Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003063 Vanilla planifolia HOM05D002552 ORTHO05D002700 1.3e-24 115.5 56 100.0
HPP92_011648 Vanilla planifolia HOM05D002552 ORTHO05D002700 4.6e-14 80.5 49 81.6
MBI15_g23246_MAGBIO Magnolia biondii HOM05D002552 ORTHO05D002700 2.5e-12 74.7 49 75.5
AUR62008299 Chenopodium quinoa HOM05D002552 ORTHO05D002700 3.6e-11 70.9 41 80.5
Hund02704 Selenicereus undatus HOM05D002552 ORTHO05D002700 4.7e-11 70.5 44 77.3
Potri.015G069400 Populus trichocarpa HOM05D002552 ORTHO05D002700 6.2e-11 70.1 38 86.8
AUR62031061 Chenopodium quinoa HOM05D002552 ORTHO05D002700 1.4e-10 68.9 46 71.7
Eucgr.B00376 Eucalyptus grandis HOM05D002552 ORTHO05D002700 1.8e-10 68.6 45 77.8
PSO591G0332 Papaver somniferum HOM05D002552 ORTHO05D002700 1.8e-10 68.6 51 66.7
Potri.012G074500 Populus trichocarpa HOM05D002552 ORTHO05D002700 1.8e-10 68.6 38 81.6
Sabra15G0093700 Salix brachista HOM05D002552 ORTHO05D002700 1.8e-10 68.6 38 84.2
PSO161G0102 Papaver somniferum HOM05D002552 ORTHO05D002700 2.3e-10 68.2 41 75.6
PSO478G3511 Papaver somniferum HOM05D002552 ORTHO05D002700 2.3e-10 68.2 41 75.6
PSO478G5096 Papaver somniferum HOM05D002552 ORTHO05D002700 3.1e-10 67.8 49 69.4
PSO832G1005 Papaver somniferum HOM05D002552 ORTHO05D002700 3.1e-10 67.8 49 69.4
Nitab4.5_0002101g0070 Nicotiana tabacum HOM05D002552 ORTHO05D002700 4.0e-10 67.4 52 69.2
Sabra12G0053000 Salix brachista HOM05D002552 ORTHO05D002700 5.2e-10 67.0 38 78.9
TAR622G0500 Trochodendron aralioides HOM05D002552 ORTHO05D002700 5.2e-10 67.0 49 69.4
EL10Ac5g10856 Beta vulgaris HOM05D002552 ORTHO05D002700 6.8e-10 66.6 45 68.9
CSS0007260 Camellia sinensis var. sinensis HOM05D002552 ORTHO05D002700 8.9e-10 66.2 41 75.6
Manes.14G071600 Manihot esculenta HOM05D002552 ORTHO05D002700 8.9e-10 66.2 38 81.6
Nitab4.5_0000003g0290 Nicotiana tabacum HOM05D002552 ORTHO05D002700 1.2e-09 65.9 52 67.3
Peaxi162Scf00017g02226 Petunia axillaris HOM05D002552 ORTHO05D002700 1.2e-09 65.9 52 67.3
PGSC0003DMG400033057 Solanum tuberosum HOM05D002552 ORTHO05D002700 1.2e-09 65.9 44 75.0
Lj9A455T56 Lonicera japonica HOM05D002552 ORTHO05D002700 1.5e-09 65.5 52 65.4
DCAR_016521 Daucus carota HOM05D002552 ORTHO05D002700 2.6e-09 64.7 53 60.4
MBI14_g06364_MAGBIO Magnolia biondii HOM05D002552 ORTHO05D002700 2.6e-09 64.7 53 64.2
CAN.G628.64 Capsicum annuum HOM05D002552 ORTHO05D002700 3.4e-09 64.3 44 75.0
Nitab4.5_0000026g0330 Nicotiana tabacum HOM05D002552 ORTHO05D002700 3.4e-09 64.3 44 75.0
Nitab4.5_0004139g0010 Nicotiana tabacum HOM05D002552 ORTHO05D002700 3.4e-09 64.3 44 75.0
Nitab4.5_0003694g0030 Nicotiana tabacum HOM05D002552 ORTHO05D002700 4.4e-09 63.9 52 63.5
Sc04g0002200 Simmondsia chinensis HOM05D002552 ORTHO05D002700 4.4e-09 63.9 38 71.1
Rhsim12G0160900 Rhododendron simsii HOM05D002552 ORTHO05D002700 5.8e-09 63.5 47 70.2
vmacro16581 Vaccinium macrocarpon HOM05D002552 ORTHO05D002700 5.8e-09 63.5 47 68.1
Rhsim08G0166900 Rhododendron simsii HOM05D002552 ORTHO05D002700 7.5e-09 63.2 41 70.7
Cc04_g16210 Coffea canephora HOM05D002552 ORTHO05D002700 9.8e-09 62.8 57 63.2
Manes.06G099500 Manihot esculenta HOM05D002552 ORTHO05D002700 9.8e-09 62.8 39 74.4
Sc12g0005590 Simmondsia chinensis HOM05D002552 ORTHO05D002700 1.3e-08 62.4 38 76.3
Atru.chr6.2167 Acer truncatum HOM05D002552 ORTHO05D002700 1.7e-08 62.0 42 66.7
Actinidia19071 Actinidia chinensis HOM05D002552 ORTHO05D002700 1.7e-08 62.0 44 70.5
Actinidia37690 Actinidia chinensis HOM05D002552 ORTHO05D002700 1.7e-08 62.0 44 70.5
Aqoxy3G03149 Aquilegia oxysepala HOM05D002552 ORTHO05D002700 1.7e-08 62.0 49 67.3
Ciclev10020913m.g Citrus clementina HOM05D002552 ORTHO05D002700 1.7e-08 62.0 54 59.3
Peaxi162Scf00689g00417 Petunia axillaris HOM05D002552 ORTHO05D002700 1.7e-08 62.0 36 75.0
Actinidia34966 Actinidia chinensis HOM05D002552 ORTHO05D002700 2.2e-08 61.6 44 70.5
Lsat_1_v5_gn_4_74020 Lactuca sativa HOM05D002552 ORTHO05D002700 2.9e-08 61.2 52 65.4
Nn4g22949 Nelumbo nucifera HOM05D002552 ORTHO05D002700 2.9e-08 61.2 41 70.7
THA.LOC104798973 Tarenaya hassleriana HOM05D002552 ORTHO05D002700 2.9e-08 61.2 44 70.5
GSVIVG01032580001 Vitis vinifera HOM05D002552 ORTHO05D002700 2.9e-08 61.2 50 60.0
Hma1.2p1_0572F.1_g181040 Hydrangea macrophylla HOM05D002552 ORTHO05D002700 3.7e-08 60.8 44 68.2
Lsat_1_v5_gn_5_18201 Lactuca sativa HOM05D002552 ORTHO05D002700 3.7e-08 60.8 52 63.5
Nn3g17049 Nelumbo nucifera HOM05D002552 ORTHO05D002700 3.7e-08 60.8 41 70.7
MSTRG.11414 Avicennia marina HOM05D002552 ORTHO05D002700 6.4e-08 60.1 44 72.7
Migut.D01900 Erythranthe guttata HOM05D002552 ORTHO05D002700 6.4e-08 60.1 47 66.0
Eucgr.K02893 Eucalyptus grandis HOM05D002552 ORTHO05D002700 6.4e-08 60.1 45 68.9
Sopen06g027570 Solanum pennellii HOM05D002552 ORTHO05D002700 6.4e-08 60.1 44 72.7
Atru.chr9.2386 Acer truncatum HOM05D002552 ORTHO05D002700 8.3e-08 59.7 40 75.0
Ah.11g046320 Amaranthus hybridus HOM05D002552 ORTHO05D002700 8.3e-08 59.7 38 76.3
CiPaw.12G022400 Carya illinoinensis HOM05D002552 ORTHO05D002700 8.3e-08 59.7 39 76.9
Haze_07423 Corylus avellana HOM05D002552 ORTHO05D002700 8.3e-08 59.7 39 79.5
DCAR_021552 Daucus carota HOM05D002552 ORTHO05D002700 8.3e-08 59.7 51 60.8
SalBow5G5680 Salvia bowleyana HOM05D002552 ORTHO05D002700 8.3e-08 59.7 41 75.6
THA.LOC104821464 Tarenaya hassleriana HOM05D002552 ORTHO05D002700 8.3e-08 59.7 38 76.3
TWI60G0871 Tripterygium wilfordii HOM05D002552 ORTHO05D002700 8.3e-08 59.7 37 81.1
MSTRG.4391 Avicennia marina HOM05D002552 ORTHO05D002700 1.1e-07 59.3 44 70.5
DCAR_011184 Daucus carota HOM05D002552 ORTHO05D002700 1.1e-07 59.3 51 62.7
SGA_v2.0_scaffold25G10855 Striga asiatica HOM05D002552 ORTHO05D002700 1.1e-07 59.3 47 66.0
Actinidia04952 Actinidia chinensis HOM05D002552 ORTHO05D002700 1.4e-07 58.9 40 72.5
PGR083G0864 Punica granatum HOM05D002552 ORTHO05D002700 1.4e-07 58.9 39 74.4
Sc10g0010030 Simmondsia chinensis HOM05D002552 ORTHO05D002700 1.4e-07 58.9 38 78.9
Solyc03g113700.3 Solanum lycopersicum HOM05D002552 ORTHO05D002700 1.4e-07 58.9 44 68.2
Sopen03g032750 Solanum pennellii HOM05D002552 ORTHO05D002700 1.4e-07 58.9 44 68.2
CDE11G0030 Ceratophyllum demersum HOM05D002552 ORTHO05D002700 1.9e-07 58.5 46 65.2
Dinv02655 Davidia involucrata HOM05D002552 ORTHO05D002700 1.9e-07 58.5 44 70.5
Solyc06g071270.3 Solanum lycopersicum HOM05D002552 ORTHO05D002700 1.9e-07 58.5 44 68.2
TWI15G0643 Tripterygium wilfordii HOM05D002552 ORTHO05D002700 1.9e-07 58.5 31 87.1
Aqoxy3G00866 Aquilegia oxysepala HOM05D002552 ORTHO05D002700 2.4e-07 58.2 38 73.7
HanXRQChr16g0503521 Helianthus annuus HOM05D002552 ORTHO05D002700 2.4e-07 58.2 52 61.5
Hma1.2p1_0002F.1_g002940 Hydrangea macrophylla HOM05D002552 ORTHO05D002700 2.4e-07 58.2 46 65.2
QL10p013839 Quercus lobata HOM05D002552 ORTHO05D002700 2.4e-07 58.2 31 87.1
THA.LOC104818224 Tarenaya hassleriana HOM05D002552 ORTHO05D002700 2.4e-07 58.2 44 68.2
GSVIVG01007838001 Vitis vinifera HOM05D002552 ORTHO05D002700 2.4e-07 58.2 35 77.1
MSTRG.23075 Avicennia marina HOM05D002552 ORTHO05D002700 4.1e-07 57.4 45 64.4
SalBow3G0953 Salvia bowleyana HOM05D002552 ORTHO05D002700 4.1e-07 57.4 42 66.7
CSS0008001 Camellia sinensis var. sinensis HOM05D002552 ORTHO05D002700 5.4e-07 57.0 55 58.2
CSS0027214 Camellia sinensis var. sinensis HOM05D002552 ORTHO05D002700 5.4e-07 57.0 55 58.2
CiPaw.11G033600 Carya illinoinensis HOM05D002552 ORTHO05D002700 5.4e-07 57.0 31 83.9
Dinv13125 Davidia involucrata HOM05D002552 ORTHO05D002700 5.4e-07 57.0 44 63.6
Oeu005684.2 Olea europaea HOM05D002552 ORTHO05D002700 7.0e-07 56.6 45 62.2
Hund09399 Selenicereus undatus HOM05D002552 ORTHO05D002700 7.0e-07 56.6 38 73.7
SGA_v2.0_scaffold7G04106 Striga asiatica HOM05D002552 ORTHO05D002700 9.2e-07 56.2 42 71.4
unitig_21.g20454 Utricularia gibba HOM05D002552 ORTHO05D002700 2.1e-06 55.1 40 72.5
BcaB05g22905 Brassica carinata HOM05D002552 ORTHO05D002700 2.7e-06 54.7 43 62.8
HanXRQChr11g0327401 Helianthus annuus HOM05D002552 ORTHO05D002700 2.7e-06 54.7 52 59.6
SGA_v2.0_scaffold114G31857 Striga asiatica HOM05D002552 ORTHO05D002700 2.7e-06 54.7 41 70.7
CANSAT80G1172 Cannabis sativa HOM05D002552 ORTHO05D002700 3.5e-06 54.3 50 60.0
Pp3c2_12630 Physcomitrium patens HOM05D002552 ORTHO05D002700 3.5e-06 54.3 31 80.6
Lalb_Chr23g0273051 Lupinus albus HOM05D002552 ORTHO05D002700 4.6e-06 53.9 32 75.0
Thecc.03G002000 Theobroma cacao HOM05D002552 ORTHO05D002700 4.6e-06 53.9 56 55.4
ECA246G1618 Erigeron canadensis HOM05D002552 ORTHO05D002700 6.0e-06 53.5 49 55.1
Lalb_Chr08g0236111 Lupinus albus HOM05D002552 ORTHO05D002700 6.0e-06 53.5 31 77.4
Duzib205G1906 Durio zibethinus HOM05D002552 ORTHO05D002700 7.8e-06 53.1 41 73.2
Mapoly0018s0021 Marchantia polymorpha HOM05D002552 ORTHO05D002700 7.8e-06 53.1 38 65.8
MapolyY_A0004 Marchantia polymorpha HOM05D002552 ORTHO05D002700 7.8e-06 53.1 38 65.8
SEGI_25953 Sequoiadendron giganteum HOM05D002552 ORTHO05D002700 7.8e-06 53.1 41 70.7
PGSC0003DMG400024467 Solanum tuberosum HOM05D002552 ORTHO05D002700 7.8e-06 53.1 42 66.7


User provided reference genes

Program Settings