Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 3.0e-188 661.8 348 100.0
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 3.7e-170 601.7 320 99.4
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.3e-111 407.1 269 78.4
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 8.6e-111 404.4 314 69.7
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.1e-110 404.1 268 76.5
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 1.1e-110 404.1 294 72.4
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 1.9e-110 403.3 312 68.9
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 7.3e-110 401.4 306 69.0
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 9.5e-110 401.0 285 73.7
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 1.2e-109 400.6 268 76.5
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 4.7e-109 398.7 268 76.1
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 1.0e-108 397.5 267 75.7
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 1.0e-108 397.5 314 67.2
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 1.4e-108 397.1 268 76.1
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 1.8e-108 396.7 268 76.1
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 2.3e-108 396.4 267 76.8
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 5.2e-108 395.2 322 66.5
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 6.8e-108 394.8 318 66.7
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 1.5e-107 393.7 292 69.9
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 1.5e-107 393.7 345 63.5
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 1.5e-107 393.7 268 75.0
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 3.4e-107 392.5 304 69.7
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.4e-107 392.5 276 72.8
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 4.4e-107 392.1 292 69.9
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 4.4e-107 392.1 268 76.1
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 5.7e-107 391.7 268 75.4
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 5.7e-107 391.7 276 73.2
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 5.7e-107 391.7 276 73.2
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 9.8e-107 391.0 268 74.6
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.3e-106 390.6 276 72.8
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.3e-106 390.6 276 72.8
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.3e-106 390.6 301 68.8
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 2.9e-106 389.4 269 74.7
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 3.7e-106 389.0 333 65.5
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 6.4e-106 388.3 268 74.3
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 6.4e-106 388.3 268 74.3
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 8.3e-106 387.9 313 67.1
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.4e-105 387.1 259 75.7
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 1.4e-105 387.1 265 74.7
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 2.4e-105 386.3 316 66.5
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 2.4e-105 386.3 316 66.5
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 4.1e-105 385.6 321 65.7
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 5.4e-105 385.2 320 64.1
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 9.2e-105 384.4 313 66.8
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 9.2e-105 384.4 327 62.1
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 1.2e-104 384.0 322 64.9
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.6e-104 383.6 279 70.3
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.6e-104 383.6 279 70.3
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 1.6e-104 383.6 268 74.3
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 2.0e-104 383.3 323 62.5
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 2.0e-104 383.3 313 64.9
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 2.0e-104 383.3 277 71.5
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 2.0e-104 383.3 294 68.7
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 2.7e-104 382.9 318 65.1
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 2.7e-104 382.9 275 72.0
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 4.6e-104 382.1 323 62.2
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 4.6e-104 382.1 292 66.8
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 5.9e-104 381.7 267 73.4
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 5.9e-104 381.7 270 72.2
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 7.8e-104 381.3 303 65.7
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 1.0e-103 380.9 324 62.0
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 1.0e-103 380.9 297 66.0
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 1.0e-103 380.9 275 71.6
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 1.3e-103 380.6 327 65.1
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 1.3e-103 380.6 270 71.5
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 3.0e-103 379.4 268 70.9
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 6.6e-103 378.3 268 70.9
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 8.6e-103 377.9 268 70.5
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 1.1e-102 377.5 303 65.7
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 1.5e-102 377.1 362 60.2
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 1.9e-102 376.7 268 71.6
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 5.6e-102 375.2 269 70.6
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 7.3e-102 374.8 269 69.1
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 7.3e-102 374.8 297 67.7
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 9.5e-102 374.4 268 70.5
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 4.7e-101 372.1 277 70.0
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 4.7e-101 372.1 269 72.5
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 8.0e-101 371.3 267 70.4
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 1.0e-100 370.9 269 71.0
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 1.8e-100 370.2 327 60.9
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 2.3e-100 369.8 281 68.0
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 4.0e-100 369.0 344 58.4
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 6.8e-100 368.2 338 58.9
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 2.9e-98 362.8 247 73.3
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 1.3e-95 354.0 317 63.4
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 1.3e-95 354.0 259 70.7
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 2.3e-95 353.2 323 59.4
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 4.3e-94 349.0 242 75.2
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 9.5e-94 347.8 267 69.7
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 2.1e-88 330.1 257 68.5
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 4.6e-88 328.9 274 62.4
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 1.7e-87 327.0 283 59.7
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.5e-86 323.9 347 53.9
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 9.5e-86 321.2 273 61.5
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 2.8e-85 319.7 407 47.4
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 1.8e-84 317.0 412 46.4
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 2.3e-84 316.6 269 64.7
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 1.2e-83 314.3 292 58.6
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 5.8e-83 312.0 284 62.0
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.1e-81 307.8 206 76.2
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 1.7e-79 300.4 307 55.7
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 8.6e-79 298.1 221 71.0
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 5.6e-78 295.4 234 67.1
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 1.9e-70 270.4 288 57.3
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 8.1e-69 265.0 271 53.9
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 5.3e-68 262.3 232 61.2
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 9.0e-68 261.5 263 54.8
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 7.6e-67 258.5 177 72.9
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 6.0e-64 248.8 247 53.8
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.7e-63 247.3 275 54.9
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 2.3e-63 246.9 259 52.1
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 1.9e-62 243.8 352 46.6
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 3.6e-61 239.6 157 76.4
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 4.0e-60 236.1 189 64.0
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.9e-54 217.2 263 47.1
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 9.6e-54 214.9 159 67.9
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 9.0e-52 208.4 179 64.8
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 3.8e-50 203.0 129 78.3
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 3.9e-47 193.0 206 54.4
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 5.7e-46 189.1 130 74.6
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 4.5e-43 179.5 116 80.2
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 4.8e-37 159.5 108 69.4
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.2e-35 154.8 256 35.2
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-25 120.6 187 36.9
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 4.2e-25 119.8 182 38.5
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 3.7e-21 106.7 90 62.2
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 1.8e-20 104.4 82 72.0
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 2.7e-11 73.9 66 63.6
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 7.7e-11 72.4 38 92.1
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 3.8e-10 70.1 272 26.1
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 8.8e-07 58.9 36 75.0
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 1.2e-06 58.5 36 77.8


User provided reference genes

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