Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006866 Vanilla planifolia HOM05D003214 ORTHO05D004330 1.3e-274 949.1 467 100.0
HPP92_006849 Vanilla planifolia HOM05D003214 ORTHO05D004330 2.5e-246 855.1 428 99.1
Nn1g08447 Nelumbo nucifera HOM05D003214 ORTHO05D004330 5.2e-204 714.5 423 81.3
Aqoxy5G01104 Aquilegia oxysepala HOM05D003214 ORTHO05D004330 4.9e-202 708.0 423 80.9
Hma1.2p1_0144F.1_g064770 Hydrangea macrophylla HOM05D003214 ORTHO05D004330 5.0e-199 698.0 422 79.4
Gorai.002G200500 Gossypium raimondii HOM05D003214 ORTHO05D004330 6.6e-199 697.6 424 79.7
Gohir.D01G161600 Gossypium hirsutum HOM05D003214 ORTHO05D004330 8.6e-199 697.2 423 79.4
Oeu031591.4 Olea europaea HOM05D003214 ORTHO05D004330 8.6e-199 697.2 425 78.4
GSVIVG01023974001 Vitis vinifera HOM05D003214 ORTHO05D004330 8.6e-199 697.2 423 80.4
Duzib052G0573 Durio zibethinus HOM05D003214 ORTHO05D004330 7.3e-198 694.1 423 79.0
Gohir.A01G170600 Gossypium hirsutum HOM05D003214 ORTHO05D004330 7.3e-198 694.1 423 79.7
COL.COLO4_17378 Corchorus olitorius HOM05D003214 ORTHO05D004330 1.2e-197 693.3 423 79.2
Migut.E01296 Erythranthe guttata HOM05D003214 ORTHO05D004330 2.1e-197 692.6 423 79.0
ECA196G0013 Erigeron canadensis HOM05D003214 ORTHO05D004330 2.8e-197 692.2 423 78.7
Manes.11G097900 Manihot esculenta HOM05D003214 ORTHO05D004330 4.7e-197 691.4 423 79.0
Thecc.02G055400 Theobroma cacao HOM05D003214 ORTHO05D004330 6.1e-197 691.0 423 79.0
RcHm_v2.0_Chr6g0278851 Rosa chinensis HOM05D003214 ORTHO05D004330 1.4e-196 689.9 423 78.7
TWI75G1738 Tripterygium wilfordii HOM05D003214 ORTHO05D004330 1.4e-196 689.9 423 78.5
CSS0041068 Camellia sinensis var. sinensis HOM05D003214 ORTHO05D004330 1.8e-196 689.5 423 78.7
Cfa005285 Carpinus fangiana HOM05D003214 ORTHO05D004330 2.3e-196 689.1 423 79.0
Ciclev10027778m.g Citrus clementina HOM05D003214 ORTHO05D004330 3.1e-196 688.7 422 79.1
vmacro02292 Vaccinium macrocarpon HOM05D003214 ORTHO05D004330 4.0e-196 688.3 423 79.0
MSTRG.12021 Avicennia marina HOM05D003214 ORTHO05D004330 6.8e-196 687.6 424 77.8
FvH4_2g15650 Fragaria vesca HOM05D003214 ORTHO05D004330 6.8e-196 687.6 428 77.8
Prupe.8G169000 Prunus persica HOM05D003214 ORTHO05D004330 8.9e-196 687.2 426 78.6
FAN24G0254 Fragaria x ananassa HOM05D003214 ORTHO05D004330 3.4e-195 685.3 426 77.7
HanXRQChr04g0110121 Helianthus annuus HOM05D003214 ORTHO05D004330 3.4e-195 685.3 423 78.5
CiPaw.05G085300 Carya illinoinensis HOM05D003214 ORTHO05D004330 4.4e-195 684.9 423 77.3
QL01p046809 Quercus lobata HOM05D003214 ORTHO05D004330 9.8e-195 683.7 464 73.5
PSO675G3496 Papaver somniferum HOM05D003214 ORTHO05D004330 1.3e-194 683.3 428 78.0
CSS0005434 Camellia sinensis var. sinensis HOM05D003214 ORTHO05D004330 1.7e-194 682.9 425 76.9
ClCG02G012090 Citrullus lanatus HOM05D003214 ORTHO05D004330 2.2e-194 682.6 423 77.1
Solyc01g111780.4 Solanum lycopersicum HOM05D003214 ORTHO05D004330 2.2e-194 682.6 424 78.8
Sopen01g053820 Solanum pennellii HOM05D003214 ORTHO05D004330 2.2e-194 682.6 424 78.8
SGA_v2.0_scaffold196G40882 Striga asiatica HOM05D003214 ORTHO05D004330 4.9e-194 681.4 423 77.1
CAN.G588.99 Capsicum annuum HOM05D003214 ORTHO05D004330 6.4e-194 681.0 423 78.0
CiPaw.06G120100 Carya illinoinensis HOM05D003214 ORTHO05D004330 6.4e-194 681.0 423 77.1
FAN15G1272 Fragaria x ananassa HOM05D003214 ORTHO05D004330 6.4e-194 681.0 428 77.3
FAN20G2853 Fragaria x ananassa HOM05D003214 ORTHO05D004330 6.4e-194 681.0 428 77.3
TAR625G1234 Trochodendron aralioides HOM05D003214 ORTHO05D004330 6.4e-194 681.0 409 80.7
CsaV3_2G016250 Cucumis sativus L. HOM05D003214 ORTHO05D004330 8.3e-194 680.6 422 77.5
PSO210G6165 Papaver somniferum HOM05D003214 ORTHO05D004330 8.3e-194 680.6 425 77.4
HanXRQChr02g0040581 Helianthus annuus HOM05D003214 ORTHO05D004330 1.4e-193 679.9 423 78.3
FAN27G1670 Fragaria x ananassa HOM05D003214 ORTHO05D004330 1.9e-193 679.5 428 77.3
Cc09_g10320 Coffea canephora HOM05D003214 ORTHO05D004330 2.4e-193 679.1 422 78.2
Atru.chr5.3440 Acer truncatum HOM05D003214 ORTHO05D004330 5.4e-193 677.9 423 78.3
arahy.Tifrunner.gnm1.ann1.47PMEA Arachis hypogaea HOM05D003214 ORTHO05D004330 7.0e-193 677.6 428 77.6
Sc15g0002120 Simmondsia chinensis HOM05D003214 ORTHO05D004330 7.0e-193 677.6 425 76.2
VMungo0720G0502 Vigna mungo HOM05D003214 ORTHO05D004330 1.2e-192 676.8 423 77.8
PSO170G1418 Papaver somniferum HOM05D003214 ORTHO05D004330 2.0e-192 676.0 425 76.9
Potri.009G138200 Populus trichocarpa HOM05D003214 ORTHO05D004330 3.5e-192 675.2 424 77.1
Lsat_1_v5_gn_1_6760 Lactuca sativa HOM05D003214 ORTHO05D004330 4.6e-192 674.9 413 79.2
MD05G1125000 Malus domestica HOM05D003214 ORTHO05D004330 4.6e-192 674.9 429 77.6
TWI31G0460 Tripterygium wilfordii HOM05D003214 ORTHO05D004330 6.0e-192 674.5 424 76.9
Actinidia18041 Actinidia chinensis HOM05D003214 ORTHO05D004330 1.0e-191 673.7 423 77.1
arahy.Tifrunner.gnm1.ann1.L5LJLM Arachis hypogaea HOM05D003214 ORTHO05D004330 1.0e-191 673.7 423 77.5
Lalb_Chr21g0307001 Lupinus albus HOM05D003214 ORTHO05D004330 1.0e-191 673.7 423 77.5
Glyma.20G106300 Glycine max HOM05D003214 ORTHO05D004330 2.3e-191 672.5 424 77.6
MD10G1127800 Malus domestica HOM05D003214 ORTHO05D004330 6.6e-191 671.0 429 76.7
Potri.004G177700 Populus trichocarpa HOM05D003214 ORTHO05D004330 6.6e-191 671.0 424 77.4
Lalb_Chr02g0143501 Lupinus albus HOM05D003214 ORTHO05D004330 1.5e-190 669.8 423 77.1
Zm00001eb434450 Zea mays HOM05D003214 ORTHO05D004330 1.5e-190 669.8 425 74.8
Sabra04G0119600 Salix brachista HOM05D003214 ORTHO05D004330 1.9e-190 669.5 424 77.6
Glyma.10G283400 Glycine max HOM05D003214 ORTHO05D004330 3.3e-190 668.7 424 77.4
Medtr1g112920 Medicago truncatula HOM05D003214 ORTHO05D004330 3.3e-190 668.7 423 76.6
CANSAT25G3225 Cannabis sativa HOM05D003214 ORTHO05D004330 5.6e-190 667.9 423 75.9
Haze_02105 Corylus avellana HOM05D003214 ORTHO05D004330 5.6e-190 667.9 463 71.9
Actinidia20525 Actinidia chinensis HOM05D003214 ORTHO05D004330 7.3e-190 667.5 423 76.6
Phvul.007G017800 Phaseolus vulgaris HOM05D003214 ORTHO05D004330 7.3e-190 667.5 428 77.1
Sed0023751 Sechium edule HOM05D003214 ORTHO05D004330 7.3e-190 667.5 424 76.7
Rhsim11G0193600 Rhododendron simsii HOM05D003214 ORTHO05D004330 2.8e-189 665.6 465 71.2
MSTRG.13818 Avicennia marina HOM05D003214 ORTHO05D004330 8.0e-189 664.1 425 77.4
Ca_03296_v3 Cicer arietinum L. HOM05D003214 ORTHO05D004330 8.0e-189 664.1 423 76.6
Dinv14126 Davidia involucrata HOM05D003214 ORTHO05D004330 1.4e-188 663.3 399 79.9
Peaxi162Scf00078g01329 Petunia axillaris HOM05D003214 ORTHO05D004330 2.3e-188 662.5 450 72.7
TPR.G2434 Trifolium pratense HOM05D003214 ORTHO05D004330 3.1e-188 662.1 421 76.5
Psat6g232040 Pisum sativum HOM05D003214 ORTHO05D004330 4.0e-188 661.8 423 76.6
THA.LOC104819659 Tarenaya hassleriana HOM05D003214 ORTHO05D004330 5.2e-188 661.4 423 75.4
Zm00001eb076490 Zea mays HOM05D003214 ORTHO05D004330 1.2e-187 660.2 426 75.4
GSVIVG01008744001 Vitis vinifera HOM05D003214 ORTHO05D004330 2.6e-187 659.1 425 74.6
Lj5g0003348 Lotus japonicus HOM05D003214 ORTHO05D004330 1.3e-186 656.8 423 75.4
Eucgr.F03709 Eucalyptus grandis HOM05D003214 ORTHO05D004330 2.2e-186 656.0 423 75.4
THA.LOC104804319 Tarenaya hassleriana HOM05D003214 ORTHO05D004330 1.9e-185 652.9 446 72.2
Duzib093G0144 Durio zibethinus HOM05D003214 ORTHO05D004330 2.4e-185 652.5 423 73.8
Manes.05G143000 Manihot esculenta HOM05D003214 ORTHO05D004330 9.2e-185 650.6 422 74.2
SalBow1G8529 Salvia bowleyana HOM05D003214 ORTHO05D004330 1.2e-184 650.2 400 77.8
Gohir.A01G002000 Gossypium hirsutum HOM05D003214 ORTHO05D004330 6.0e-184 647.9 424 74.1
Gorai.002G002200 Gossypium raimondii HOM05D003214 ORTHO05D004330 6.0e-184 647.9 424 74.3
EL10Ac8g18581 Beta vulgaris HOM05D003214 ORTHO05D004330 1.3e-183 646.7 449 70.6
Gohir.D01G001600 Gossypium hirsutum HOM05D003214 ORTHO05D004330 1.3e-183 646.7 424 74.3
PGR142G0610 Punica granatum HOM05D003214 ORTHO05D004330 5.1e-183 644.8 423 73.5
SEGI_16409 Sequoiadendron giganteum HOM05D003214 ORTHO05D004330 5.1e-183 644.8 423 74.2
Thecc.08G051200 Theobroma cacao HOM05D003214 ORTHO05D004330 5.6e-182 641.3 423 72.3
Thhalv10022538m.g Eutrema salsugineum HOM05D003214 ORTHO05D004330 1.7e-178 629.8 421 72.2
unitig_21.g20525 Utricularia gibba HOM05D003214 ORTHO05D004330 2.9e-178 629.0 420 72.6
Carub.0003s3076 Capsella rubella HOM05D003214 ORTHO05D004330 4.9e-178 628.2 421 71.7
Sabra09G0107100 Salix brachista HOM05D003214 ORTHO05D004330 1.4e-177 626.7 502 64.3
AL3G49700 Arabidopsis lyrata HOM05D003214 ORTHO05D004330 1.9e-177 626.3 421 71.7
Mapoly0057s0097 Marchantia polymorpha HOM05D003214 ORTHO05D004330 1.9e-177 626.3 424 72.9
AUR62033441 Chenopodium quinoa HOM05D003214 ORTHO05D004330 2.4e-177 625.9 398 74.4
AUR62011064 Chenopodium quinoa HOM05D003214 ORTHO05D004330 7.1e-177 624.4 398 74.1
BcaC04g23002 Brassica carinata HOM05D003214 ORTHO05D004330 1.2e-176 623.6 446 68.2
A07p04130 Brassica napus HOM05D003214 ORTHO05D004330 1.2e-176 623.6 418 71.3
C09p13150 Brassica napus HOM05D003214 ORTHO05D004330 1.2e-176 623.6 446 68.2
A09p11160 Brassica napus HOM05D003214 ORTHO05D004330 4.6e-176 621.7 446 68.2
BcaB08g34680 Brassica carinata HOM05D003214 ORTHO05D004330 7.8e-176 620.9 421 70.8
BcaC06g36202 Brassica carinata HOM05D003214 ORTHO05D004330 7.8e-176 620.9 418 71.3
C07p06530 Brassica napus HOM05D003214 ORTHO05D004330 7.8e-176 620.9 418 71.3
BolC7t41074H Brassica oleracea HOM05D003214 ORTHO05D004330 7.8e-176 620.9 418 71.3
CARHR107250 Cardamine hirsuta HOM05D003214 ORTHO05D004330 1.0e-175 620.5 421 71.0
AT2G16950 Arabidopsis thaliana HOM05D003214 ORTHO05D004330 1.3e-175 620.2 421 71.0
A03p46190 Brassica napus HOM05D003214 ORTHO05D004330 1.7e-175 619.8 421 71.0
BcaB03g16429 Brassica carinata HOM05D003214 ORTHO05D004330 2.3e-175 619.4 418 71.1
CDE08G0902 Ceratophyllum demersum HOM05D003214 ORTHO05D004330 2.3e-175 619.4 431 71.2
Sp3g30230 Schrenkiella parvula HOM05D003214 ORTHO05D004330 2.3e-175 619.4 421 71.0
CDE06G1850 Ceratophyllum demersum HOM05D003214 ORTHO05D004330 1.1e-174 617.1 415 72.8
BcaC01g02966 Brassica carinata HOM05D003214 ORTHO05D004330 1.5e-174 616.7 421 70.8
BraA07t28204Z Brassica rapa HOM05D003214 ORTHO05D004330 1.5e-174 616.7 429 69.7
C03p57710 Brassica napus HOM05D003214 ORTHO05D004330 1.9e-174 616.3 421 70.8
Pp3c27_5090 Physcomitrium patens HOM05D003214 ORTHO05D004330 7.3e-174 614.4 421 72.2
Aa31LG8G14130 Aethionema arabicum HOM05D003214 ORTHO05D004330 1.2e-173 613.6 426 70.4
Sed0004428 Sechium edule HOM05D003214 ORTHO05D004330 1.6e-173 613.2 421 70.1
BraA09t36758Z Brassica rapa HOM05D003214 ORTHO05D004330 2.8e-173 612.5 459 66.2
MELO3C020836.2 Cucumis melo HOM05D003214 ORTHO05D004330 2.8e-173 612.5 374 78.6
Ah.13g069540 Amaranthus hybridus HOM05D003214 ORTHO05D004330 3.6e-173 612.1 395 75.7
BolC9t54210H Brassica oleracea HOM05D003214 ORTHO05D004330 4.0e-172 608.6 459 66.4
Pp3c5_4970 Physcomitrium patens HOM05D003214 ORTHO05D004330 4.0e-172 608.6 423 70.9
Pp3c16_4650 Physcomitrium patens HOM05D003214 ORTHO05D004330 1.5e-171 606.7 421 71.3
BraA03t13744Z Brassica rapa HOM05D003214 ORTHO05D004330 6.4e-170 601.3 444 67.1
Lj5A176G61 Lonicera japonica HOM05D003214 ORTHO05D004330 9.3e-169 597.4 435 69.7
PGR031G2444 Punica granatum HOM05D003214 ORTHO05D004330 1.1e-166 590.5 425 67.5
SMO174G0083 Selaginella moellendorffii HOM05D003214 ORTHO05D004330 2.6e-163 579.3 418 67.9
Nitab4.5_0000079g0220 Nicotiana tabacum HOM05D003214 ORTHO05D004330 3.2e-161 572.4 428 66.8
CBR_g22065 Chara braunii HOM05D003214 ORTHO05D004330 4.6e-160 568.5 420 66.9
Pp3c6_18200 Physcomitrium patens HOM05D003214 ORTHO05D004330 3.9e-159 565.5 421 68.2
Nn5g27766 Nelumbo nucifera HOM05D003214 ORTHO05D004330 8.7e-159 564.3 425 67.8
Nitab4.5_0004867g0010 Nicotiana tabacum HOM05D003214 ORTHO05D004330 1.3e-157 560.5 346 78.0
Nitab4.5_0009111g0010 Nicotiana tabacum HOM05D003214 ORTHO05D004330 1.2e-136 490.7 369 66.4
DCAR_022960 Daucus carota HOM05D003214 ORTHO05D004330 4.6e-136 488.8 428 60.5
Gohir.A03G205850 Gossypium hirsutum HOM05D003214 ORTHO05D004330 3.0e-135 486.1 425 59.1
Gorai.005G255100 Gossypium raimondii HOM05D003214 ORTHO05D004330 5.7e-134 481.9 425 58.6
Dinv41918 Davidia involucrata HOM05D003214 ORTHO05D004330 5.1e-127 458.8 270 83.0
Atru.chr13.222 Acer truncatum HOM05D003214 ORTHO05D004330 6.3e-125 451.8 296 72.6
Os04g0691500 Oryza sativa ssp. japonica HOM05D003214 ORTHO05D004330 1.2e-123 447.6 272 79.0
AagrBONN_evm.TU.Sc2ySwM_228.2863 Anthoceros agrestis HOM05D003214 ORTHO05D004330 1.5e-118 430.6 301 71.8
Gohir.D02G227200 Gossypium hirsutum HOM05D003214 ORTHO05D004330 6.5e-114 415.2 424 53.3
AL3G49720 Arabidopsis lyrata HOM05D003214 ORTHO05D004330 9.7e-110 401.4 380 53.2
Haze_26729 Corylus avellana HOM05D003214 ORTHO05D004330 1.0e-106 391.3 413 47.9
TAR376G0505 Trochodendron aralioides HOM05D003214 ORTHO05D004330 1.7e-98 364.0 236 75.8
Carub.0003s3078 Capsella rubella HOM05D003214 ORTHO05D004330 2.1e-96 357.1 334 54.8
Carub.0003s3079 Capsella rubella HOM05D003214 ORTHO05D004330 3.4e-94 349.7 425 44.5
Peaxi162Scf00362g00439 Petunia axillaris HOM05D003214 ORTHO05D004330 2.5e-89 333.6 425 47.1
AT2G16960 Arabidopsis thaliana HOM05D003214 ORTHO05D004330 1.2e-83 314.7 429 43.4
Cre12.g520550 Chlamydomonas reinhardtii HOM05D003214 ORTHO05D004330 7.5e-78 295.4 477 37.1
Nitab4.5_0003698g0020 Nicotiana tabacum HOM05D003214 ORTHO05D004330 1.7e-69 267.7 361 45.2
COL.COLO4_26088 Corchorus olitorius HOM05D003214 ORTHO05D004330 1.6e-67 261.2 247 56.3
MCO12G350 Micromonas commoda HOM05D003214 ORTHO05D004330 6.6e-66 255.8 399 37.6
DCAR_001344 Daucus carota HOM05D003214 ORTHO05D004330 4.4e-62 243.0 171 73.1
PRCOL_00003157 Prasinoderma coloniale HOM05D003214 ORTHO05D004330 4.4e-62 243.0 427 34.4
DCAR_001345 Daucus carota HOM05D003214 ORTHO05D004330 1.3e-61 241.5 171 72.5
A05p24600 Brassica napus HOM05D003214 ORTHO05D033598 7.1e-52 209.1 123 80.5
BraA05t21345Z Brassica rapa HOM05D003214 ORTHO05D033598 2.7e-51 207.2 123 79.7
Cpa.g.sc7210.1 Carica papaya HOM05D003214 ORTHO05D004330 5.1e-42 176.4 102 86.3
PSO210G0009 Papaver somniferum HOM05D003214 ORTHO05D013834 2.5e-33 147.5 175 48.6
Atru.chr13.221 Acer truncatum HOM05D003214 ORTHO05D004330 5.6e-33 146.4 102 64.7
Haze_20015 Corylus avellana HOM05D003214 ORTHO05D044808 2.4e-31 141.0 185 47.0
CsaV3_2G013910 Cucumis sativus L. HOM05D003214 ORTHO05D044808 4.2e-28 130.2 137 54.0
Cpa.g.sc20.113 Carica papaya HOM05D003214 ORTHO05D004330 2.8e-24 117.5 64 87.5
Nn3g21113 Nelumbo nucifera HOM05D003214 ORTHO05D004330 2.6e-22 110.9 69 72.5
Lsat_1_v5_gn_9_73520 Lactuca sativa HOM05D003214 ORTHO05D004330 3.2e-20 104.0 217 34.6
ATR0665G341 Amborella trichopoda HOM05D003214 ORTHO05D004330 5.1e-18 96.7 73 61.6
Peaxi162Scf00362g00438 Petunia axillaris HOM05D003214 ORTHO05D004330 2.0e-14 84.7 94 54.3
VMungo1127G1914 Vigna mungo HOM05D003214 ORTHO05D023725 3.9e-10 70.5 96 47.9
Gohir.D11G257966 Gossypium hirsutum HOM05D003214 ORTHO05D003503 1.4e-07 62.0 75 48.0
Gohir.D11G114700 Gossypium hirsutum HOM05D003878 ORTHO05D003857 2.4e-07 61.2 47 63.8
Nitab4.5_0004867g0020 Nicotiana tabacum HOM05D003214 ORTHO05D004330 1.5e-06 58.5 69 44.9


User provided reference genes

Program Settings