Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 0.0e+00 1385.5 699 100.0
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 7.6e-268 927.2 674 68.5
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 1.3e-262 909.8 692 66.2
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 1.6e-262 909.4 678 67.4
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 9.0e-261 903.7 691 65.8
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 2.6e-260 902.1 679 65.7
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 1.3e-259 899.8 672 67.0
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 2.9e-259 898.7 680 65.6
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 1.9e-258 896.0 677 66.2
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 3.6e-257 891.7 677 67.1
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 2.3e-256 889.0 676 65.2
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 1.9e-255 885.9 659 67.1
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 5.0e-251 871.3 679 64.4
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 6.5e-251 870.9 679 64.8
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 6.5e-251 870.9 675 64.9
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 1.4e-250 869.8 674 65.4
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 2.1e-249 865.9 680 64.4
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 4.6e-249 864.8 675 64.7
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 1.0e-248 863.6 675 65.2
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 3.0e-248 862.1 681 64.3
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 8.8e-248 860.5 673 65.4
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 1.5e-247 859.8 686 63.0
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.6e-247 859.0 687 62.2
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 2.6e-247 859.0 687 62.2
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 7.4e-247 857.4 678 63.6
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 9.7e-247 857.1 678 64.3
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 6.3e-246 854.4 676 63.6
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 1.4e-245 853.2 687 62.0
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 1.5e-244 849.7 677 62.8
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 1.5e-244 849.7 677 62.8
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 1.0e-243 847.0 684 61.7
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 5.0e-243 844.7 687 64.2
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 1.4e-242 843.2 678 62.8
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 2.5e-242 842.4 709 62.5
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 7.2e-242 840.9 682 63.6
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 9.4e-242 840.5 679 62.4
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 1.2e-241 840.1 678 62.1
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 2.1e-241 839.3 675 63.3
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 3.6e-241 838.6 678 62.4
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 4.7e-241 838.2 686 62.4
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 3.9e-240 835.1 675 63.1
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 1.3e-238 830.1 678 63.3
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 2.8e-238 828.9 691 61.2
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 2.4e-237 825.9 693 60.3
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 5.3e-237 824.7 681 60.4
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 7.0e-237 824.3 689 61.8
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 9.1e-237 823.9 696 60.3
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 1.0e-235 820.5 676 61.8
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.7e-235 819.7 736 59.0
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 5.0e-235 818.1 680 62.4
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 1.1e-234 817.0 696 60.1
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 3.2e-234 815.5 685 60.4
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 5.5e-234 814.7 692 61.3
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 5.5e-234 814.7 702 60.4
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 7.2e-234 814.3 680 61.2
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 9.4e-234 813.9 643 65.3
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 1.0e-232 810.4 681 60.2
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 1.4e-232 810.1 681 59.9
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 1.8e-232 809.7 684 59.5
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 5.2e-232 808.1 654 61.6
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 8.8e-232 807.4 687 59.4
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 1.5e-231 806.6 676 59.6
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 5.7e-231 804.7 693 60.2
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 4.8e-230 801.6 675 60.3
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 8.2e-230 800.8 690 60.0
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 2.4e-229 799.3 679 59.8
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 4.5e-228 795.0 685 60.4
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 1.3e-227 793.5 681 58.0
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 6.5e-227 791.2 680 59.1
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 5.5e-226 788.1 680 59.0
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 6.1e-225 784.6 718 58.1
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 1.0e-224 783.9 728 55.6
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 2.3e-224 782.7 692 58.8
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 4.0e-224 781.9 694 58.6
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 4.0e-224 781.9 679 59.9
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 1.2e-223 780.4 688 59.7
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 3.4e-223 778.9 687 58.7
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 3.4e-223 778.9 718 57.8
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 5.7e-223 778.1 688 59.4
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 2.8e-222 775.8 690 59.0
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 3.7e-222 775.4 690 59.0
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 6.5e-219 764.6 675 58.7
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 1.8e-213 746.5 696 57.2
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 1.8e-213 746.5 580 62.8
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 5.4e-213 745.0 694 57.9
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 5.4e-213 745.0 694 57.9
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 1.2e-212 743.8 696 57.0
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 2.8e-209 732.6 684 56.3
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 1.4e-208 730.3 1002 43.4
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 2.2e-206 723.0 506 69.6
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 1.1e-205 720.7 724 55.4
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 1.0e-203 714.1 698 52.7
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 6.2e-201 704.9 693 55.3
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 3.1e-200 702.6 681 52.7
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 2.0e-199 699.9 704 50.9
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 2.4e-197 693.0 682 55.7
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 9.2e-197 691.0 511 65.8
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 7.5e-191 671.4 439 72.0
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 3.0e-187 659.4 665 50.1
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 9.6e-178 627.9 416 68.0
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 4.7e-177 625.5 825 44.0
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 6.0e-172 608.6 677 51.4
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 1.3e-171 607.4 541 57.7
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 1.5e-170 604.0 432 67.8
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 2.8e-169 599.7 656 48.9
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 8.1e-169 598.2 534 57.7
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 2.4e-160 570.1 681 43.9
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 7.9e-140 501.9 584 48.3
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 1.8e-139 500.7 547 51.4
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 1.8e-139 500.7 682 42.4
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 1.8e-136 490.7 702 39.2
PRCOL_00000752 Prasinoderma coloniale HOM05D003729 ORTHO05D004384 1.8e-120 437.6 493 45.8
SEGI_15849 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 9.1e-120 435.3 446 53.1
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 2.3e-107 394.0 429 49.0
vmacro10990 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 9.5e-101 372.1 404 51.7
Thecc.05G137700 Theobroma cacao HOM05D003729 ORTHO05D004384 7.0e-88 329.3 294 57.5
SHI40172 Sapria himalayana HOM05D003729 ORTHO05D004384 2.1e-84 317.8 435 42.3
Cfa025239 Carpinus fangiana HOM05D003729 ORTHO05D004384 1.1e-80 305.4 608 34.0
SHI43747 Sapria himalayana HOM05D003729 ORTHO05D004384 2.5e-77 294.3 302 50.7
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 4.3e-77 293.5 647 32.9
SHI42965 Sapria himalayana HOM05D003729 ORTHO05D004384 7.3e-77 292.7 371 43.9
Rhsim06G0100100 Rhododendron simsii HOM05D003729 ORTHO05D004384 2.1e-71 274.6 219 61.6
Oeu059338.2 Olea europaea HOM05D003729 ORTHO05D004384 1.6e-68 265.0 353 46.5
Cpa.g.sc5.183 Carica papaya HOM05D003729 ORTHO05D004384 6.9e-59 233.0 248 50.4
SHI45339 Sapria himalayana HOM05D003729 ORTHO05D004384 2.0e-58 231.5 238 47.9
Lj1A1094G14 Lonicera japonica HOM05D003729 ORTHO05D004384 1.7e-57 228.4 269 52.4
Haze_16229 Corylus avellana HOM05D003729 ORTHO05D004384 4.2e-56 223.8 264 49.6
vmacro10989 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 4.6e-55 220.3 266 46.6
Haze_20210 Corylus avellana HOM05D003729 ORTHO05D004384 1.9e-53 214.9 259 48.3
Haze_20214 Corylus avellana HOM05D003729 ORTHO05D004384 1.9e-53 214.9 259 48.3
Thecc.05G138100 Theobroma cacao HOM05D003729 ORTHO05D004384 9.0e-51 206.1 131 73.3
Cpa.g.sc1212.1 Carica papaya HOM05D003729 ORTHO05D004384 1.2e-50 205.7 133 71.4
SHI46975 Sapria himalayana HOM05D003729 ORTHO05D004384 6.7e-46 189.9 186 49.5
HanXRQChr09g0238921 Helianthus annuus HOM05D003729 ORTHO05D004384 8.7e-46 189.5 107 77.6
Thecc.05G137500 Theobroma cacao HOM05D003729 ORTHO05D004384 3.3e-45 187.6 233 51.1
SEGI_35907 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 2.7e-39 167.9 133 59.4
Haze_20209 Corylus avellana HOM05D003729 ORTHO05D004384 4.3e-37 160.6 102 76.5
Haze_20213 Corylus avellana HOM05D003729 ORTHO05D004384 1.3e-36 159.1 102 75.5
Haze_16233 Corylus avellana HOM05D003729 ORTHO05D004384 4.5e-34 150.6 114 63.2
Gohir.A07G111501 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.9e-33 147.9 86 79.1
Gohir.D02G195125 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.9e-33 147.9 86 79.1
Gohir.D06G065600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.9e-33 147.9 86 79.1
Gohir.D05G190600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.5e-32 144.8 85 77.6
Zm00001eb034510 Zea mays HOM05D003729 ORTHO05D004384 2.5e-32 144.8 105 66.7
Gorai.004G004200 Gossypium raimondii HOM05D003729 ORTHO05D004384 4.2e-32 144.1 103 68.9
AUR62022314 Chenopodium quinoa HOM05D000534 ORTHO05D000389 1.6e-31 142.1 143 51.0
SHI49287 Sapria himalayana HOM05D003729 ORTHO05D004384 2.1e-31 141.7 102 64.7
QL07p009838 Quercus lobata HOM05D003729 ORTHO05D004384 7.9e-31 139.8 114 58.8
SHI44105 Sapria himalayana HOM05D003729 ORTHO05D004384 7.9e-31 139.8 107 56.1
arahy.Tifrunner.gnm1.ann1.7FD8QN Arachis hypogaea HOM05D003729 ORTHO05D004384 3.0e-30 137.9 215 39.5
Haze_16230 Corylus avellana HOM05D003729 ORTHO05D004384 1.6e-28 132.1 79 77.2
SHI46293 Sapria himalayana HOM05D003729 ORTHO05D004384 2.8e-28 131.3 70 80.0
vmacro12362 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.1e-27 129.4 79 74.7
Hund24619 Selenicereus undatus HOM05D003729 ORTHO05D004384 4.1e-27 127.5 180 46.7
Glyma.03G135700 Glycine max HOM05D003729 ORTHO05D004384 5.3e-27 127.1 207 35.7
SHI45328 Sapria himalayana HOM05D003729 ORTHO05D004384 3.4e-26 124.4 70 75.7
Haze_16231 Corylus avellana HOM05D003729 ORTHO05D004384 7.7e-26 123.2 168 40.5
SHI50183 Sapria himalayana HOM05D003729 ORTHO05D004384 3.7e-20 104.4 95 55.8
Zm00001eb284510 Zea mays HOM05D001162 ORTHO05D001218 4.8e-20 104.0 64 68.8
Zm00001eb173210 Zea mays HOM05D001162 ORTHO05D001218 1.1e-19 102.8 64 67.2
Zm00001eb077600 Zea mays HOM05D001162 ORTHO05D029047 1.4e-19 102.4 63 68.3
SHI51948 Sapria himalayana HOM05D003729 ORTHO05D004384 9.1e-19 99.8 188 37.8
SHI38377 Sapria himalayana HOM05D003729 ORTHO05D004384 2.0e-18 98.6 60 71.7
SHI53576 Sapria himalayana HOM05D003729 ORTHO05D004384 1.0e-17 96.3 60 71.7
Haze_16235 Corylus avellana HOM05D003729 ORTHO05D004384 1.1e-16 92.8 101 47.5
SHI46294 Sapria himalayana HOM05D003729 ORTHO05D004384 3.2e-16 91.3 61 65.6
Sabra16G0029600 Salix brachista HOM05D000075 ORTHO05D000073 7.2e-16 90.1 82 54.9
FvH4_3g33711 Fragaria vesca HOM05D003729 ORTHO05D001837 2.7e-15 88.2 98 45.9
Cpa.g.sc5.181 Carica papaya HOM05D003729 ORTHO05D004384 1.8e-14 85.5 56 64.3
SHI49946 Sapria himalayana HOM05D003729 ORTHO05D004384 1.8e-14 85.5 127 37.8
Medtr8g007595 Medicago truncatula HOM05D003729 ORTHO05D004384 5.1e-14 84.0 46 80.4
QL01p046327 Quercus lobata HOM05D003729 ORTHO05D004384 2.6e-13 81.6 50 74.0
QL93p0119_0007 Quercus lobata HOM05D003729 ORTHO05D004384 2.6e-13 81.6 50 74.0
SHI45329 Sapria himalayana HOM05D003729 ORTHO05D004384 1.7e-12 79.0 44 79.5
SHI48245 Sapria himalayana HOM05D003729 ORTHO05D004384 1.7e-12 79.0 60 63.3
Sabra16G0039200 Salix brachista HOM05D002722 ORTHO05D003076 3.7e-12 77.8 77 55.8
SHI44104 Sapria himalayana HOM05D003729 ORTHO05D004384 8.2e-12 76.6 201 33.8
Sabra16G0022500 Salix brachista HOM05D000075 ORTHO05D000073 3.1e-11 74.7 56 62.5
Haze_20208 Corylus avellana HOM05D003729 ORTHO05D004384 9.1e-11 73.2 69 49.3
SHI48244 Sapria himalayana HOM05D003729 ORTHO05D004384 1.0e-09 69.7 39 76.9
SHI40171 Sapria himalayana HOM05D003729 ORTHO05D004384 1.9e-08 65.5 76 53.9
Oeu029504.1 Olea europaea HOM05D003729 ORTHO05D004384 2.5e-08 65.1 95 47.4
SHI50413 Sapria himalayana HOM05D003729 ORTHO05D004384 3.2e-08 64.7 211 31.3
Sabra06G0025400 Salix brachista HOM05D003729 ORTHO05D004384 5.5e-08 63.9 42 71.4
Sabra16G0044400 Salix brachista HOM05D002722 ORTHO05D003076 2.1e-07 62.0 77 49.4
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.0e-06 59.7 93 38.7
SHI50318 Sapria himalayana HOM05D003729 ORTHO05D004384 3.9e-06 57.8 175 32.0
SHI54010 Sapria himalayana HOM05D003729 ORTHO05D004384 6.7e-06 57.0 32 78.1


User provided reference genes

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