Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 0.0e+00 1788.9 901 100.0
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 4.1e-173 612.8 979 39.4
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 1.2e-172 611.3 951 40.3
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 4.7e-169 599.4 1022 37.0
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 5.2e-168 595.9 984 39.6
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 7.5e-167 592.0 988 39.4
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 7.5e-167 592.0 986 39.1
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 1.7e-166 590.9 971 39.2
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 4.9e-166 589.3 979 38.3
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 6.3e-166 589.0 991 39.8
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 1.6e-164 584.3 857 40.3
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 5.9e-164 582.4 982 37.4
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 3.1e-160 570.1 993 38.0
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 1.5e-159 567.8 988 38.1
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 3.4e-159 566.6 868 40.6
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 1.3e-158 564.7 863 41.0
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 1.7e-158 564.3 978 38.8
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 6.4e-158 562.4 970 38.7
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 5.4e-157 559.3 955 38.1
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 1.0e-155 555.1 984 37.1
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 1.1e-154 551.6 986 37.4
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 1.9e-154 550.8 942 38.9
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 3.6e-153 546.6 656 45.9
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 1.7e-150 537.7 866 37.9
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 2.9e-150 537.0 980 36.3
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 3.7e-150 536.6 975 35.8
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 5.4e-149 532.7 1028 36.2
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 1.0e-147 528.5 856 38.9
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 1.9e-146 524.2 1025 35.4
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 2.1e-145 520.8 946 36.8
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 4.7e-145 519.6 672 45.4
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 1.4e-144 518.1 851 38.4
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 2.3e-144 517.3 1028 35.3
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 8.9e-144 515.4 890 36.9
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 3.4e-143 513.5 1047 34.2
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 7.6e-143 512.3 964 35.6
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 1.3e-142 511.5 982 36.3
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 3.2e-141 506.9 932 37.1
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 1.6e-140 504.6 964 35.8
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 2.1e-140 504.2 983 35.3
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 2.7e-140 503.8 983 36.1
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 7.8e-140 502.3 980 35.5
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 7.8e-140 502.3 952 35.8
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 1.6e-137 494.6 624 45.8
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 3.6e-137 493.4 665 43.9
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 6.8e-136 489.2 962 34.9
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 8.9e-136 488.8 797 39.9
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 7.6e-135 485.7 855 36.7
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 3.2e-133 480.3 1011 35.4
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 2.1e-132 477.6 855 35.3
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 2.7e-132 477.2 999 34.7
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 3.5e-132 476.9 974 34.4
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 3.5e-132 476.9 963 34.1
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 4.6e-132 476.5 951 35.1
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 2.3e-131 474.2 856 35.6
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 4.3e-130 469.9 943 34.5
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 2.4e-128 464.2 661 41.1
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 6.9e-128 462.6 1008 32.8
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 4.4e-127 459.9 555 47.6
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 2.8e-121 440.7 800 37.2
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 1.8e-120 438.0 836 36.5
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 3.4e-119 433.7 476 49.2
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 4.9e-118 429.9 935 32.7
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 8.4e-118 429.1 835 35.0
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 4.2e-117 426.8 889 34.5
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 4.5e-111 406.8 606 39.8
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 3.2e-109 400.6 836 34.3
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 6.0e-108 396.4 479 47.6
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 4.2e-101 373.6 813 31.9
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 1.2e-100 372.1 902 32.2
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 1.5e-98 365.2 724 35.6
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 5.7e-98 363.2 782 33.4
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 2.0e-95 354.8 664 36.1
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 1.7e-94 351.7 430 48.1
Rhsim04G0133900 Rhododendron simsii HOM05D006439 ORTHO05D008152 1.2e-92 345.5 343 52.2
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 1.1e-90 339.0 675 35.7
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 1.2e-87 328.9 815 33.9
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 5.1e-83 313.5 761 33.0
CSS0038647 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 2.9e-78 297.7 290 53.8
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 7.7e-63 246.5 868 27.9
SMO238G0046 Selaginella moellendorffii HOM05D006439 ORTHO05D008152 9.1e-56 223.0 904 27.8
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 2.5e-53 214.9 859 25.0
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 3.3e-53 214.5 459 35.1
Lj3A1001T30 Lonicera japonica HOM05D006439 ORTHO05D008152 1.4e-51 209.1 248 49.6
Ciclev10013912m.g Citrus clementina HOM05D006439 ORTHO05D008152 5.0e-46 190.7 173 56.6
PGSC0003DMG402008399 Solanum tuberosum HOM05D006439 ORTHO05D008152 3.3e-45 188.0 176 53.4
QL07p039868 Quercus lobata HOM05D006439 ORTHO05D008152 6.4e-41 173.7 196 50.5
SEGI_26522 Sequoiadendron giganteum HOM05D006439 ORTHO05D000001 3.5e-39 167.9 219 42.0
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 2.3e-38 165.2 502 28.5
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 2.7e-31 141.7 130 53.1
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 6.0e-31 140.6 301 33.2
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 1.6e-28 132.5 307 31.3
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.1e-27 129.8 129 49.6
CAN.G1099.8 Capsicum annuum HOM05D006439 ORTHO05D008152 2.0e-26 125.6 132 47.7
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 1.9e-24 119.0 417 26.6
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 6.0e-23 114.0 363 25.3
Lj3A1001T31 Lonicera japonica HOM05D006439 ORTHO05D008152 3.6e-20 104.8 97 52.6
AUR62028586 Chenopodium quinoa HOM05D006439 ORTHO05D008152 1.4e-19 102.8 95 51.6
SEGI_02684 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 2.6e-18 98.6 102 50.0
FAN09G3024 Fragaria x ananassa HOM05D006439 ORTHO05D008152 5.8e-18 97.4 158 36.1
Thecc.10G111400 Theobroma cacao HOM05D006439 ORTHO05D008152 5.4e-16 90.9 76 56.6
RcHm_v2.0_Chr3g0472501 Rosa chinensis HOM05D006439 ORTHO05D008152 1.6e-15 89.4 187 34.2
VMungo1383G1144 Vigna mungo HOM05D006439 ORTHO05D008152 1.6e-15 89.4 195 31.3
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 2.1e-15 89.0 494 23.5
CSS0030357 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 1.7e-14 85.9 129 40.3
Lj3A1001G26 Lonicera japonica HOM05D006439 ORTHO05D008152 3.9e-14 84.7 166 32.5
VMungo1127G2301 Vigna mungo HOM05D006439 ORTHO05D008152 5.1e-14 84.3 181 32.0
TAR623G0848 Trochodendron aralioides HOM05D006439 ORTHO05D008152 2.0e-10 72.4 64 51.6
AUR62033535 Chenopodium quinoa HOM05D006439 ORTHO05D008152 2.6e-10 72.0 68 51.5
Aqoxy2G01351 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 6.4e-09 67.4 205 28.8
CSS0006664 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 7.9e-07 60.5 90 38.9
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 1.7e-06 59.3 92 32.6


User provided reference genes

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