Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 1.9e-156 555.8 281 100.0
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 2.2e-125 452.6 262 83.6
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 1.1e-121 440.3 272 80.9
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 1.5e-121 439.9 263 80.6
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.3e-120 436.8 276 78.3
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 2.1e-120 436.0 258 82.9
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 3.7e-120 435.3 256 82.4
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 4.8e-120 434.9 260 81.2
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 4.8e-120 434.9 258 81.8
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 8.2e-120 434.1 260 81.2
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 8.2e-120 434.1 255 83.9
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 3.1e-119 432.2 267 80.5
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 3.1e-119 432.2 263 79.8
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 5.3e-119 431.4 260 80.8
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 5.3e-119 431.4 275 76.7
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 2.0e-118 429.5 260 80.0
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 2.0e-118 429.5 267 80.9
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 2.0e-118 429.5 264 81.4
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 2.6e-118 429.1 257 81.7
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 4.5e-118 428.3 257 80.9
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 4.5e-118 428.3 258 81.8
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 7.6e-118 427.6 267 79.4
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 7.6e-118 427.6 270 78.1
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 1.3e-117 426.8 258 81.0
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 2.2e-117 426.0 259 81.1
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 2.2e-117 426.0 258 80.2
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 2.9e-117 425.6 259 80.7
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 3.8e-117 425.2 268 79.1
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 8.4e-117 424.1 267 79.0
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 1.1e-116 423.7 252 81.7
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 1.1e-116 423.7 261 80.8
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 1.9e-116 422.9 257 81.3
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 1.9e-116 422.9 260 80.0
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 4.2e-116 421.8 262 77.9
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 9.3e-116 420.6 262 77.9
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 1.2e-115 420.2 263 78.3
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 2.1e-115 419.5 260 78.8
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 2.7e-115 419.1 263 77.9
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 3.5e-115 418.7 263 79.5
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 4.6e-115 418.3 257 82.5
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 7.9e-115 417.5 262 79.8
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.8e-114 416.4 262 77.5
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 2.3e-114 416.0 263 79.1
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 3.0e-114 415.6 261 78.2
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 6.7e-114 414.5 262 79.4
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 8.7e-114 414.1 272 77.2
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 1.1e-113 413.7 263 75.3
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 4.3e-113 411.8 260 77.7
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 7.4e-113 411.0 259 78.0
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 7.4e-113 411.0 260 75.8
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 9.6e-113 410.6 257 76.7
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 1.3e-112 410.2 258 79.5
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 3.7e-112 408.7 260 77.3
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 1.8e-111 406.4 265 77.0
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 2.4e-111 406.0 264 76.5
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 4.1e-111 405.2 259 77.6
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 4.1e-111 405.2 259 74.9
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 6.9e-111 404.4 242 81.4
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 1.2e-110 403.7 255 76.1
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 2.0e-110 402.9 256 76.6
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 2.6e-110 402.5 267 75.3
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 3.4e-110 402.1 269 75.8
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 4.5e-110 401.7 244 79.1
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 2.9e-109 399.1 267 74.5
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 3.8e-109 398.7 244 79.1
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 5.0e-109 398.3 255 74.9
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 2.5e-108 396.0 255 77.6
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 2.1e-107 392.9 255 74.5
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 3.6e-107 392.1 241 78.8
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 7.4e-105 384.4 266 76.7
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 5.0e-101 371.7 266 69.2
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 1.4e-100 370.2 234 77.4
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 1.4e-100 370.2 223 82.1
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 1.6e-99 366.7 217 82.5
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 1.6e-99 366.7 246 73.6
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 2.1e-99 366.3 263 68.8
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 3.6e-99 365.5 241 74.7
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 1.8e-98 363.2 251 70.9
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 6.7e-98 361.3 263 67.7
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 1.5e-97 360.1 240 74.6
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 1.5e-97 360.1 240 74.6
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 2.0e-97 359.8 246 72.4
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 2.6e-97 359.4 240 74.2
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 2.6e-97 359.4 246 71.5
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 4.4e-97 358.6 246 72.0
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 4.4e-97 358.6 246 72.0
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 5.7e-97 358.2 244 73.4
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 5.7e-97 358.2 247 73.3
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 5.7e-97 358.2 246 72.4
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 1.7e-96 356.7 216 80.6
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 2.8e-96 355.9 246 69.5
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 4.8e-96 355.1 247 72.1
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 8.2e-96 354.4 247 72.1
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 6.5e-93 344.7 221 76.9
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 3.6e-91 339.0 218 77.1
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 1.8e-90 336.7 219 78.1
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 2.6e-89 332.8 291 62.5
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 4.1e-87 325.5 240 69.6
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 5.3e-87 325.1 201 80.6
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 5.3e-87 325.1 202 81.2
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 9.1e-87 324.3 201 81.1
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 1.6e-86 323.6 241 68.0
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 4.5e-86 322.0 237 67.1
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 5.5e-84 315.1 252 63.5
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 5.7e-81 305.1 180 81.7
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 5.7e-81 305.1 243 63.0
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 9.1e-79 297.7 219 68.5
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 3.8e-77 292.4 247 62.3
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 9.8e-73 277.7 228 64.0
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 5.4e-71 271.9 267 58.4
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 2.9e-69 266.2 240 57.9
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 3.4e-65 252.7 249 57.4
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 1.2e-54 217.6 130 82.3
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 2.7e-54 216.5 289 45.3
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 1.1e-47 194.5 116 79.3
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 4.0e-42 176.0 118 70.3
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 3.0e-37 159.8 112 69.6
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 5.6e-36 155.6 95 73.7
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 4.4e-33 146.0 86 79.1
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.0e-29 134.8 91 70.3
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.9e-28 130.6 78 79.5
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 6.2e-11 72.4 64 60.9
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 3.4e-09 66.6 44 68.2
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 4.5e-09 66.2 45 68.9


User provided reference genes

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