Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002449 Vanilla planifolia HOM05D000538 ORTHO05D000614 8.1e-205 717.2 473 100.0
HPP92_013621 Vanilla planifolia HOM05D000538 ORTHO05D000614 5.2e-18 96.7 432 26.6
Dinv10905 Davidia involucrata HOM05D000538 ORTHO05D000614 4.5e-14 83.6 305 28.2
Lj8P121T27 Lonicera japonica HOM05D000538 ORTHO05D000614 2.8e-11 74.3 245 27.3
Nn1g03728 Nelumbo nucifera HOM05D000538 ORTHO05D000614 4.7e-11 73.6 315 24.1
HPP92_004943 Vanilla planifolia HOM05D000538 ORTHO05D000614 1.4e-10 72.0 171 28.7
Sed0011252 Sechium edule HOM05D000538 ORTHO05D000614 2.3e-10 71.2 288 26.7
Gohir.D10G203100 Gossypium hirsutum HOM05D000538 ORTHO05D000614 4.0e-10 70.5 309 25.9
Gorai.011G228000 Gossypium raimondii HOM05D000538 ORTHO05D000614 4.0e-10 70.5 309 25.9
TAR629G2738 Trochodendron aralioides HOM05D000538 ORTHO05D000614 5.2e-10 70.1 301 27.9
MD09G1103400 Malus domestica HOM05D000538 ORTHO05D000614 8.9e-10 69.3 303 25.7
Gohir.A10G196200 Gossypium hirsutum HOM05D000538 ORTHO05D000614 1.5e-09 68.6 309 26.5
Thecc.07G148000 Theobroma cacao HOM05D000538 ORTHO05D000614 3.4e-09 67.4 287 26.5
TWI38G1831 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 4.4e-09 67.0 309 24.6
Aa31LG2G9100 Aethionema arabicum HOM05D000538 ORTHO05D000614 9.8e-09 65.9 300 29.0
Manes.17G030100 Manihot esculenta HOM05D000538 ORTHO05D000614 1.3e-08 65.5 268 28.4
Gorai.013G021200 Gossypium raimondii HOM05D000538 ORTHO05D000614 1.7e-08 65.1 309 25.2
Lalb_Chr20g0122641 Lupinus albus HOM05D000538 ORTHO05D000614 1.7e-08 65.1 236 25.0
CsaV3_6G049420 Cucumis sativus L. HOM05D000538 ORTHO05D000614 2.2e-08 64.7 302 25.8
Actinidia12491 Actinidia chinensis HOM05D000538 ORTHO05D000614 3.7e-08 63.9 212 27.8
MELO3C027126.2 Cucumis melo HOM05D000538 ORTHO05D000614 4.9e-08 63.5 305 25.9
vmacro12238 Vaccinium macrocarpon HOM05D000538 ORTHO05D000614 4.9e-08 63.5 314 23.9
GSVIVG01002745001 Vitis vinifera HOM05D000538 ORTHO05D000614 4.9e-08 63.5 235 27.2
Gohir.A13G018100 Gossypium hirsutum HOM05D000538 ORTHO05D000614 6.4e-08 63.2 309 24.3
Duzib268G1429 Durio zibethinus HOM05D000538 ORTHO05D000614 8.3e-08 62.8 301 27.2
Manes.16G016900 Manihot esculenta HOM05D000538 ORTHO05D000614 8.3e-08 62.8 317 24.0
THA.LOC104809520 Tarenaya hassleriana HOM05D000538 ORTHO05D000614 8.3e-08 62.8 284 23.9
TWI38G2228 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 8.3e-08 62.8 302 21.9
CiPaw.09G080200 Carya illinoinensis HOM05D000538 ORTHO05D000614 1.1e-07 62.4 318 26.4
Gohir.A01G040800 Gossypium hirsutum HOM05D000538 ORTHO05D000614 1.1e-07 62.4 328 25.0
Gorai.002G037800 Gossypium raimondii HOM05D000538 ORTHO05D000614 1.1e-07 62.4 328 25.3
PGSC0003DMG400026196 Solanum tuberosum HOM05D000538 ORTHO05D000614 1.1e-07 62.4 225 27.1
TAR627G0243 Trochodendron aralioides HOM05D000538 ORTHO05D000614 1.1e-07 62.4 191 29.3
Dinv18544 Davidia involucrata HOM05D000538 ORTHO05D000614 1.4e-07 62.0 309 23.9
Duzib213G0266 Durio zibethinus HOM05D000538 ORTHO05D000614 1.9e-07 61.6 287 26.1
Nn4g26474 Nelumbo nucifera HOM05D000538 ORTHO05D000614 1.9e-07 61.6 329 23.1
Peaxi162Scf00007g00141 Petunia axillaris HOM05D000538 ORTHO05D000614 1.9e-07 61.6 248 25.8
ECA236G5057 Erigeron canadensis HOM05D000538 ORTHO05D000614 2.4e-07 61.2 220 27.7
CANSAT54G1163 Cannabis sativa HOM05D000538 ORTHO05D000614 3.2e-07 60.8 286 25.2
Sopen07g026360 Solanum pennellii HOM05D000538 ORTHO05D012213 3.2e-07 60.8 305 24.3
DCAR_009695 Daucus carota HOM05D000538 ORTHO05D000614 5.4e-07 60.1 191 28.8
DCAR_015700 Daucus carota HOM05D000538 ORTHO05D000614 5.4e-07 60.1 212 25.0
Glyma.05G088300 Glycine max HOM05D000538 ORTHO05D000614 5.4e-07 60.1 226 28.3
CSS0022087 Camellia sinensis var. sinensis HOM05D000538 ORTHO05D000614 7.0e-07 59.7 238 29.0
DCAR_024903 Daucus carota HOM05D000538 ORTHO05D000614 7.0e-07 59.7 107 30.8
RcHm_v2.0_Chr2g0160351 Rosa chinensis HOM05D000538 ORTHO05D000614 7.0e-07 59.7 315 24.1
Solyc07g052900.1 Solanum lycopersicum HOM05D000538 ORTHO05D000614 7.0e-07 59.7 236 26.7
Sopen07g026450 Solanum pennellii HOM05D000538 ORTHO05D012213 7.0e-07 59.7 236 26.7
CARHR232610 Cardamine hirsuta HOM05D000538 ORTHO05D000614 1.6e-06 58.5 214 29.4
CANSAT64G0769 Cannabis sativa HOM05D000538 ORTHO05D000614 2.7e-06 57.8 292 24.7
Manes.07G017600 Manihot esculenta HOM05D000538 ORTHO05D000614 2.7e-06 57.8 313 23.3
Duzib213G0460 Durio zibethinus HOM05D000538 ORTHO05D000614 3.5e-06 57.4 303 27.1
Lju1220C3T4 Lonicera japonica HOM05D000538 ORTHO05D000614 3.5e-06 57.4 235 28.1
Sp7g04750 Schrenkiella parvula HOM05D000538 ORTHO05D000614 3.5e-06 57.4 285 24.6
SGA_v2.0_scaffold62G21365 Striga asiatica HOM05D000538 ORTHO05D000614 3.5e-06 57.4 186 26.3
AL3G53940 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 4.6e-06 57.0 275 26.2
Nitab4.5_0003429g0050 Nicotiana tabacum HOM05D000538 ORTHO05D000614 6.0e-06 56.6 323 24.1
Hma1.2p1_0439F.1_g153220 Hydrangea macrophylla HOM05D000538 ORTHO05D000614 7.8e-06 56.2 180 27.8
PGSC0003DMG400026195 Solanum tuberosum HOM05D000538 ORTHO05D012213 7.8e-06 56.2 238 26.5


User provided reference genes

Program Settings