Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 9.8e-49 196.4 96 100.0
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 1.0e-21 106.7 77 67.5
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.0e-21 106.7 77 67.5
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.3e-21 106.3 77 67.5
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.3e-21 106.3 77 67.5
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 2.3e-21 105.5 77 66.2
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 3.0e-21 105.1 77 62.3
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 3.0e-21 105.1 77 66.2
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 5.1e-21 104.4 77 66.2
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 5.1e-21 104.4 77 67.5
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 8.6e-21 103.6 77 64.9
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 8.6e-21 103.6 77 62.3
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 8.6e-21 103.6 77 68.8
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 1.1e-20 103.2 77 64.9
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.5e-20 102.8 77 63.6
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.5e-20 102.8 77 64.9
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 1.9e-20 102.4 77 66.2
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.9e-20 102.4 77 63.6
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 1.9e-20 102.4 77 63.6
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 2.5e-20 102.1 77 64.9
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 3.3e-20 101.7 77 66.2
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 4.3e-20 101.3 77 62.3
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 5.6e-20 100.9 77 63.6
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 7.3e-20 100.5 77 59.7
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 1.2e-19 99.8 77 62.3
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 1.6e-19 99.4 81 63.0
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.6e-19 99.4 77 64.9
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 1.6e-19 99.4 86 53.5
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.6e-19 99.4 77 63.6
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 2.1e-19 99.0 77 62.3
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 2.1e-19 99.0 77 62.3
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 2.1e-19 99.0 77 62.3
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 2.8e-19 98.6 77 59.7
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 2.8e-19 98.6 77 63.6
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 3.6e-19 98.2 77 61.0
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 4.7e-19 97.8 77 63.6
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 4.7e-19 97.8 77 63.6
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 4.7e-19 97.8 78 60.3
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 4.7e-19 97.8 77 62.3
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 4.7e-19 97.8 77 62.3
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 6.2e-19 97.4 77 62.3
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 1.1e-18 96.7 77 62.3
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.1e-18 96.7 81 61.7
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 1.8e-18 95.9 76 60.5
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 1.8e-18 95.9 77 61.0
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.8e-18 95.9 77 61.0
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 2.3e-18 95.5 77 62.3
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 2.3e-18 95.5 78 61.5
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 2.3e-18 95.5 79 62.0
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 2.3e-18 95.5 77 61.0
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 2.3e-18 95.5 81 58.0
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 3.1e-18 95.1 77 57.1
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 4.0e-18 94.7 77 61.0
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 4.0e-18 94.7 77 61.0
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 4.0e-18 94.7 77 61.0
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 5.2e-18 94.4 77 62.3
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 5.2e-18 94.4 77 61.0
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 5.2e-18 94.4 77 61.0
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 5.2e-18 94.4 81 61.7
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 8.9e-18 93.6 77 63.6
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 8.9e-18 93.6 77 62.3
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.2e-17 93.2 78 60.3
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.2e-17 93.2 77 59.7
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.5e-17 92.8 77 61.0
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 2.0e-17 92.4 77 61.0
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 2.6e-17 92.0 79 58.2
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 3.4e-17 91.7 77 59.7
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 3.4e-17 91.7 77 57.1
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 3.4e-17 91.7 77 59.7
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 4.4e-17 91.3 77 59.7
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 5.8e-17 90.9 86 55.8
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 5.8e-17 90.9 77 61.0
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 7.6e-17 90.5 77 57.1
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 9.9e-17 90.1 77 61.0
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 1.3e-16 89.7 77 57.1
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 1.3e-16 89.7 77 59.7
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.3e-16 89.7 77 55.8
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 1.3e-16 89.7 77 55.8
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 1.3e-16 89.7 77 55.8
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 1.3e-16 89.7 77 57.1
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.7e-16 89.4 77 55.8
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.7e-16 89.4 84 53.6
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 2.9e-16 88.6 77 59.7
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 3.7e-16 88.2 77 61.0
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 3.7e-16 88.2 77 58.4
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 4.9e-16 87.8 77 55.8
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 6.4e-16 87.4 77 58.4
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 6.4e-16 87.4 96 52.1
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 1.1e-15 86.7 77 55.8
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.1e-15 86.7 77 57.1
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 1.1e-15 86.7 68 60.3
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 5.4e-15 84.3 78 55.1
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 1.3e-13 79.7 94 44.7
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 4.7e-11 71.2 77 48.1
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.4e-10 69.7 67 56.7
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 4.0e-10 68.2 73 50.7
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 2.0e-09 65.9 81 45.7
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 1.3e-08 63.2 60 50.0
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 3.2e-07 58.5 57 49.1
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 3.2e-07 58.5 57 49.1


User provided reference genes

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