Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.013G241000 Gossypium raimondii HOM05D053396 ORTHO05D046914 1.6e-39 165.6 83 100.0
Gohir.A13G206350 Gossypium hirsutum HOM05D053396 ORTHO05D046914 4.1e-35 151.0 83 94.0
Thecc.05G331300 Theobroma cacao HOM05D001060 ORTHO05D000905 5.0e-09 64.3 71 52.1
Gohir.A11G261900 Gossypium hirsutum HOM05D001060 ORTHO05D000905 6.5e-09 63.9 71 50.7
Gohir.D11G271900 Gossypium hirsutum HOM05D001060 ORTHO05D000905 1.5e-08 62.8 71 49.3
Gorai.007G292800 Gossypium raimondii HOM05D001060 ORTHO05D000905 1.5e-08 62.8 71 49.3
Duzib177G0101 Durio zibethinus HOM05D001060 ORTHO05D000905 2.5e-08 62.0 71 50.7
Cfa004404 Carpinus fangiana HOM05D001060 ORTHO05D000905 4.2e-08 61.2 71 49.3
COL.COLO4_05474 Corchorus olitorius HOM05D001060 ORTHO05D000905 4.2e-08 61.2 71 50.7
Haze_15002 Corylus avellana HOM05D001060 ORTHO05D000905 7.2e-08 60.5 71 49.3
Phvul.001G221100 Phaseolus vulgaris HOM05D001060 ORTHO05D000905 9.4e-08 60.1 71 47.9
QL03p011389 Quercus lobata HOM05D001060 ORTHO05D000905 9.4e-08 60.1 71 49.3
Atru.chr12.1504 Acer truncatum HOM05D001060 ORTHO05D000905 1.6e-07 59.3 71 47.9
Atru.chr12.1508 Acer truncatum HOM05D001060 ORTHO05D000905 1.6e-07 59.3 71 47.9
CANSAT54G1448 Cannabis sativa HOM05D001060 ORTHO05D000905 1.6e-07 59.3 71 46.5
Gorai.013G203900 Gossypium raimondii HOM05D001060 ORTHO05D000905 2.1e-07 58.9 71 47.9
CiPaw.08G121400 Carya illinoinensis HOM05D001060 ORTHO05D000905 8.0e-07 57.0 71 45.1
Gohir.A13G172900 Gossypium hirsutum HOM05D001060 ORTHO05D000905 8.0e-07 57.0 71 46.5
Gohir.D13G178700 Gossypium hirsutum HOM05D001060 ORTHO05D000905 1.0e-06 56.6 71 46.5
THA.LOC104816836 Tarenaya hassleriana HOM05D001060 ORTHO05D000905 1.0e-06 56.6 71 45.1
THA.LOC104820387 Tarenaya hassleriana HOM05D001060 ORTHO05D000905 1.0e-06 56.6 71 45.1
VMungo1383G3706 Vigna mungo HOM05D001060 ORTHO05D000905 1.8e-06 55.8 71 46.5
AT1G09570 Arabidopsis thaliana HOM05D001060 ORTHO05D000905 2.3e-06 55.5 71 45.1
Ca_09265_v3 Cicer arietinum L. HOM05D001060 ORTHO05D000905 2.3e-06 55.5 71 45.1
arahy.Tifrunner.gnm1.ann1.7E2TSQ Arachis hypogaea HOM05D001060 ORTHO05D000905 3.0e-06 55.1 71 46.5
arahy.Tifrunner.gnm1.ann1.D04KR2 Arachis hypogaea HOM05D001060 ORTHO05D000905 3.0e-06 55.1 71 46.5
Manes.09G182500 Manihot esculenta HOM05D001060 ORTHO05D000905 3.0e-06 55.1 71 42.3
Lalb_Chr06g0167211 Lupinus albus HOM05D001060 ORTHO05D000905 4.0e-06 54.7 71 46.5
Prupe.6G302500 Prunus persica HOM05D001060 ORTHO05D000905 4.0e-06 54.7 71 43.7
AL1G20090 Arabidopsis lyrata HOM05D001060 ORTHO05D000905 5.2e-06 54.3 71 43.7
arahy.Tifrunner.gnm1.ann1.NNA8KD Arachis hypogaea HOM05D001060 ORTHO05D000905 5.2e-06 54.3 73 45.2
CSS0032712 Camellia sinensis var. sinensis HOM05D001060 ORTHO05D000905 5.2e-06 54.3 71 46.5
Lj5g0019635 Lotus japonicus HOM05D001060 ORTHO05D000905 5.2e-06 54.3 74 47.3
MD04G1183900 Malus domestica HOM05D001060 ORTHO05D000905 5.2e-06 54.3 71 43.7
Carub.0001s0891 Capsella rubella HOM05D001060 ORTHO05D000905 6.8e-06 53.9 71 43.7
Ciclev10027712m.g Citrus clementina HOM05D001060 ORTHO05D000905 6.8e-06 53.9 71 43.7
Lalb_Chr21g0309961 Lupinus albus HOM05D001060 ORTHO05D000905 6.8e-06 53.9 71 45.1
TWI56G0840 Tripterygium wilfordii HOM05D001060 ORTHO05D000905 6.8e-06 53.9 71 43.7
Thhalv10006625m.g Eutrema salsugineum HOM05D001060 ORTHO05D000905 8.8e-06 53.5 71 43.7
Sp1g08170 Schrenkiella parvula HOM05D001060 ORTHO05D000905 8.8e-06 53.5 71 43.7
GSVIVG01031354001 Vitis vinifera HOM05D001060 ORTHO05D000905 8.8e-06 53.5 71 47.9


User provided reference genes

Program Settings