Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 5.4e-116 421.0 212 100.0
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 8.3e-16 88.2 146 37.7
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.1e-12 77.8 89 40.4
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 2.5e-12 76.6 82 47.6
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 4.3e-12 75.9 65 52.3
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 5.6e-12 75.5 72 47.2
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 7.3e-12 75.1 137 29.9
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 7.3e-12 75.1 65 50.8
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 7.3e-12 75.1 66 51.5
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 9.5e-12 74.7 65 52.3
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 9.5e-12 74.7 65 52.3
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.2e-11 74.3 65 50.8
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 1.2e-11 74.3 65 50.8
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.6e-11 73.9 67 50.7
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 1.6e-11 73.9 76 46.1
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 6.1e-11 72.0 73 49.3
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 6.1e-11 72.0 122 35.2
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 1.0e-10 71.2 67 46.3
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 1.0e-10 71.2 67 46.3
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 1.0e-10 71.2 67 46.3
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.0e-10 71.2 67 46.3
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.0e-10 71.2 67 46.3
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.0e-10 71.2 72 45.8
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 1.0e-10 71.2 72 47.2
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 1.4e-10 70.9 65 46.2
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 1.4e-10 70.9 72 44.4
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 1.4e-10 70.9 83 38.6
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 1.8e-10 70.5 91 39.6
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 1.8e-10 70.5 72 48.6
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 1.8e-10 70.5 72 47.2
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 2.3e-10 70.1 76 42.1
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 3.0e-10 69.7 70 47.1
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 3.0e-10 69.7 70 47.1
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 3.0e-10 69.7 166 32.5
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 3.0e-10 69.7 65 47.7
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 4.0e-10 69.3 72 44.4
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 4.0e-10 69.3 72 45.8
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 4.0e-10 69.3 72 47.2
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 5.2e-10 68.9 67 44.8
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 5.2e-10 68.9 115 38.3
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 6.8e-10 68.6 65 46.2
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 6.8e-10 68.6 65 47.7
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 6.8e-10 68.6 65 47.7
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 6.8e-10 68.6 65 47.7
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 6.8e-10 68.6 72 47.2
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 6.8e-10 68.6 72 45.8
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 6.8e-10 68.6 115 37.4
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 6.8e-10 68.6 65 46.2
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 8.9e-10 68.2 67 43.3
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 8.9e-10 68.2 64 51.6
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 8.9e-10 68.2 65 47.7
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 8.9e-10 68.2 64 46.9
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 1.5e-09 67.4 65 47.7
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 1.5e-09 67.4 121 31.4
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.5e-09 67.4 64 46.9
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 1.5e-09 67.4 65 44.6
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 1.5e-09 67.4 65 44.6
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 2.0e-09 67.0 67 43.3
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 2.0e-09 67.0 72 43.1
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.4e-09 66.2 67 43.3
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 3.4e-09 66.2 72 45.8
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 3.4e-09 66.2 82 40.2
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 4.4e-09 65.9 72 45.8
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 4.4e-09 65.9 44 65.9
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 5.7e-09 65.5 67 49.3
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 7.5e-09 65.1 66 47.0
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 7.5e-09 65.1 72 44.4
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 9.8e-09 64.7 95 36.8
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 1.3e-08 64.3 82 40.2
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.3e-08 64.3 66 47.0
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.3e-08 64.3 72 44.4
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 1.7e-08 63.9 65 44.6
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.7e-08 63.9 138 31.9
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 1.7e-08 63.9 44 65.9
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 1.7e-08 63.9 65 46.2
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 1.7e-08 63.9 105 33.3
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 2.2e-08 63.5 67 47.8
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.2e-08 63.5 84 44.0
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 2.2e-08 63.5 72 43.1
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.9e-08 63.2 83 37.3
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 4.9e-08 62.4 76 39.5
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 6.4e-08 62.0 76 40.8
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 6.4e-08 62.0 76 40.8
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 6.4e-08 62.0 65 46.2
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 6.4e-08 62.0 65 46.2
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 6.4e-08 62.0 65 46.2
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 6.4e-08 62.0 65 46.2
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 6.4e-08 62.0 73 47.9
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.1e-07 61.2 75 42.7
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.1e-07 61.2 75 42.7
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 1.1e-07 61.2 44 61.4
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 1.4e-07 60.8 65 40.0
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 1.8e-07 60.5 44 59.1
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 5.4e-07 58.9 61 41.0
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 9.2e-07 58.2 65 44.6
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 9.2e-07 58.2 44 59.1
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.2e-06 57.8 44 56.8
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 2.0e-06 57.0 70 37.1
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 2.7e-06 56.6 44 56.8
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 4.6e-06 55.8 44 59.1
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 5.9e-06 55.5 64 40.6


User provided reference genes

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