM05D004907 ORTHO05D005707 1.9e-25 120.9 354 29.1
CARHR023830 Cardamine hirsuta HOM05D004907 ORTHO05D005707 3.3e-25 120.2 369 27.4
PSO782G1891 Papaver somniferum HOM05D004907 ORTHO05D005707 4.3e-25 119.8 334 30.2
Gohir.A03G137500 Gossypium hirsutum HOM05D004907 ORTHO05D005707 7.3e-25 119.0 355 27.6
Actinidia27794 Actinidia chinensis HOM05D004907 ORTHO05D005707 9.5e-25 118.6 322 28.9
Glyma.18G141000 Glycine max HOM05D004907 ORTHO05D005707 9.5e-25 118.6 364 30.8
FAN22G1867 Fragaria x ananassa HOM05D004907 ORTHO05D005707 1.2e-24 118.2 353 30.6
Eucgr.H02548 Eucalyptus grandis HOM05D004907 ORTHO05D005707 1.6e-24 117.9 372 30.6
Eucgr.H02549 Eucalyptus grandis HOM05D004907 ORTHO05D005707 1.6e-24 117.9 373 31.6
PGR102G3060 Punica granatum HOM05D004907 ORTHO05D005707 1.6e-24 117.9 372 30.9
A09p41240 Brassica napus HOM05D004907 ORTHO05D005707 2.8e-24 117.1 336 28.0
BraA09t39619Z Brassica rapa HOM05D004907 ORTHO05D005707 2.8e-24 117.1 336 28.0
Glyma.08G284600 Glycine max HOM05D004907 ORTHO05D005707 3.6e-24 116.7 364 29.4
Gorai.005G180700 Gossypium raimondii HOM05D004907 ORTHO05D005707 3.6e-24 116.7 359 27.6
HanXRQChr06g0173591 Helianthus annuus HOM05D004907 ORTHO05D005707 4.7e-24 116.3 374 29.1
Carub.0001s2297 Capsella rubella HOM05D004907 ORTHO05D005707 6.2e-24 115.9 343 28.6
Psat5g210760 Pisum sativum HOM05D004907 ORTHO05D005707 6.2e-24 115.9 352 30.4
Migut.L01466 Erythranthe guttata HOM05D004907 ORTHO05D005707 8.0e-24 115.5 354 28.0
C05p22690 Brassica napus HOM05D004907 ORTHO05D005707 1.4e-23 114.8 335 28.1
Haze_12216 Corylus avellana HOM05D004907 ORTHO05D005707 1.4e-23 114.8 350 27.1
Medtr8g069800 Medicago truncatula HOM05D004907 ORTHO05D005707 1.4e-23 114.8 359 29.0
Sabra10G0024600 Salix brachista HOM05D004907 ORTHO05D005707 1.4e-23 114.8 361 28.5
BolC5t30967H Brassica oleracea HOM05D004907 ORTHO05D005707 5.2e-23 112.8 335 28.1
ClCG05G025500 Citrullus lanatus HOM05D004907 ORTHO05D005707 5.2e-23 112.8 350 27.4
BcaC05g26256 Brassica carinata HOM05D004907 ORTHO05D005707 6.8e-23 112.5 333 27.9
THA.LOC104822976 Tarenaya hassleriana HOM05D004907 ORTHO05D005707 6.8e-23 112.5 306 31.7
ClCG08G017860 Citrullus lanatus HOM05D002061 ORTHO05D005707 8.9e-23 112.1 369 28.5
Duzib268G1696 Durio zibethinus HOM05D004907 ORTHO05D005707 1.2e-22 111.7 349 28.9
Oeu001729.1 Olea europaea HOM05D004907 ORTHO05D005707 2.0e-22 110.9 361 26.0
TPR.G24774 Trifolium pratense HOM05D004907 ORTHO05D005707 2.0e-22 110.9 361 28.5
GSVIVG01013786001 Vitis vinifera HOM05D004907 ORTHO05D005707 7.5e-22 109.0 251 30.3
Oeu056415.1 Olea europaea HOM05D004907 ORTHO05D005707 1.3e-21 108.2 367 25.9
CsaV3_5G031400 Cucumis sativus L. HOM05D004907 ORTHO05D005707 2.2e-21 107.5 358 28.8
Ah.03g132850 Amaranthus hybridus HOM05D000168 ORTHO05D000811 4.9e-21 106.3 300 29.3
BcaB07g32334 Brassica carinata HOM05D004907 ORTHO05D005707 4.9e-21 106.3 340 28.2
Lj2g0022644 Lotus japonicus HOM05D004907 ORTHO05D005707 6.4e-21 105.9 344 29.9
Sp1g20830 Schrenkiella parvula HOM05D004907 ORTHO05D005707 6.4e-21 105.9 356 27.8
Glyma.02G036400 Glycine max HOM05D004907 ORTHO05D005707 1.1e-20 105.1 325 28.9
Dinv15270 Davidia involucrata HOM05D004907 ORTHO05D005707 1.4e-20 104.8 251 30.3
VMungo1215G1811 Vigna mungo HOM05D004907 ORTHO05D005707 1.4e-20 104.8 337 30.0
MELO3C011980.2 Cucumis melo HOM05D004907 ORTHO05D005707 3.2e-20 103.6 350 28.3
Medtr5g033880 Medicago truncatula HOM05D004907 ORTHO05D005707 3.2e-20 103.6 335 28.4
Sed0027759 Sechium edule HOM05D004907 ORTHO05D005707 5.4e-20 102.8 334 27.5
Sed0025966 Sechium edule HOM05D002061 ORTHO05D005707 9.2e-20 102.1 356 26.7
Gohir.A05G313700 Gossypium hirsutum HOM05D004907 ORTHO05D005707 1.6e-19 101.3 332 26.8
Thhalv10007835m.g Eutrema salsugineum HOM05D004907 ORTHO05D005707 2.0e-19 100.9 346 27.7
SalBow3G2985 Salvia bowleyana HOM05D004907 ORTHO05D005707 2.7e-19 100.5 214 32.7
MSTRG.2405 Avicennia marina HOM05D004907 ORTHO05D005707 3.5e-19 100.1 333 30.3
Psat2g106360 Pisum sativum HOM05D004907 ORTHO05D005707 3.5e-19 100.1 337 28.2
SalBow2G1155 Salvia bowleyana HOM05D004907 ORTHO05D005707 4.6e-19 99.8 361 25.8
Thecc.02G254800 Theobroma cacao HOM05D004907 ORTHO05D005707 4.6e-19 99.8 348 25.9
Ca_03137_v3 Cicer arietinum L. HOM05D004907 ORTHO05D005707 6.0e-19 99.4 343 28.3
Phvul.002G064500 Phaseolus vulgaris HOM05D004907 ORTHO05D005707 6.0e-19 99.4 261 31.8
Oeu056417.1 Olea europaea HOM05D004907 ORTHO05D005707 7.8e-19 99.0 364 25.5
ATR1091G111 Amborella trichopoda HOM05D004907 ORTHO05D005707 1.0e-18 98.6 323 26.6
Glyma.01G028800 Glycine max HOM05D004907 ORTHO05D005707 1.7e-18 97.8 327 26.9
Aa31LG7G7420 Aethionema arabicum HOM05D004907 ORTHO05D005707 3.0e-18 97.1 368 28.5
Medtr5g043750 Medicago truncatula HOM05D004907 ORTHO05D005707 3.0e-18 97.1 338 27.2
Os02g0465600 Oryza sativa ssp. japonica HOM05D004907 ORTHO05D005707 1.1e-17 95.1 241 34.4
Oeu055460.1 Olea europaea HOM05D004907 ORTHO05D005707 2.5e-17 94.0 359 25.6
Os01g0704300 Oryza sativa ssp. japonica HOM05D004907 ORTHO05D005707 3.3e-17 93.6 254 32.3
COL.COLO4_24215 Corchorus olitorius HOM05D004907 ORTHO05D005707 4.3e-17 93.2 238 31.5
Gohir.D05G315200 Gossypium hirsutum HOM05D004907 ORTHO05D005707 6.2e-16 89.4 226 30.1
PSO357G0455 Papaver somniferum HOM05D004907 ORTHO05D005707 8.1e-16 89.0 244 30.7
Gorai.009G337200 Gossypium raimondii HOM05D004907 ORTHO05D005707 2.3e-15 87.4 332 27.1
SGA_v2.0_scaffold63G21708 Striga asiatica HOM05D004907 ORTHO05D005707 3.4e-14 83.6 334 27.5
Nn3g16812 Nelumbo nucifera HOM05D004907 ORTHO05D005707 1.3e-13 81.6 179 34.6
Hund25371 Selenicereus undatus HOM05D004907 ORTHO05D005707 3.7e-13 80.1 356 25.3
EL10Ac6g13709 Beta vulgaris HOM05D004907 ORTHO05D005707 8.3e-13 79.0 187 27.8
Actinidia08149 Actinidia chinensis HOM05D004907 ORTHO05D005707 1.9e-12 77.8 212 28.3
Peaxi162Scf00158g00003 Petunia axillaris HOM05D004907 ORTHO05D005707 2.4e-12 77.4 191 28.8
COL.COLO4_24217 Corchorus olitorius HOM05D004907 ORTHO05D005707 3.2e-12 77.0 164 32.9
Oeu056728.1 Olea europaea HOM05D004907 ORTHO05D005707 3.2e-12 77.0 251 28.7
PSO478G2945 Papaver somniferum HOM05D004907 ORTHO05D005707 3.5e-11 73.6 170 34.7
Thhalv10002571m.g Eutrema salsugineum HOM05D007853 ORTHO05D009873 2.8e-08 63.9 346 24.0
MD13G1280300 Malus domestica HOM05D004907 ORTHO05D005707 1.5e-06 58.2 191 29.3
Nn2g13938 Nelumbo nucifera HOM05D004907 ORTHO05D005707 1.5e-06 58.2 90 41.1
Medtr0197s0070 Medicago truncatula HOM05D007853 ORTHO05D009873 5.8e-06 56.2 318 23.0
Medtr7g059040 Medicago truncatula HOM05D007853 ORTHO05D009873 5.8e-06 56.2 318 23.0
Lalb_Chr09g0326261 Lupinus albus HOM05D004907 ORTHO05D005707 7.6e-06 55.8 155 30.3


User provided reference genes

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