Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 2.7e-100 368.6 181 100.0
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 9.6e-98 360.1 177 99.4
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 1.0e-43 180.6 176 54.5
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 8.3e-41 171.0 178 50.6
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 1.6e-39 166.8 175 49.1
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 5.9e-39 164.9 177 48.6
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 1.3e-38 163.7 177 48.6
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 2.3e-38 162.9 177 48.0
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 5.0e-38 161.8 178 48.9
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 6.6e-38 161.4 174 48.9
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 1.1e-37 160.6 178 47.2
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 1.5e-37 160.2 174 49.4
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 2.5e-37 159.5 180 47.8
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 5.6e-37 158.3 178 49.4
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 7.3e-37 157.9 173 46.2
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 1.2e-36 157.1 176 48.3
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 2.1e-36 156.4 176 48.3
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.1e-36 156.4 173 48.6
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 2.8e-36 156.0 178 44.9
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 3.6e-36 155.6 177 45.8
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 3.6e-36 155.6 178 44.9
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 4.7e-36 155.2 175 45.7
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 8.0e-36 154.5 178 44.9
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 1.0e-35 154.1 178 47.2
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 1.0e-35 154.1 180 46.1
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.8e-35 153.3 178 44.4
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.3e-35 152.9 177 45.8
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 3.1e-35 152.5 181 46.4
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 3.1e-35 152.5 181 46.4
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 3.1e-35 152.5 178 48.3
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 4.0e-35 152.1 178 44.4
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.2e-35 151.8 174 46.0
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.2e-35 151.8 174 46.0
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 8.9e-35 151.0 178 47.8
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 1.2e-34 150.6 176 46.6
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 1.5e-34 150.2 173 45.7
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 1.5e-34 150.2 176 47.2
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 1.5e-34 150.2 179 44.1
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 2.0e-34 149.8 178 43.3
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 2.0e-34 149.8 178 46.1
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 2.0e-34 149.8 178 46.6
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 2.6e-34 149.4 176 43.8
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-34 149.4 174 45.4
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-34 149.4 174 45.4
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-34 149.4 174 45.4
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-34 149.4 174 45.4
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-34 149.4 174 45.4
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 4.4e-34 148.7 176 47.2
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.7e-33 146.7 178 47.2
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 2.2e-33 146.4 177 42.4
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 2.2e-33 146.4 178 44.9
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 2.9e-33 146.0 167 48.5
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 2.9e-33 146.0 176 47.2
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 2.9e-33 146.0 178 43.3
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 3.7e-33 145.6 176 45.5
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 3.7e-33 145.6 176 45.5
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 4.9e-33 145.2 178 43.8
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 8.3e-33 144.4 180 47.2
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.1e-32 144.1 176 45.5
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 1.4e-32 143.7 176 44.9
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 1.4e-32 143.7 178 46.6
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.9e-32 143.3 173 39.9
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.9e-32 143.3 178 44.4
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.4e-32 142.9 176 44.9
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.4e-32 142.9 176 44.9
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 2.4e-32 142.9 178 44.4
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 4.1e-32 142.1 176 44.9
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 5.4e-32 141.7 191 43.5
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 7.0e-32 141.4 177 44.6
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 9.2e-32 141.0 176 45.5
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.6e-31 140.2 174 46.6
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 1.6e-31 140.2 167 45.5
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 2.7e-31 139.4 175 45.7
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 2.7e-31 139.4 175 43.4
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 3.5e-31 139.0 177 41.8
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 6.0e-31 138.3 175 41.7
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 1.0e-30 137.5 176 43.8
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.0e-30 137.5 176 45.5
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 1.7e-30 136.7 177 39.0
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 2.3e-30 136.3 176 44.3
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 3.9e-30 135.6 174 41.4
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 3.9e-30 135.6 171 46.2
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 3.9e-30 135.6 179 38.5
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 5.0e-30 135.2 178 41.6
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 6.6e-30 134.8 176 42.0
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 8.6e-30 134.4 176 41.5
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 1.9e-29 133.3 176 42.6
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 4.3e-29 132.1 178 42.1
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 1.6e-28 130.2 174 42.5
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 2.1e-28 129.8 176 42.6
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 4.7e-28 128.6 177 39.5
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 6.2e-28 128.3 194 40.2
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 6.2e-28 128.3 179 41.9
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 6.2e-28 128.3 178 39.9
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.1e-27 127.5 179 43.0
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 1.2e-26 124.0 167 42.5
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 1.2e-26 124.0 178 42.7
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 4.4e-26 122.1 177 38.4
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 1.3e-25 120.6 155 46.5
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 1.6e-23 113.6 142 45.8
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 3.5e-23 112.5 150 43.3
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 9.5e-21 104.4 187 36.9
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 2.8e-20 102.8 139 38.1
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 4.7e-20 102.1 229 30.6
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 9.9e-18 94.4 132 42.4
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 6.4e-17 91.7 204 29.9


User provided reference genes

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