Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 6.5e-199 697.2 353 100.0
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 1.0e-135 487.3 347 72.3
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 1.9e-134 483.0 347 72.6
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 9.5e-134 480.7 347 70.6
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 2.8e-133 479.2 348 71.8
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.6e-133 478.8 349 70.5
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.4e-132 476.9 349 70.5
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 3.1e-132 475.7 347 68.6
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 5.2e-132 474.9 322 71.7
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 8.9e-132 474.2 349 70.5
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 8.9e-132 474.2 324 73.5
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 1.2e-131 473.8 347 70.3
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.5e-131 473.4 349 70.5
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 2.0e-131 473.0 348 70.7
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 2.0e-131 473.0 348 70.7
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.4e-131 472.2 344 70.3
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 4.4e-131 471.9 349 69.6
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 5.8e-131 471.5 347 69.7
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 7.6e-131 471.1 352 68.5
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 7.6e-131 471.1 351 69.5
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 7.6e-131 471.1 348 70.4
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 7.6e-131 471.1 347 70.0
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 2.2e-130 469.5 347 69.5
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 6.4e-130 468.0 352 69.0
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 8.4e-130 467.6 344 69.2
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 8.4e-130 467.6 350 69.1
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 1.1e-129 467.2 347 69.5
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 1.1e-129 467.2 349 68.2
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.4e-129 466.8 347 70.6
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.4e-129 466.1 323 71.8
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 2.4e-129 466.1 350 68.9
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 4.1e-129 465.3 347 68.9
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 5.4e-129 464.9 347 68.6
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 7.1e-129 464.5 344 69.2
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 7.1e-129 464.5 344 68.9
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 7.1e-129 464.5 347 68.9
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 9.2e-129 464.2 349 69.9
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.6e-128 463.4 322 72.4
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.6e-128 463.4 350 67.4
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.7e-128 462.6 353 67.4
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 2.7e-128 462.6 351 66.7
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 6.0e-128 461.5 350 66.0
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 6.0e-128 461.5 351 66.7
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.7e-127 459.9 359 66.6
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 3.0e-127 459.1 345 69.3
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 3.9e-127 458.8 355 67.3
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 3.9e-127 458.8 347 70.0
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 6.6e-127 458.0 323 71.2
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 1.1e-126 457.2 329 69.6
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.5e-126 456.8 347 69.5
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 2.5e-126 456.1 348 66.4
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 7.3e-126 454.5 323 72.4
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 2.8e-125 452.6 378 63.8
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 3.6e-125 452.2 322 70.8
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 3.6e-125 452.2 349 65.6
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 4.7e-125 451.8 323 70.6
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 4.7e-125 451.8 349 65.6
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 6.2e-125 451.4 347 67.1
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 6.2e-125 451.4 324 70.4
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 6.2e-125 451.4 310 71.0
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 8.1e-125 451.1 352 68.2
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 8.1e-125 451.1 352 66.8
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 8.1e-125 451.1 325 70.2
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 1.1e-124 450.7 325 69.8
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.8e-124 449.9 347 65.7
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 4.0e-124 448.7 350 67.1
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 6.9e-124 448.0 334 70.1
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 6.9e-124 448.0 361 66.2
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 8.9e-124 447.6 322 69.3
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 8.9e-124 447.6 350 67.7
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.2e-123 447.2 348 67.5
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 1.5e-123 446.8 324 68.5
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 2.6e-123 446.0 345 68.4
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 3.4e-123 445.7 338 70.4
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 5.8e-123 444.9 351 67.2
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 5.8e-123 444.9 350 66.3
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 7.6e-123 444.5 348 66.7
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 9.9e-123 444.1 324 69.4
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 1.7e-122 443.4 344 65.1
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 2.2e-122 443.0 299 72.6
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 2.2e-122 443.0 347 67.7
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 2.9e-122 442.6 332 67.8
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 4.9e-122 441.8 374 61.8
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.9e-121 439.9 358 65.4
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 2.4e-121 439.5 352 65.1
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 3.2e-121 439.1 325 69.2
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 4.2e-121 438.7 322 68.6
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 4.2e-121 438.7 345 66.4
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 5.4e-121 438.3 350 65.7
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 9.3e-121 437.6 334 66.5
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 9.3e-121 437.6 322 67.7
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 1.2e-120 437.2 334 65.9
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.7e-120 436.0 322 68.9
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 3.5e-120 435.6 324 68.5
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 6.0e-120 434.9 336 65.2
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.0e-119 434.1 324 68.5
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 1.0e-119 434.1 346 66.2
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 1.3e-119 433.7 347 64.8
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 2.3e-119 433.0 346 65.9
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 3.9e-119 432.2 328 65.2
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 5.1e-119 431.8 324 68.2
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 5.1e-119 431.8 310 69.7
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.9e-118 429.9 354 62.1
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 2.5e-118 429.5 388 59.8
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 4.3e-118 428.7 323 67.2
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 1.3e-117 427.2 310 69.4
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 1.3e-117 427.2 333 65.2
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.1e-117 426.4 403 58.8
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 2.8e-117 426.0 323 66.9
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 4.8e-117 425.2 330 65.5
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 6.2e-117 424.9 341 65.7
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 6.2e-117 424.9 323 67.5
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 4.0e-116 422.2 342 65.2
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.5e-115 420.2 310 69.0
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 9.9e-115 417.5 323 63.8
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 1.7e-114 416.8 323 66.6
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 4.9e-114 415.2 356 61.0
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 2.4e-113 412.9 349 63.3
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 3.2e-113 412.5 262 76.7
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 7.9e-112 407.9 321 65.1
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.3e-111 407.1 311 66.9
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 6.7e-111 404.8 351 62.7
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 4.8e-109 398.7 325 63.1
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.7e-106 390.2 353 60.3
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 1.4e-105 387.1 260 72.3
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 5.5e-105 385.2 349 59.6
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 1.6e-101 373.6 290 70.0
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 2.8e-101 372.9 541 42.7
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 8.2e-101 371.3 280 70.4
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.1e-97 360.9 332 59.9
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 1.1e-94 350.9 349 57.0
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 1.0e-90 337.8 227 74.4
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 2.2e-90 336.7 322 54.7
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 2.5e-89 333.2 323 54.8
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 2.4e-84 316.6 275 60.7
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 7.2e-81 305.1 293 52.9
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 6.1e-80 302.0 193 74.6
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 1.8e-79 300.4 268 59.3
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 3.0e-79 299.7 209 70.3
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 5.7e-78 295.4 213 68.1
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 5.7e-78 295.4 198 74.2
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.5e-75 287.3 234 65.0
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 9.1e-68 261.5 163 78.5
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 1.5e-62 244.2 372 39.8
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 5.0e-58 229.2 191 63.4
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 3.2e-57 226.5 156 69.2
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.0e-55 221.5 191 62.3
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 6.3e-53 212.2 168 65.5
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.4e-52 211.1 207 56.0
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 3.1e-52 209.9 160 66.2
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 2.6e-46 190.3 326 39.6
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 4.1e-44 183.0 257 42.8
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 2.8e-40 170.2 191 50.8
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 6.6e-34 149.1 150 56.7
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 1.4e-31 141.4 109 69.7
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 4.1e-28 129.8 299 34.1
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 2.0e-27 127.5 306 33.0
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 5.0e-26 122.9 382 29.8
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.9e-25 120.9 72 79.2
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 7.5e-22 109.0 125 46.4
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.6e-19 101.3 127 45.7
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.5e-17 94.0 57 73.7
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 2.1e-16 90.9 58 70.7
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.1e-16 90.9 61 75.4
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 7.6e-14 82.4 59 66.1
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 2.9e-13 80.5 102 47.1
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 2.6e-06 57.4 84 47.6


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