Gene: Sopen06g027570

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g027570
  • Transcript Identifier Sopen06g027570.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 54481077-54484128 : positive

Gene Family Information

  • ID HOM05D002552
  • #Genes/#Species 266/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g027570.1

Descriptions

  • Description RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | LOCATED IN: chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
InterProubiquitin-protein transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030014
IEA
InterProCCR4-NOT complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR039515 NOT4, modified RING finger, HC subclass (C4C4-type)
IPR039780 CCR4-NOT transcription complex subunit 4
Mapman id Description
19.2.2.1.4.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-C2-class E3 ligase