Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 0.0e+00 2132.5 1219 100.0
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 9.2e-168 595.5 1267 39.9
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 2.3e-163 580.9 1232 40.0
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 9.8e-162 575.5 1231 41.0
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 3.3e-157 560.5 1264 41.8
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 4.3e-157 560.1 1245 39.7
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 3.6e-156 557.0 1281 37.9
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 1.2e-154 552.0 1271 41.2
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 9.8e-154 548.9 1228 39.4
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 3.7e-153 547.0 1152 42.2
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 8.3e-153 545.8 1215 39.0
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 4.1e-152 543.5 1274 39.6
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 4.6e-151 540.0 1244 39.7
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 7.8e-151 539.3 1253 39.3
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 8.6e-150 535.8 1220 37.5
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 1.1e-149 535.4 1243 39.3
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 1.2e-148 531.9 1251 38.6
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 4.7e-148 530.0 1294 38.6
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 6.2e-148 529.6 1235 38.6
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 8.1e-148 529.3 1344 35.8
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 1.3e-145 521.9 1308 37.8
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 2.2e-145 521.2 1304 37.9
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 4.9e-145 520.0 1162 39.2
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 1.1e-144 518.8 1236 38.0
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 7.8e-143 512.7 1278 40.7
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 1.0e-142 512.3 1282 38.1
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 1.0e-142 512.3 1213 38.5
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 1.0e-142 512.3 1256 38.9
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 2.3e-142 511.1 1272 36.4
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 6.6e-142 509.6 1315 39.0
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 1.5e-141 508.4 1180 39.8
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 1.5e-141 508.4 1285 37.4
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 4.3e-141 506.9 1269 37.0
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.2e-140 505.4 1218 40.0
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 2.8e-140 504.2 1391 36.2
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 3.6e-140 503.8 1189 38.1
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 4.7e-140 503.4 1290 38.5
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 8.1e-140 502.7 1326 37.6
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 2.4e-139 501.1 1351 36.3
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 2.4e-139 501.1 1270 37.2
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 4.0e-139 500.4 1278 37.9
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 3.4e-138 497.3 1304 37.4
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 3.4e-138 497.3 1267 37.7
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 9.9e-138 495.7 1298 37.7
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 2.2e-137 494.6 1196 37.9
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 8.4e-137 492.7 1303 36.1
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 3.2e-136 490.7 1363 37.1
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 3.2e-136 490.7 1304 38.0
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 4.2e-136 490.3 1296 37.6
Atru.chr11.1750 Acer truncatum HOM05D004594 ORTHO05D005225 2.1e-135 488.0 730 49.9
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 3.5e-135 487.3 1306 37.7
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 3.5e-135 487.3 917 43.1
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 1.1e-133 482.3 1248 36.5
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 4.3e-133 480.3 1294 35.5
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 1.6e-132 478.4 1340 38.8
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 1.6e-132 478.4 1173 37.8
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 6.2e-132 476.5 1255 36.2
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 8.4e-129 466.1 1321 36.4
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 9.3e-128 462.6 1243 37.9
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 2.7e-127 461.1 1221 39.1
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 6.0e-127 459.9 1358 37.4
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 3.0e-126 457.6 1194 38.9
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 8.7e-126 456.1 1199 37.9
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 8.7e-126 456.1 1200 36.5
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 1.5e-125 455.3 1383 35.2
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 3.3e-125 454.1 1207 35.9
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 3.3e-125 454.1 1353 34.7
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 5.6e-125 453.4 1226 36.6
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 9.6e-125 452.6 1348 34.9
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 2.6e-122 444.5 1327 35.4
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 1.3e-121 442.2 1196 38.5
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 2.2e-121 441.4 1171 37.5
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 5.5e-120 436.8 1153 36.1
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 7.1e-120 436.4 1198 39.2
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 9.3e-120 436.0 1404 34.4
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 7.9e-119 433.0 1248 36.3
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 1.8e-118 431.8 1204 38.6
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 3.0e-118 431.0 1170 35.5
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 5.1e-118 430.3 1320 33.9
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 1.1e-117 429.1 1340 35.2
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 1.1e-117 429.1 1145 36.6
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 5.6e-117 426.8 1203 38.6
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 2.8e-116 424.5 1184 38.3
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 2.8e-116 424.5 1184 38.3
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 1.8e-115 421.8 1142 37.5
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 4.0e-115 420.6 1156 36.2
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 1.2e-114 419.1 1199 38.0
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 4.9e-113 413.7 1194 37.4
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 1.9e-112 411.8 1145 36.6
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 1.8e-110 405.2 1235 35.9
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 3.0e-110 404.4 1002 39.0
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 5.9e-106 390.2 1367 33.7
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 9.3e-104 382.9 1237 34.9
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 3.9e-102 377.5 1226 33.7
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 7.4e-101 373.2 1204 34.5
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.6e-100 372.1 1062 33.6
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 1.1e-99 369.4 1499 31.1
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 1.0e-97 362.8 1245 33.9
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 1.6e-95 355.5 1278 33.8
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 4.4e-77 294.3 1177 29.3
Gohir.A04G146601 Gossypium hirsutum HOM05D004594 ORTHO05D005225 6.5e-73 280.4 587 43.4
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 5.2e-70 270.8 982 33.2
unitig_52.g17301 Utricularia gibba HOM05D004594 ORTHO05D005225 5.7e-69 267.3 776 34.1
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 1.3e-65 256.1 1125 32.1
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 1.3e-57 229.6 1091 30.5
Os06g0562700 Oryza sativa ssp. japonica HOM05D004594 ORTHO05D005225 7.8e-50 203.8 373 42.1
C02p51140 Brassica napus HOM05D004594 ORTHO05D005225 3.0e-49 201.8 1037 27.7
Gohir.1Z049516 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.5e-48 199.5 526 33.7
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 1.1e-38 166.8 800 30.6
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 1.8e-38 166.0 735 31.6
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 8.9e-38 163.7 1214 24.2
Lj3E852T1 Lonicera japonica HOM05D004594 ORTHO05D005225 3.4e-37 161.8 196 46.4
CBR_g5747 Chara braunii HOM05D004594 ORTHO05D005225 2.1e-34 152.5 160 40.6
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 1.0e-33 150.2 619 24.7
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 1.3e-33 149.8 1149 24.6
Oeu034639.1 Olea europaea HOM05D004594 ORTHO05D005225 7.8e-26 124.0 184 46.7
Lj3E852G2 Lonicera japonica HOM05D004594 ORTHO05D005225 9.6e-24 117.1 242 40.9
Oeu032954.1 Olea europaea HOM05D004594 ORTHO05D005225 2.8e-23 115.5 93 62.4
Atru.chr11.1748 Acer truncatum HOM05D004594 ORTHO05D005225 3.6e-23 115.2 187 41.7
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 1.5e-21 109.8 532 27.3
MBI02_g24139_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 2.2e-20 105.9 71 69.0
Rhsim04G0150600 Rhododendron simsii HOM05D004594 ORTHO05D005225 4.9e-20 104.8 116 52.6
unitig_52.g17300 Utricularia gibba HOM05D004594 ORTHO05D005225 1.2e-18 100.1 211 38.9
MBI02_g24140_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 9.6e-16 90.5 132 44.7
Lsat_1_v5_gn_3_92661 Lactuca sativa HOM05D004594 ORTHO05D005225 5.3e-14 84.7 95 46.3
Lsat_1_v5_gn_4_108040 Lactuca sativa HOM05D004594 ORTHO05D005225 4.5e-13 81.6 64 56.2
BolC2t11204H Brassica oleracea HOM05D004594 ORTHO05D005225 4.2e-11 75.1 142 33.1
MBI05_g14664_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 5.4e-11 74.7 50 66.0
Lsat_1_v5_gn_1_53021 Lactuca sativa HOM05D004594 ORTHO05D005225 2.3e-09 69.3 71 46.5
CBR_g5749 Chara braunii HOM05D004594 ORTHO05D005225 1.1e-08 67.0 82 53.7
A02p33260 Brassica napus HOM05D004594 ORTHO05D005225 2.5e-08 65.9 51 60.8
Oeu052406.1 Olea europaea HOM05D004594 ORTHO05D005225 5.6e-08 64.7 100 44.0
MBI07_g23220_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 1.1e-06 60.5 94 42.6


User provided reference genes

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