Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003526 Vanilla planifolia HOM05D004403 ORTHO05D006164 0.0e+00 1123.2 561 100.0
TAR375G1017 Trochodendron aralioides HOM05D004403 ORTHO05D006164 1.8e-126 457.2 543 49.9
MBI04_g32240_MAGBIO Magnolia biondii HOM05D004403 ORTHO05D006164 3.4e-125 453.0 540 49.3
Prupe.2G282700 Prunus persica HOM05D004403 ORTHO05D006164 2.4e-123 446.8 539 49.2
RcHm_v2.0_Chr1g0375181 Rosa chinensis HOM05D004403 ORTHO05D006164 1.2e-122 444.5 541 48.6
Nn1g01207 Nelumbo nucifera HOM05D004403 ORTHO05D006164 3.5e-122 443.0 501 52.7
Aqoxy7G00599 Aquilegia oxysepala HOM05D004403 ORTHO05D006164 1.7e-121 440.7 559 48.3
Actinidia25041 Actinidia chinensis HOM05D004403 ORTHO05D006164 3.9e-121 439.5 543 48.6
Sc17g0003760 Simmondsia chinensis HOM05D004403 ORTHO05D006164 4.3e-120 436.0 558 46.2
EL10Ac3g05779 Beta vulgaris HOM05D004403 ORTHO05D006164 7.3e-120 435.3 529 48.6
ATR0810G058 Amborella trichopoda HOM05D004403 ORTHO05D006164 9.5e-120 434.9 541 47.9
FAN10G1553 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.2e-119 434.5 533 49.2
Lj2g0001335 Lotus japonicus HOM05D004403 ORTHO05D006164 3.6e-119 433.0 536 47.4
PSO782G0596 Papaver somniferum HOM05D004403 ORTHO05D006164 3.6e-119 433.0 541 48.2
Gorai.006G065300 Gossypium raimondii HOM05D004403 ORTHO05D006164 6.2e-119 432.2 530 49.1
Gohir.D09G045100 Gossypium hirsutum HOM05D004403 ORTHO05D006164 1.4e-118 431.0 530 49.1
FAN01G1597 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.8e-118 430.6 534 48.5
FAN03G0558 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.8e-118 430.6 533 48.8
TPR.G10680 Trifolium pratense HOM05D004403 ORTHO05D006164 2.3e-118 430.3 529 47.6
FAN06G1852 Fragaria x ananassa HOM05D004403 ORTHO05D006164 3.1e-118 429.9 525 49.0
Manes.06G138300 Manihot esculenta HOM05D004403 ORTHO05D006164 3.1e-118 429.9 530 47.7
Hund11791 Selenicereus undatus HOM05D004403 ORTHO05D006164 3.1e-118 429.9 561 45.3
FAN03G1790 Fragaria x ananassa HOM05D004403 ORTHO05D006164 4.0e-118 429.5 536 48.9
FvH4_7g28210 Fragaria vesca HOM05D004403 ORTHO05D006164 5.2e-118 429.1 525 49.0
CiPaw.04G063300 Carya illinoinensis HOM05D004403 ORTHO05D006164 8.9e-118 428.3 531 49.3
Ciclev10004147m.g Citrus clementina HOM05D004403 ORTHO05D006164 8.9e-118 428.3 538 47.4
Sp6g13860 Schrenkiella parvula HOM05D004403 ORTHO05D006164 1.5e-117 427.6 523 48.6
Potri.012G022700 Populus trichocarpa HOM05D004403 ORTHO05D006164 2.0e-117 427.2 531 47.8
Solyc03g007100.3 Solanum lycopersicum HOM05D004403 ORTHO05D006164 2.6e-117 426.8 511 50.1
VMungo0464G1100 Vigna mungo HOM05D004403 ORTHO05D006164 3.4e-117 426.4 489 50.3
Gohir.A09G043600 Gossypium hirsutum HOM05D004403 ORTHO05D006164 4.4e-117 426.0 530 48.9
Duzib205G1350 Durio zibethinus HOM05D004403 ORTHO05D006164 5.8e-117 425.6 539 48.6
MD01G1186100 Malus domestica HOM05D004403 ORTHO05D006164 5.8e-117 425.6 540 47.2
PSO478G4614 Papaver somniferum HOM05D004403 ORTHO05D006164 5.8e-117 425.6 541 47.9
Sopen03g003090 Solanum pennellii HOM05D004403 ORTHO05D006164 7.6e-117 425.2 534 47.9
AT5G51660 Arabidopsis thaliana HOM05D004403 ORTHO05D006164 1.3e-116 424.5 523 48.0
A02p12180 Brassica napus HOM05D004403 ORTHO05D006164 1.3e-116 424.5 523 48.6
BraA02t06282Z Brassica rapa HOM05D004403 ORTHO05D006164 1.3e-116 424.5 523 48.6
Ah.07g208350 Amaranthus hybridus HOM05D004403 ORTHO05D006164 1.7e-116 424.1 551 45.2
Cfa008231 Carpinus fangiana HOM05D004403 ORTHO05D006164 2.2e-116 423.7 560 46.8
Medtr6g461810 Medicago truncatula HOM05D004403 ORTHO05D006164 2.2e-116 423.7 530 46.2
Thecc.03G162000 Theobroma cacao HOM05D004403 ORTHO05D006164 4.9e-116 422.5 540 47.6
GSVIVG01018506001 Vitis vinifera HOM05D004403 ORTHO05D006164 4.9e-116 422.5 540 47.8
Thhalv10012441m.g Eutrema salsugineum HOM05D004403 ORTHO05D006164 6.4e-116 422.2 523 47.8
Aa31LG3G8090 Aethionema arabicum HOM05D004403 ORTHO05D006164 1.1e-115 421.4 521 48.4
Peaxi162Scf00192g01018 Petunia axillaris HOM05D004403 ORTHO05D006164 1.1e-115 421.4 496 50.4
AL8G25910 Arabidopsis lyrata HOM05D004403 ORTHO05D006164 1.4e-115 421.0 523 47.8
Ca_26390_v3 Cicer arietinum L. HOM05D004403 ORTHO05D006164 1.4e-115 421.0 530 47.9
Sabra12G0011100 Salix brachista HOM05D004403 ORTHO05D006164 1.4e-115 421.0 531 47.6
TWI39G0431 Tripterygium wilfordii HOM05D004403 ORTHO05D006164 1.9e-115 420.6 538 46.7
Carub.0008s1166 Capsella rubella HOM05D004403 ORTHO05D006164 3.2e-115 419.9 523 47.4
FAN06G4744 Fragaria x ananassa HOM05D004403 ORTHO05D006164 5.4e-115 419.1 526 48.3
QL12p039581 Quercus lobata HOM05D004403 ORTHO05D006164 7.1e-115 418.7 534 48.3
Lalb_Chr03g0033081 Lupinus albus HOM05D004403 ORTHO05D006164 9.2e-115 418.3 529 47.1
BcaB05g23994 Brassica carinata HOM05D004403 ORTHO05D006164 1.2e-114 417.9 523 48.0
Hma1.2p1_0099F.1_g048870 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 1.2e-114 417.9 531 47.5
arahy.Tifrunner.gnm1.ann1.ZK7SIQ Arachis hypogaea HOM05D004403 ORTHO05D006164 1.6e-114 417.5 530 46.8
BcaC03g14584 Brassica carinata HOM05D004403 ORTHO05D006164 2.7e-114 416.8 523 48.0
BolC2t08162H Brassica oleracea HOM05D004403 ORTHO05D006164 2.7e-114 416.8 523 48.0
C02p20300 Brassica napus HOM05D004403 ORTHO05D006164 3.5e-114 416.4 523 47.8
Oeu021730.2 Olea europaea HOM05D004403 ORTHO05D006164 1.7e-113 414.1 532 47.6
Phvul.004G126600 Phaseolus vulgaris HOM05D004403 ORTHO05D006164 1.7e-113 414.1 528 46.4
THA.LOC104825074 Tarenaya hassleriana HOM05D004403 ORTHO05D006164 1.7e-113 414.1 523 48.0
CAN.G916.4 Capsicum annuum HOM05D004403 ORTHO05D006164 5.1e-113 412.5 539 46.4
Glyma.16G203900 Glycine max HOM05D004403 ORTHO05D006164 5.1e-113 412.5 528 46.0
Eucgr.K00143 Eucalyptus grandis HOM05D004403 ORTHO05D006164 6.6e-113 412.1 537 47.1
Glyma.09G153100 Glycine max HOM05D004403 ORTHO05D006164 6.6e-113 412.1 528 46.8
arahy.Tifrunner.gnm1.ann1.R8RU34 Arachis hypogaea HOM05D004403 ORTHO05D006164 1.9e-112 410.6 540 46.1
Cc02_g03860 Coffea canephora HOM05D004403 ORTHO05D006164 8.1e-111 405.2 539 44.5
Lj8C36G18 Lonicera japonica HOM05D004403 ORTHO05D006164 8.1e-111 405.2 545 45.7
DCAR_016012 Daucus carota HOM05D004403 ORTHO05D006164 1.1e-110 404.8 551 45.2
DCAR_005517 Daucus carota HOM05D004403 ORTHO05D006164 1.4e-110 404.4 552 44.7
PGR142G2186 Punica granatum HOM05D004403 ORTHO05D006164 1.8e-110 404.1 530 45.7
Migut.F01168 Erythranthe guttata HOM05D004403 ORTHO05D006164 3.1e-110 403.3 560 46.1
SalBow2G1183 Salvia bowleyana HOM05D004403 ORTHO05D006164 4.0e-110 402.9 535 46.5
AUR62035037 Chenopodium quinoa HOM05D004403 ORTHO05D006164 5.2e-110 402.5 563 44.0
COL.COLO4_14184 Corchorus olitorius HOM05D004403 ORTHO05D006164 6.9e-110 402.1 585 43.4
Sed0016961 Sechium edule HOM05D004403 ORTHO05D006164 5.8e-109 399.1 526 45.2
SGA_v2.0_scaffold303G47887 Striga asiatica HOM05D004403 ORTHO05D006164 3.8e-108 396.4 577 43.2
MELO3C008722.2 Cucumis melo HOM05D004403 ORTHO05D006164 7.1e-107 392.1 530 44.5
ECA233G5768 Erigeron canadensis HOM05D004403 ORTHO05D006164 9.3e-107 391.7 538 45.0
CsaV3_2G009710 Cucumis sativus L. HOM05D004403 ORTHO05D006164 2.1e-106 390.6 530 44.5
Lsat_1_v5_gn_8_8061 Lactuca sativa HOM05D004403 ORTHO05D006164 4.6e-106 389.4 532 44.7
Zm00001eb086790 Zea mays HOM05D004403 ORTHO05D006164 6.0e-106 389.0 534 44.2
ClCG09G013380 Citrullus lanatus HOM05D004403 ORTHO05D006164 1.3e-105 387.9 525 44.8
Haze_13825 Corylus avellana HOM05D004403 ORTHO05D006164 3.0e-105 386.7 667 40.6
HanXRQChr08g0214911 Helianthus annuus HOM05D004403 ORTHO05D006164 2.8e-103 380.2 542 43.7
Nitab4.5_0009404g0010 Nicotiana tabacum HOM05D004403 ORTHO05D006164 1.4e-102 377.9 493 48.1
CSS0005074 Camellia sinensis var. sinensis HOM05D004403 ORTHO05D006164 1.5e-101 374.4 534 44.8
Cpa.g.sc3.264 Carica papaya HOM05D004403 ORTHO05D006164 1.7e-100 370.9 392 53.1
Atru.chr1.628 Acer truncatum HOM05D004403 ORTHO05D006164 4.9e-100 369.4 399 52.1
Rhsim03G0172000 Rhododendron simsii HOM05D004403 ORTHO05D006164 1.9e-99 367.5 704 36.9
Nitab4.5_0000072g0400 Nicotiana tabacum HOM05D004403 ORTHO05D006164 8.7e-97 358.6 487 45.8
vmacro06764 Vaccinium macrocarpon HOM05D004403 ORTHO05D006164 1.1e-96 358.2 730 36.2
unitig_0.g469 Utricularia gibba HOM05D004403 ORTHO05D006164 2.5e-96 357.1 551 42.5
AUR62016090 Chenopodium quinoa HOM05D004403 ORTHO05D006164 5.1e-89 332.8 528 40.5
CARHR264420 Cardamine hirsuta HOM05D004403 ORTHO05D006164 5.1e-81 306.2 446 44.4
Mapoly0021s0083 Marchantia polymorpha HOM05D004403 ORTHO05D006164 2.6e-77 293.9 522 37.9
Pp3c11_8810 Physcomitrium patens HOM05D004403 ORTHO05D006164 7.2e-75 285.8 532 37.4
AagrBONN_evm.TU.Sc2ySwM_228.3689 Anthoceros agrestis HOM05D004403 ORTHO05D006164 4.1e-70 270.0 530 37.4
Dinv22934 Davidia involucrata HOM05D004403 ORTHO05D006164 3.7e-63 246.9 189 63.5
SMO356G0002 Selaginella moellendorffii HOM05D004403 ORTHO05D006164 1.9e-59 234.6 531 32.2
CDE12G0406 Ceratophyllum demersum HOM05D004403 ORTHO05D006164 6.7e-57 226.1 183 60.7
Psat1g115120 Pisum sativum HOM05D004403 ORTHO05D006164 7.4e-56 222.6 266 49.6
Psat1g115160 Pisum sativum HOM05D004403 ORTHO05D006164 2.2e-55 221.1 175 59.4
CDE12G0311 Ceratophyllum demersum HOM05D004403 ORTHO05D006164 4.5e-53 213.4 224 54.0
CBR_g28568 Chara braunii HOM05D004403 ORTHO05D006164 3.8e-52 210.3 665 29.5
Thecc.05G209000 Theobroma cacao HOM05D004403 ORTHO05D006164 7.7e-45 186.0 166 57.2
Thecc.05G208700 Theobroma cacao HOM05D004403 ORTHO05D037589 7.0e-38 162.9 175 52.0
CARHR264330 Cardamine hirsuta HOM05D004403 ORTHO05D006164 7.3e-27 126.3 120 55.8
RcHm_v2.0_Chr7g0227531 Rosa chinensis HOM05D004403 ORTHO05D031317 1.4e-22 112.1 71 73.2
Cpa.g.sc3.267 Carica papaya HOM05D004403 ORTHO05D006164 1.2e-16 92.4 62 74.2
SEGI_37725 Sequoiadendron giganteum HOM05D004403 ORTHO05D037533 1.5e-16 92.0 66 69.7
SEGI_39896 Sequoiadendron giganteum HOM05D004403 ORTHO05D019398 8.3e-15 86.3 45 84.4
AL8G19390 Arabidopsis lyrata HOM05D018953 ORTHO05D031317 2.4e-14 84.7 49 81.6
PRCOL_00006166 Prasinoderma coloniale HOM05D004403 ORTHO05D006164 5.4e-14 83.6 526 24.3
MCO07G456 Micromonas commoda HOM05D004403 ORTHO05D006164 3.0e-12 77.8 350 24.0
RhsimUnG0154200 Rhododendron simsii HOM05D000504 ORTHO05D000403 3.9e-12 77.4 97 43.3
Lsat_1_v5_gn_4_141020 Lactuca sativa HOM05D004403 ORTHO05D048380 4.9e-07 60.5 58 46.6
Atru.chr1.4080 Acer truncatum HOM05D004403 ORTHO05D019398 1.4e-06 58.9 51 60.8
arahy.Tifrunner.gnm1.ann1.M75YZP Arachis hypogaea HOM05D002409 ORTHO05D002557 1.4e-06 58.9 65 50.8


User provided reference genes

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