Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 4.2e-144 514.6 246 100.0
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 1.3e-57 227.3 171 61.4
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 6.6e-57 224.9 142 72.5
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 9.5e-56 221.1 145 67.6
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 9.5e-56 221.1 199 57.3
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 1.6e-55 220.3 141 70.2
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 1.6e-55 220.3 145 68.3
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 2.8e-55 219.5 176 59.1
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 3.6e-55 219.2 137 72.3
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 3.6e-55 219.2 145 66.9
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 3.6e-55 219.2 163 62.0
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 6.2e-55 218.4 176 58.5
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 6.2e-55 218.4 137 70.8
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 1.0e-54 217.6 191 59.2
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 1.8e-54 216.9 148 69.6
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 3.1e-54 216.1 159 64.2
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 8.9e-54 214.5 152 65.8
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 1.5e-53 213.8 141 67.4
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 2.0e-53 213.4 144 65.3
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 2.6e-53 213.0 145 65.5
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 2.6e-53 213.0 183 55.2
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 3.4e-53 212.6 147 63.9
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 3.4e-53 212.6 148 66.9
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 3.4e-53 212.6 153 64.1
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 4.4e-53 212.2 145 64.8
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 5.8e-53 211.8 147 66.7
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 5.8e-53 211.8 137 69.3
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 5.8e-53 211.8 161 62.1
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 7.5e-53 211.5 158 63.3
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 7.5e-53 211.5 145 64.8
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 7.5e-53 211.5 145 66.2
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 9.8e-53 211.1 137 68.6
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 1.3e-52 210.7 161 61.5
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 1.3e-52 210.7 145 63.4
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 1.3e-52 210.7 209 49.8
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 1.7e-52 210.3 137 70.1
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 1.7e-52 210.3 137 68.6
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 1.7e-52 210.3 145 65.5
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 2.2e-52 209.9 164 61.6
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 2.9e-52 209.5 140 65.0
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 2.9e-52 209.5 191 52.4
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 2.9e-52 209.5 185 54.6
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 3.7e-52 209.1 140 65.0
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 3.7e-52 209.1 140 65.0
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 3.7e-52 209.1 140 65.0
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 4.9e-52 208.8 146 63.7
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 4.9e-52 208.8 146 63.7
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 4.9e-52 208.8 144 65.3
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 4.9e-52 208.8 164 59.8
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 4.9e-52 208.8 137 69.3
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 4.9e-52 208.8 141 68.1
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 8.3e-52 208.0 137 68.6
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 1.4e-51 207.2 147 62.6
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 1.4e-51 207.2 190 53.2
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 1.4e-51 207.2 137 67.9
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 1.9e-51 206.8 137 65.0
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 2.4e-51 206.5 140 63.6
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 2.4e-51 206.5 147 61.9
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 2.4e-51 206.5 137 65.7
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 3.2e-51 206.1 147 61.9
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 3.2e-51 206.1 187 55.1
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 5.4e-51 205.3 161 61.5
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 5.4e-51 205.3 145 63.4
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 7.0e-51 204.9 144 64.6
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 7.0e-51 204.9 145 62.8
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 9.2e-51 204.5 163 59.5
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 9.2e-51 204.5 145 64.1
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 1.2e-50 204.1 141 66.7
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.2e-50 204.1 148 62.8
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.6e-50 203.8 152 62.5
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 2.0e-50 203.4 147 61.2
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 2.0e-50 203.4 161 57.8
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 2.7e-50 203.0 168 58.9
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 2.7e-50 203.0 215 51.2
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 3.5e-50 202.6 135 67.4
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 4.6e-50 202.2 152 61.2
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 6.0e-50 201.8 145 63.4
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.0e-49 201.1 145 62.8
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 1.0e-49 201.1 168 57.7
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 1.0e-49 201.1 168 57.7
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 1.3e-49 200.7 173 57.2
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 1.7e-49 200.3 172 57.6
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 1.7e-49 200.3 168 57.7
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 6.6e-49 198.4 172 55.8
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 1.1e-48 197.6 147 63.3
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 1.5e-48 197.2 153 62.1
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 2.1e-47 193.4 159 54.7
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 1.5e-45 187.2 155 52.9
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 8.3e-44 181.4 148 56.1
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 4.1e-43 179.1 147 59.9
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 1.6e-42 177.2 164 54.9
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 4.6e-42 175.6 122 65.6
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 1.1e-40 171.0 134 55.2
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 4.3e-40 169.1 196 42.9
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 5.8e-37 158.7 137 50.4
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 3.2e-35 152.9 135 50.4
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 5.4e-35 152.1 145 48.3
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 7.3e-32 141.7 138 51.4
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 2.1e-31 140.2 155 41.9
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 1.1e-27 127.9 137 42.3
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 3.2e-27 126.3 78 70.5
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 5.8e-21 105.5 195 34.4
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 4.2e-19 99.4 52 80.8
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.1e-15 87.0 56 69.6
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 6.2e-15 85.5 71 56.3
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 5.8e-13 79.0 104 39.4
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 4.6e-10 69.3 44 68.2
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 1.3e-09 67.8 65 52.3


User provided reference genes

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