Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005008 Vanilla planifolia HOM05D004110 ORTHO05D004810 0.0e+00 1749.2 888 100.0
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 9.8e-220 767.7 854 47.4
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 2.9e-219 766.1 863 46.3
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 3.0e-208 729.6 864 43.9
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 3.3e-207 726.1 864 43.8
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 2.6e-204 716.5 865 44.4
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 6.0e-201 705.3 847 44.6
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 1.0e-200 704.5 891 43.8
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 1.5e-199 700.7 849 43.5
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 5.6e-199 698.7 875 44.5
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 1.6e-198 697.2 851 44.2
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 5.2e-197 692.2 843 44.4
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 9.9e-196 688.0 837 44.4
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 2.2e-195 686.8 845 43.8
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 3.2e-194 682.9 846 44.1
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 7.1e-194 681.8 850 43.4
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 1.2e-193 681.0 878 42.1
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.3e-192 677.6 837 44.0
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 2.3e-192 676.8 845 43.4
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 6.6e-192 675.2 837 43.8
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.5e-191 673.3 839 44.0
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 3.3e-191 672.9 845 43.2
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 3.3e-191 672.9 852 44.2
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 4.3e-191 672.5 831 44.0
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 2.1e-190 670.2 849 43.6
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 2.1e-190 670.2 849 43.6
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 4.8e-190 669.1 839 43.7
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 5.3e-189 665.6 852 43.9
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 9.9e-188 661.4 849 42.0
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 1.7e-187 660.6 852 42.8
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 8.4e-187 658.3 850 42.4
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 1.4e-186 657.5 838 43.4
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 1.4e-186 657.5 844 42.1
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 2.4e-186 656.8 844 42.1
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 1.6e-185 654.1 845 42.2
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 6.0e-185 652.1 857 41.4
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 1.0e-184 651.4 837 43.1
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 3.0e-184 649.8 854 42.6
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 6.7e-184 648.7 879 41.4
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 8.7e-184 648.3 857 42.6
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 1.5e-183 647.5 900 41.4
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 2.5e-183 646.7 838 43.1
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 2.5e-183 646.7 852 41.8
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 5.6e-183 645.6 850 41.6
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 9.6e-183 644.8 844 41.8
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 4.8e-182 642.5 849 41.7
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 6.2e-182 642.1 854 41.8
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 6.2e-182 642.1 933 40.1
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 5.3e-181 639.0 854 41.3
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 5.3e-181 639.0 850 42.6
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 2.6e-180 636.7 850 41.4
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 2.6e-180 636.7 865 41.6
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 2.9e-179 633.3 853 40.8
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 3.8e-179 632.9 854 41.2
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 1.1e-178 631.3 860 41.7
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 5.5e-178 629.0 863 41.5
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 1.2e-177 627.9 860 41.5
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 2.7e-177 626.7 863 41.4
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 6.7e-176 622.1 916 39.2
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 6.7e-176 622.1 916 39.2
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 6.7e-176 622.1 852 41.0
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 4.3e-175 619.4 843 41.0
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 3.7e-174 616.3 934 39.7
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 1.9e-170 604.0 853 40.6
vmacro17378 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 4.2e-170 602.8 593 50.8
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 6.0e-169 599.0 815 41.7
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 6.7e-168 595.5 836 39.7
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 2.8e-166 590.1 845 40.6
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 5.5e-162 575.9 951 37.4
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 7.2e-162 575.5 857 39.2
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 2.7e-161 573.5 863 38.5
Haze_02194 Corylus avellana HOM05D004110 ORTHO05D004810 4.6e-161 572.8 659 46.0
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 1.0e-160 571.6 942 36.7
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 2.5e-159 567.0 872 38.0
Nitab4.5_0006590g0020 Nicotiana tabacum HOM05D004110 ORTHO05D004810 1.0e-155 555.1 773 41.7
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 1.0e-155 555.1 847 36.5
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 5.3e-149 532.7 789 40.4
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 2.5e-146 523.9 658 43.0
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 1.3e-139 501.5 704 41.5
Cpa.g.sc37.188 Carica papaya HOM05D004110 ORTHO05D004810 3.0e-136 490.3 477 50.9
CDE05G0764 Ceratophyllum demersum HOM05D004110 ORTHO05D004810 2.6e-135 487.3 708 38.3
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 4.2e-130 469.9 756 35.8
MD10G1119400 Malus domestica HOM05D004110 ORTHO05D004810 1.2e-127 461.8 652 42.2
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 1.7e-126 458.0 908 31.1
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 1.7e-126 458.0 861 33.7
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 1.1e-125 455.3 880 31.9
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 1.1e-122 445.3 559 43.6
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 2.3e-115 421.0 609 39.2
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 6.4e-110 402.9 921 31.1
CAN.G603.2 Capsicum annuum HOM05D004110 ORTHO05D004810 3.0e-99 367.5 610 37.5
Glyma.11G098551 Glycine max HOM05D004110 ORTHO05D004810 3.2e-93 347.4 327 51.1
SHI05691 Sapria himalayana HOM05D004110 ORTHO05D004810 2.1e-92 344.7 500 39.4
ClCG02G011580 Citrullus lanatus HOM05D004110 ORTHO05D004810 1.1e-56 226.1 235 48.5
CSS0003289 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 2.2e-54 218.4 195 54.9
HPP92_005013 Vanilla planifolia HOM05D004110 ORTHO05D004810 9.4e-45 186.4 101 95.0
CBR_g5647 Chara braunii HOM05D004110 ORTHO05D004810 5.1e-43 180.6 509 26.9
Duzib248G1214 Durio zibethinus HOM05D004110 ORTHO05D004810 4.5e-39 167.5 180 48.9
Cpa.g.sc37.187 Carica papaya HOM05D004110 ORTHO05D004810 1.0e-38 166.4 371 32.6
Solyc11g039890.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 1.1e-32 146.4 161 43.5
MD10G1119100 Malus domestica HOM05D004110 ORTHO05D004810 8.8e-27 126.7 128 51.6
CSS0008861 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 7.4e-26 123.6 130 51.5
CSS0015162 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 1.1e-24 119.8 99 55.6
Duzib248G0147 Durio zibethinus HOM05D004110 ORTHO05D004810 9.1e-24 116.7 268 30.2
MCO14G095 Micromonas commoda HOM05D004110 ORTHO05D004810 9.1e-24 116.7 563 25.2
vmacro17377 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 2.2e-22 112.1 252 32.1
ClCG02G011590 Citrullus lanatus HOM05D004110 ORTHO05D004810 1.2e-20 106.3 93 53.8
Zm00001eb026660 Zea mays HOM05D004110 ORTHO05D004810 3.6e-20 104.8 143 40.6
Hma1.2p1_0032F.1_g019640 Hydrangea macrophylla HOM05D004110 ORTHO05D004810 1.0e-19 103.2 95 49.5
COL.COLO4_17260 Corchorus olitorius HOM05D004110 ORTHO05D004810 4.0e-19 101.3 110 44.5
Os10g0154566 Oryza sativa ssp. japonica HOM05D004110 ORTHO05D004810 1.2e-18 99.8 124 39.5
ClCG02G011550 Citrullus lanatus HOM05D004110 ORTHO05D004810 5.7e-18 97.4 144 41.0
AagrBONN_evm.TU.Sc2ySwM_344.4149 Anthoceros agrestis HOM05D004110 ORTHO05D004810 1.8e-16 92.4 158 34.2
Gohir.A12G039250 Gossypium hirsutum HOM05D004110 ORTHO05D004810 1.8e-16 92.4 107 41.1
arahy.Tifrunner.gnm1.ann1.G8A5JV Arachis hypogaea HOM05D004110 ORTHO05D004810 1.6e-15 89.4 88 42.0
Zm00001eb026650 Zea mays HOM05D004110 ORTHO05D004810 6.5e-14 84.0 189 29.1
Haze_02193 Corylus avellana HOM05D004110 ORTHO05D004810 4.2e-13 81.3 250 30.4
CSS0024884 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 1.0e-11 76.6 84 45.2
BolC8t52466H Brassica oleracea HOM05D004110 ORTHO05D004810 1.2e-10 73.2 51 62.7
HanXRQChr09g0252681 Helianthus annuus HOM05D004110 ORTHO05D004810 2.2e-09 68.9 52 51.9
CBR_g66117 Chara braunii HOM05D000019 ORTHO05D001702 6.3e-09 67.4 105 34.3
SHI05692 Sapria himalayana HOM05D004110 ORTHO05D004810 2.4e-08 65.5 69 44.9
CAN.G603.1 Capsicum annuum HOM05D004110 ORTHO05D004810 2.7e-07 62.0 84 39.3
SHI05698 Sapria himalayana HOM05D004110 ORTHO05D004810 2.3e-06 58.9 98 32.7


User provided reference genes

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