Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001492 Vanilla planifolia HOM05D001415 ORTHO05D001075 7.8e-31 136.7 81 100.0
HPP92_006626 Vanilla planifolia HOM05D001415 ORTHO05D001075 1.5e-13 79.3 86 58.1
HPP92_012600 Vanilla planifolia HOM05D001415 ORTHO05D001075 4.0e-11 71.2 86 52.3
AL4G37150 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 1.4e-08 62.8 78 48.7
AT2G39705 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 1.4e-08 62.8 78 48.7
Glyma.02G248900 Glycine max HOM05D001415 ORTHO05D001075 1.4e-08 62.8 80 53.8
Glyma.14G067500 Glycine max HOM05D001415 ORTHO05D001075 1.9e-08 62.4 79 51.9
Carub.0004s2175 Capsella rubella HOM05D001415 ORTHO05D001075 2.4e-08 62.0 78 48.7
Lsat_1_v5_gn_9_64901 Lactuca sativa HOM05D001415 ORTHO05D001075 2.4e-08 62.0 78 48.7
Atru.chr12.418 Acer truncatum HOM05D001415 ORTHO05D001075 3.2e-08 61.6 40 70.0
CANSAT56G0089 Cannabis sativa HOM05D001415 ORTHO05D001075 4.1e-08 61.2 79 51.9
Duzib114G0513 Durio zibethinus HOM05D001415 ORTHO05D001075 4.1e-08 61.2 33 75.8
Gohir.D13G019500 Gossypium hirsutum HOM05D001415 ORTHO05D001075 4.1e-08 61.2 33 75.8
Gorai.013G021600 Gossypium raimondii HOM05D001415 ORTHO05D001075 4.1e-08 61.2 33 75.8
Manes.10G028700 Manihot esculenta HOM05D001415 ORTHO05D001075 4.1e-08 61.2 63 52.4
THA.LOC104810035 Tarenaya hassleriana HOM05D001415 ORTHO05D001075 4.1e-08 61.2 77 46.8
Thecc.10G036800 Theobroma cacao HOM05D001415 ORTHO05D001075 4.1e-08 61.2 33 75.8
Duzib128G0356 Durio zibethinus HOM05D001415 ORTHO05D001075 5.4e-08 60.8 33 72.7
HanXRQChr10g0312871 Helianthus annuus HOM05D001415 ORTHO05D001075 5.4e-08 60.8 33 72.7
Phvul.008G191701 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 5.4e-08 60.8 79 51.9
Aqoxy2G02269 Aquilegia oxysepala HOM05D001415 ORTHO05D001075 7.1e-08 60.5 79 48.1
CAN.G1366.20 Capsicum annuum HOM05D001415 ORTHO05D001075 7.1e-08 60.5 33 72.7
CARHR134540 Cardamine hirsuta HOM05D001415 ORTHO05D001075 7.1e-08 60.5 78 46.2
MELO3C021616.2 Cucumis melo HOM05D001415 ORTHO05D001075 7.1e-08 60.5 33 75.8
Lsat_1_v5_gn_2_118460 Lactuca sativa HOM05D001415 ORTHO05D001075 7.1e-08 60.5 79 48.1
QL08p060355 Quercus lobata HOM05D001415 ORTHO05D001075 7.1e-08 60.5 33 75.8
SalBow6G6345 Salvia bowleyana HOM05D001415 ORTHO05D001075 7.1e-08 60.5 33 75.8
Sed0008951 Sechium edule HOM05D001415 ORTHO05D001075 7.1e-08 60.5 33 75.8
Haze_17089 Corylus avellana HOM05D001415 ORTHO05D001075 9.2e-08 60.1 79 51.9
PGSC0003DMG400006357 Solanum tuberosum HOM05D001415 ORTHO05D001075 9.2e-08 60.1 64 51.6
Os03g0272900 Oryza sativa ssp. japonica HOM05D001415 ORTHO05D001075 1.2e-07 59.7 32 75.0
Cfa001452 Carpinus fangiana HOM05D001415 ORTHO05D001075 1.6e-07 59.3 79 51.9
ECA238G4842 Erigeron canadensis HOM05D001415 ORTHO05D001075 1.6e-07 59.3 79 48.1
Prupe.2G237800 Prunus persica HOM05D001415 ORTHO05D001075 1.6e-07 59.3 42 61.9
Actinidia02936 Actinidia chinensis HOM05D001415 ORTHO05D001075 2.1e-07 58.9 79 49.4
Ca_05883_v3 Cicer arietinum L. HOM05D001415 ORTHO05D001075 2.1e-07 58.9 79 49.4
Cc02_g07600 Coffea canephora HOM05D001415 ORTHO05D001075 2.1e-07 58.9 78 50.0
Eucgr.J01236 Eucalyptus grandis HOM05D001415 ORTHO05D001075 2.1e-07 58.9 33 72.7
HanXRQChr07g0201511 Helianthus annuus HOM05D001415 ORTHO05D001075 2.1e-07 58.9 79 48.1
Lalb_Chr17g0346301 Lupinus albus HOM05D001415 ORTHO05D001075 2.1e-07 58.9 82 47.6
Nn2g11165 Nelumbo nucifera HOM05D001415 ORTHO05D001075 2.1e-07 58.9 78 47.4
Potri.010G201700 Populus trichocarpa HOM05D001415 ORTHO05D001075 2.1e-07 58.9 78 51.3
RcHm_v2.0_Chr1g0367921 Rosa chinensis HOM05D001415 ORTHO05D001075 2.1e-07 58.9 33 72.7
MD01G1136300 Malus domestica HOM05D001415 ORTHO05D001075 2.7e-07 58.5 41 61.0
Manes.07G117800 Manihot esculenta HOM05D001415 ORTHO05D001075 2.7e-07 58.5 78 50.0
HanXRQChr09g0250171 Helianthus annuus HOM05D001415 ORTHO05D001075 3.5e-07 58.2 78 46.2
Hma1.2p1_1480F.1_g286050 Hydrangea macrophylla HOM05D001415 ORTHO05D001075 3.5e-07 58.2 63 49.2
MBI05_g29691_MAGBIO Magnolia biondii HOM05D001415 ORTHO05D001075 3.5e-07 58.2 90 50.0
Potri.008G035900 Populus trichocarpa HOM05D001415 ORTHO05D001075 3.5e-07 58.2 34 67.6
Glyma.10G208500 Glycine max HOM05D001415 ORTHO05D001075 4.6e-07 57.8 34 70.6
Gohir.A05G348600 Gossypium hirsutum HOM05D001415 ORTHO05D001075 4.6e-07 57.8 37 67.6
Gohir.A10G220900 Gossypium hirsutum HOM05D001415 ORTHO05D001075 4.6e-07 57.8 33 72.7
Gohir.D04G063900 Gossypium hirsutum HOM05D001415 ORTHO05D001075 4.6e-07 57.8 37 67.6
Gohir.D10G233100 Gossypium hirsutum HOM05D001415 ORTHO05D001075 4.6e-07 57.8 33 72.7
Gorai.011G266700 Gossypium raimondii HOM05D001415 ORTHO05D001075 4.6e-07 57.8 33 72.7
Gorai.012G071500 Gossypium raimondii HOM05D001415 ORTHO05D001075 4.6e-07 57.8 37 67.6
MBI14_g04657_MAGBIO Magnolia biondii HOM05D001415 ORTHO05D001075 4.6e-07 57.8 79 45.6
BcaC02g12100 Brassica carinata HOM05D001415 ORTHO05D001075 6.0e-07 57.4 78 43.6
A05p06700 Brassica napus HOM05D001415 ORTHO05D001075 6.0e-07 57.4 78 43.6
C04p07830 Brassica napus HOM05D001415 ORTHO05D001075 6.0e-07 57.4 78 43.6
BolC4t22402H Brassica oleracea HOM05D001415 ORTHO05D001075 6.0e-07 57.4 78 43.6
BraA05t19637Z Brassica rapa HOM05D001415 ORTHO05D001075 6.0e-07 57.4 78 43.6
CiPaw.01G289500 Carya illinoinensis HOM05D001415 ORTHO05D001075 6.0e-07 57.4 79 49.4
CiPaw.02G185400 Carya illinoinensis HOM05D001415 ORTHO05D001075 6.0e-07 57.4 79 46.8
Gohir.A13G018500 Gossypium hirsutum HOM05D001415 ORTHO05D001075 6.0e-07 57.4 79 45.6
Os01g0972300 Oryza sativa ssp. japonica HOM05D001415 ORTHO05D001075 6.0e-07 57.4 35 65.7
BcaB02g09096 Brassica carinata HOM05D001415 ORTHO05D001075 7.8e-07 57.0 78 43.6
CSS0013409 Camellia sinensis var. sinensis HOM05D001415 ORTHO05D001075 7.8e-07 57.0 65 56.9
Dinv26032 Davidia involucrata HOM05D000371 ORTHO05D008019 7.8e-07 57.0 31 77.4
SalBow1G2982 Salvia bowleyana HOM05D000007 ORTHO05D000521 7.8e-07 57.0 33 69.7
Carub.0005s2224 Capsella rubella HOM05D001415 ORTHO05D001075 1.0e-06 56.6 41 61.0
Potri.008G057800 Populus trichocarpa HOM05D001415 ORTHO05D001075 1.0e-06 56.6 78 48.7
Potri.010G226250 Populus trichocarpa HOM05D001415 ORTHO05D001075 1.0e-06 56.6 34 64.7
Sp4g21960 Schrenkiella parvula HOM05D001415 ORTHO05D001075 1.0e-06 56.6 81 44.4
BcaB06g29109 Brassica carinata HOM05D001415 ORTHO05D001075 1.3e-06 56.2 78 42.3
Sed0019804 Sechium edule HOM05D001415 ORTHO05D001075 1.3e-06 56.2 33 66.7
HPP92_018137 Vanilla planifolia HOM05D001415 ORTHO05D001075 1.3e-06 56.2 62 46.8
Zm00001eb367930 Zea mays HOM05D001415 ORTHO05D001075 1.3e-06 56.2 40 62.5
PSO274G0001 Papaver somniferum HOM05D001415 ORTHO05D001075 1.7e-06 55.8 58 48.3
PSO513G0025 Papaver somniferum HOM05D001415 ORTHO05D001075 1.7e-06 55.8 58 48.3
Phvul.007G235700 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 1.7e-06 55.8 33 66.7
TPR.G3500 Trifolium pratense HOM05D001415 ORTHO05D001075 1.7e-06 55.8 79 44.3
MELO3C019818.2 Cucumis melo HOM05D001415 ORTHO05D001075 2.3e-06 55.5 44 59.1
CsaV3_6G036630 Cucumis sativus L. HOM05D001415 ORTHO05D001075 2.3e-06 55.5 44 59.1
DCAR_020825 Daucus carota HOM05D001415 ORTHO05D001075 2.3e-06 55.5 34 61.8
Thhalv10017695m.g Eutrema salsugineum HOM05D001415 ORTHO05D001075 2.3e-06 55.5 78 43.6
Glyma.20G182300 Glycine max HOM05D001415 ORTHO05D001075 2.3e-06 55.5 33 66.7
MD07G1201200 Malus domestica HOM05D001415 ORTHO05D001075 2.3e-06 55.5 76 50.0
Phvul.007G098400 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 2.3e-06 55.5 33 69.7
Sed0003934 Sechium edule HOM05D001415 ORTHO05D001075 2.3e-06 55.5 61 49.2
Sed0021325 Sechium edule HOM05D001415 ORTHO05D001075 2.3e-06 55.5 38 52.6
THA.LOC109117081 Tarenaya hassleriana HOM05D001415 ORTHO05D001075 2.3e-06 55.5 79 45.6
HPP92_027005 Vanilla planifolia HOM05D001415 ORTHO05D001075 2.3e-06 55.5 53 56.6
Zm00001eb362230 Zea mays HOM05D001415 ORTHO05D001075 2.3e-06 55.5 31 71.0
AL5G36670 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 3.0e-06 55.1 42 54.8
AT3G55515 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 3.0e-06 55.1 42 54.8
Ciclev10033183m.g Citrus clementina HOM05D001415 ORTHO05D001075 3.0e-06 55.1 80 45.0
Migut.F01456 Erythranthe guttata HOM05D001415 ORTHO05D001075 3.0e-06 55.1 62 51.6
Hma1.2p1_0998F.1_g246100 Hydrangea macrophylla HOM05D001415 ORTHO05D001075 3.0e-06 55.1 78 46.2
Medtr5g080260 Medicago truncatula HOM05D001415 ORTHO05D001075 3.0e-06 55.1 79 48.1
Os05g0458200 Oryza sativa ssp. japonica HOM05D001415 ORTHO05D001075 3.0e-06 55.1 32 71.9
MELO3C023874.2 Cucumis melo HOM05D001415 ORTHO05D001075 3.9e-06 54.7 79 43.0
Glyma.11G220000 Glycine max HOM05D001415 ORTHO05D001075 3.9e-06 54.7 33 66.7
Glyma.18G037400 Glycine max HOM05D001415 ORTHO05D001075 3.9e-06 54.7 33 66.7
Nn2g13402 Nelumbo nucifera HOM05D001415 ORTHO05D001075 3.9e-06 54.7 78 44.9
Phvul.007G098500 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 3.9e-06 54.7 31 67.7
Rhsim03G0133500 Rhododendron simsii HOM05D001415 ORTHO05D001075 3.9e-06 54.7 79 44.3
CARHR165570 Cardamine hirsuta HOM05D001415 ORTHO05D001075 5.1e-06 54.3 41 56.1
ClCG07G003480 Citrullus lanatus HOM05D001415 ORTHO05D001075 5.1e-06 54.3 79 45.6
CsaV3_5G026780 Cucumis sativus L. HOM05D001415 ORTHO05D001075 5.1e-06 54.3 78 46.2
Lj5g0008582 Lotus japonicus HOM05D001415 ORTHO05D001075 5.1e-06 54.3 34 55.9
Lalb_Chr02g0152101 Lupinus albus HOM05D001415 ORTHO05D001075 5.1e-06 54.3 33 63.6
Nn2g11570 Nelumbo nucifera HOM05D001415 ORTHO05D001075 5.1e-06 54.3 33 66.7
Os01g0844200 Oryza sativa ssp. japonica HOM05D001415 ORTHO05D001075 5.1e-06 54.3 62 41.9
Sc10g0001700 Simmondsia chinensis HOM05D001415 ORTHO05D001075 5.1e-06 54.3 78 46.2
TPR.G5599 Trifolium pratense HOM05D001415 ORTHO05D001075 5.1e-06 54.3 38 57.9
Duzib128G1683 Durio zibethinus HOM05D001415 ORTHO05D001075 6.6e-06 53.9 33 57.6
Migut.F01961 Erythranthe guttata HOM05D001415 ORTHO05D001075 6.6e-06 53.9 33 66.7
FAN10G0897 Fragaria x ananassa HOM05D001415 ORTHO05D001075 6.6e-06 53.9 64 53.1
Lsat_1_v5_gn_5_169241 Lactuca sativa HOM05D001415 ORTHO05D001075 6.6e-06 53.9 42 50.0
LjContig00141g0017499 Lotus japonicus HOM05D001415 ORTHO05D001075 6.6e-06 53.9 78 41.0
Nn2g13768 Nelumbo nucifera HOM05D001415 ORTHO05D001075 6.6e-06 53.9 33 63.6
CANSAT80G1980 Cannabis sativa HOM05D001415 ORTHO05D001075 8.6e-06 53.5 33 57.6
DCAR_027603 Daucus carota HOM05D001415 ORTHO05D001075 8.6e-06 53.5 79 53.2
Glyma.20G182200 Glycine max HOM05D001415 ORTHO05D001075 8.6e-06 53.5 34 61.8
TPR.G15833 Trifolium pratense HOM05D001415 ORTHO05D001075 8.6e-06 53.5 32 68.8


User provided reference genes

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