Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.009G243000 Gossypium raimondii HOM05D004729 ORTHO05D005451 1.2e-208 729.6 364 100.0
Gohir.D05G234700 Gossypium hirsutum HOM05D004729 ORTHO05D005451 1.9e-198 695.7 350 98.3
Gohir.A05G236400 Gossypium hirsutum HOM05D004729 ORTHO05D005451 1.8e-191 672.5 352 94.6
Thecc.08G118600 Theobroma cacao HOM05D004729 ORTHO05D005451 8.0e-168 594.0 356 81.7
Duzib093G1993 Durio zibethinus HOM05D004729 ORTHO05D005451 2.4e-164 582.4 339 84.4
Duzib116G0142 Durio zibethinus HOM05D004729 ORTHO05D005451 2.7e-163 578.9 319 88.7
Prupe.1G503900 Prunus persica HOM05D004729 ORTHO05D005451 3.1e-143 512.3 334 74.0
MD08G1169900 Malus domestica HOM05D004729 ORTHO05D005451 4.4e-142 508.4 349 71.9
MD15G1356700 Malus domestica HOM05D004729 ORTHO05D005451 1.3e-141 506.9 325 75.1
Ciclev10001583m.g Citrus clementina HOM05D004729 ORTHO05D005451 4.9e-141 505.0 352 71.0
Potri.002G087700 Populus trichocarpa HOM05D004729 ORTHO05D005451 6.4e-141 504.6 342 74.0
Dinv07919 Davidia involucrata HOM05D004729 ORTHO05D005451 1.1e-140 503.8 337 72.4
THA.LOC104817066 Tarenaya hassleriana HOM05D004729 ORTHO05D005451 4.1e-140 501.9 338 71.3
FAN15G1542 Fragaria x ananassa HOM05D004729 ORTHO05D005451 1.6e-139 500.0 332 74.1
CSS0005799 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 2.0e-139 499.6 325 74.2
Psat5g133600 Pisum sativum HOM05D004729 ORTHO05D005451 4.6e-139 498.4 327 73.1
GSVIVG01008929001 Vitis vinifera HOM05D004729 ORTHO05D005451 6.0e-139 498.0 324 74.4
Cpa.g.sc36.9 Carica papaya HOM05D004729 ORTHO05D005451 1.3e-138 496.9 320 73.1
FAN27G3155 Fragaria x ananassa HOM05D004729 ORTHO05D005451 1.3e-138 496.9 332 73.8
FAN24G1570 Fragaria x ananassa HOM05D004729 ORTHO05D005451 1.7e-138 496.5 332 73.8
RcHm_v2.0_Chr6g0294871 Rosa chinensis HOM05D004729 ORTHO05D005451 2.3e-138 496.1 334 71.6
FvH4_2g26260 Fragaria vesca HOM05D004729 ORTHO05D005451 3.9e-138 495.4 335 72.8
Manes.02G159900 Manihot esculenta HOM05D004729 ORTHO05D005451 1.5e-137 493.4 350 70.3
Lalb_Chr23g0270821 Lupinus albus HOM05D004729 ORTHO05D005451 3.3e-137 492.3 329 71.4
Potri.005G173000 Populus trichocarpa HOM05D004729 ORTHO05D005451 4.3e-137 491.9 321 74.1
CSS0018062 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 5.6e-137 491.5 328 72.6
TWI56G0049 Tripterygium wilfordii HOM05D004729 ORTHO05D005451 5.6e-137 491.5 327 71.9
Medtr3g073010 Medicago truncatula HOM05D004729 ORTHO05D005451 9.5e-137 490.7 324 72.2
COL.COLO4_38234 Corchorus olitorius HOM05D004729 ORTHO05D005451 1.2e-136 490.3 291 81.8
CANSAT78G0882 Cannabis sativa HOM05D004729 ORTHO05D005451 3.6e-136 488.8 330 71.5
Lj1g0017363 Lotus japonicus HOM05D004729 ORTHO05D005451 6.2e-136 488.0 325 72.3
Aa31LG7G12040 Aethionema arabicum HOM05D004729 ORTHO05D005451 1.4e-135 486.9 334 69.5
arahy.Tifrunner.gnm1.ann1.CLQ5CM Arachis hypogaea HOM05D004729 ORTHO05D005451 2.3e-135 486.1 313 72.5
CiPaw.05G227200 Carya illinoinensis HOM05D004729 ORTHO05D005451 3.1e-135 485.7 332 71.4
TAR628G0451 Trochodendron aralioides HOM05D004729 ORTHO05D005451 3.1e-135 485.7 357 66.7
Eucgr.F03750 Eucalyptus grandis HOM05D004729 ORTHO05D005451 6.8e-135 484.6 324 71.6
PGR042G2886 Punica granatum HOM05D004729 ORTHO05D005451 3.4e-134 482.3 325 72.0
Phvul.009G121400 Phaseolus vulgaris HOM05D004729 ORTHO05D005451 7.5e-134 481.1 329 71.1
Actinidia23053 Actinidia chinensis HOM05D004729 ORTHO05D005451 1.7e-133 479.9 331 69.8
MELO3C012993.2 Cucumis melo HOM05D004729 ORTHO05D005451 1.7e-133 479.9 323 70.3
BcaB05g24351 Brassica carinata HOM05D004729 ORTHO05D005451 6.4e-133 478.0 330 68.8
VMungo1309G0261 Vigna mungo HOM05D004729 ORTHO05D005451 1.1e-132 477.2 329 70.5
arahy.Tifrunner.gnm1.ann1.J2YLH9 Arachis hypogaea HOM05D004729 ORTHO05D005451 1.9e-132 476.5 313 71.2
CsaV3_3G023700 Cucumis sativus L. HOM05D004729 ORTHO05D005451 7.0e-132 474.6 333 67.9
Glyma.04G252900 Glycine max HOM05D004729 ORTHO05D005451 1.6e-131 473.4 341 66.9
AL1G51210 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 2.1e-131 473.0 340 67.4
Sp1g31520 Schrenkiella parvula HOM05D004729 ORTHO05D005451 1.0e-130 470.7 332 67.5
Glyma.06G109600 Glycine max HOM05D004729 ORTHO05D005451 1.3e-130 470.3 341 67.4
CARHR115540 Cardamine hirsuta HOM05D004729 ORTHO05D005451 2.3e-130 469.5 321 69.2
Carub.0004s0560 Capsella rubella HOM05D004729 ORTHO05D005451 5.1e-130 468.4 320 69.7
TAR151G0002 Trochodendron aralioides HOM05D004729 ORTHO05D005451 5.1e-130 468.4 322 70.8
BraA02t06545Z Brassica rapa HOM05D004729 ORTHO05D005451 2.5e-129 466.1 330 69.1
A02p14780 Brassica napus HOM05D004729 ORTHO05D005451 9.5e-129 464.2 330 68.8
BcaC03g14925 Brassica carinata HOM05D004729 ORTHO05D005451 2.8e-128 462.6 333 68.2
C02p24210 Brassica napus HOM05D004729 ORTHO05D005451 2.8e-128 462.6 329 68.7
BolC2t08529H Brassica oleracea HOM05D004729 ORTHO05D005451 2.8e-128 462.6 333 68.2
Hund27047 Selenicereus undatus HOM05D004729 ORTHO05D005451 6.2e-128 461.5 325 68.9
Thhalv10027838m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 1.4e-127 460.3 319 67.7
Sc23g0000860 Simmondsia chinensis HOM05D004729 ORTHO05D005451 1.4e-127 460.3 322 69.3
Carub.0004s0549 Capsella rubella HOM05D004729 ORTHO05D005451 1.8e-127 459.9 322 69.3
AL4G17320 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 3.1e-127 459.1 319 68.7
Haze_00501 Corylus avellana HOM05D004729 ORTHO05D005451 6.8e-127 458.0 349 65.6
Migut.C01178 Erythranthe guttata HOM05D004729 ORTHO05D005451 1.7e-125 453.4 338 66.6
Nn1g08655 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.9e-125 452.6 326 66.9
MSTRG.25403 Avicennia marina HOM05D004729 ORTHO05D005451 3.7e-125 452.2 331 66.2
DCAR_024544 Daucus carota HOM05D004729 ORTHO05D005451 7.1e-124 448.0 319 67.1
Cc10_g10550 Coffea canephora HOM05D004729 ORTHO05D005451 1.2e-123 447.2 317 67.5
C09p08700 Brassica napus HOM05D004729 ORTHO05D005451 1.3e-122 443.7 320 66.2
SGA_v2.0_scaffold52G19009 Striga asiatica HOM05D004729 ORTHO05D005451 1.3e-122 443.7 329 66.0
SalBow7G0963 Salvia bowleyana HOM05D004729 ORTHO05D005451 3.0e-122 442.6 325 66.5
MBI06_g01065_MAGBIO Magnolia biondii HOM05D004729 ORTHO05D005451 5.1e-122 441.8 327 64.8
DCAR_024606 Daucus carota HOM05D004729 ORTHO05D005451 8.6e-122 441.0 323 65.0
SGA_v2.0_scaffold24G10496 Striga asiatica HOM05D004729 ORTHO05D005451 4.3e-121 438.7 322 66.5
Lj4C592G4 Lonicera japonica HOM05D004729 ORTHO05D005451 5.6e-121 438.3 293 71.7
Solyc11g013200.2 Solanum lycopersicum HOM05D004729 ORTHO05D005451 1.4e-119 433.7 329 65.0
HanXRQChr06g0181001 Helianthus annuus HOM05D004729 ORTHO05D005451 3.1e-119 432.6 341 63.6
PSO528G0069 Papaver somniferum HOM05D004729 ORTHO05D005451 8.9e-119 431.0 343 62.1
Sopen11g008240 Solanum pennellii HOM05D004729 ORTHO05D005451 8.9e-119 431.0 351 62.4
BolC9t53782H Brassica oleracea HOM05D004729 ORTHO05D005451 2.0e-118 429.9 334 63.2
BcaC04g23401 Brassica carinata HOM05D004729 ORTHO05D005451 3.4e-118 429.1 326 63.5
PSO170G2478 Papaver somniferum HOM05D004729 ORTHO05D005451 1.7e-117 426.8 346 60.7
ClCG11G010630 Citrullus lanatus HOM05D004729 ORTHO05D005451 2.2e-117 426.4 350 61.1
ECA236G4997 Erigeron canadensis HOM05D004729 ORTHO05D005451 2.2e-117 426.4 321 65.4
CAN.G321.55 Capsicum annuum HOM05D004729 ORTHO05D005451 2.4e-116 422.9 345 61.2
Lsat_1_v5_gn_8_107920 Lactuca sativa HOM05D004729 ORTHO05D005451 5.4e-116 421.8 341 62.2
Sed0026543 Sechium edule HOM05D004729 ORTHO05D005451 1.2e-115 420.6 385 55.3
Ah.05g172360 Amaranthus hybridus HOM05D004729 ORTHO05D005451 1.6e-115 420.2 314 64.0
Nitab4.5_0000494g0050 Nicotiana tabacum HOM05D004729 ORTHO05D005451 4.6e-115 418.7 321 64.2
Oeu017724.4 Olea europaea HOM05D004729 ORTHO05D005451 4.6e-115 418.7 332 63.9
Aqoxy5G04147 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.3e-114 417.2 324 64.5
Lsat_1_v5_gn_3_63181 Lactuca sativa HOM05D004729 ORTHO05D005451 2.3e-114 416.4 341 61.6
Aqoxy1G01637 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 3.9e-114 415.6 324 63.9
AUR62023623 Chenopodium quinoa HOM05D004729 ORTHO05D005451 5.1e-114 415.2 261 72.8
QL09p035890 Quercus lobata HOM05D004729 ORTHO05D005451 1.5e-113 413.7 298 69.1
CAN.G630.60 Capsicum annuum HOM05D004729 ORTHO05D005451 2.5e-113 412.9 322 62.7
AT1G37150 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 2.8e-112 409.5 291 66.7
Peaxi162Scf00679g00006 Petunia axillaris HOM05D004729 ORTHO05D005451 2.8e-112 409.5 322 63.4
Atru.chr13.1337 Acer truncatum HOM05D004729 ORTHO05D005451 4.8e-112 408.7 285 68.1
Atru.chr13.1380 Acer truncatum HOM05D004729 ORTHO05D005451 4.8e-112 408.7 285 68.1
ATR0684G041 Amborella trichopoda HOM05D004729 ORTHO05D005451 5.3e-111 405.2 314 62.1
FAN18G3003 Fragaria x ananassa HOM05D004729 ORTHO05D005451 5.3e-111 405.2 320 65.6
AT2G25710 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 4.2e-108 395.6 277 66.8
HPP92_002257 Vanilla planifolia HOM05D004729 ORTHO05D005451 4.6e-107 392.1 337 57.3
CDE08G0072 Ceratophyllum demersum HOM05D004729 ORTHO05D005451 6.0e-107 391.7 312 59.9
Hma1.2p1_0542F.1_g174920 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 1.7e-106 390.2 263 69.6
Oeu032968.2 Olea europaea HOM05D004729 ORTHO05D005451 3.9e-106 389.0 268 69.0
unitig_46.g18427 Utricularia gibba HOM05D004729 ORTHO05D005451 4.8e-104 382.1 325 59.4
AUR62029101 Chenopodium quinoa HOM05D004729 ORTHO05D005451 2.4e-103 379.8 314 61.1
TPR.G22343 Trifolium pratense HOM05D004729 ORTHO05D005451 1.2e-99 367.5 258 69.0
Thhalv10004827m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 6.0e-99 365.2 229 72.1
Peaxi162Scf00412g00069 Petunia axillaris HOM05D004729 ORTHO05D005451 6.7e-98 361.7 297 60.9
Os02g0167000 Oryza sativa ssp. japonica HOM05D004729 ORTHO05D005451 3.3e-97 359.4 339 51.9
Zm00001eb232860 Zea mays HOM05D004729 ORTHO05D005451 1.6e-96 357.1 337 52.8
Nitab4.5_0000193g0110 Nicotiana tabacum HOM05D004729 ORTHO05D005451 8.1e-96 354.8 347 53.6
EL10Ac1g00023 Beta vulgaris HOM05D004729 ORTHO05D005451 3.1e-95 352.8 364 51.9
SHI32261 Sapria himalayana HOM05D004729 ORTHO05D005451 4.0e-95 352.4 319 55.5
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 1.0e-90 337.8 252 62.7
Pp3c9_4090 Physcomitrium patens HOM05D004729 ORTHO05D005451 7.4e-89 331.6 326 50.6
AagrBONN_evm.TU.Sc2ySwM_117.2782 Anthoceros agrestis HOM05D004729 ORTHO05D005451 6.5e-85 318.5 292 53.8
Lj3g0025484 Lotus japonicus HOM05D004729 ORTHO05D005451 1.9e-84 317.0 189 77.8
Aa31LG6G9140 Aethionema arabicum HOM05D004729 ORTHO05D005451 3.0e-82 309.7 195 73.3
FvH4_5g31361 Fragaria vesca HOM05D004729 ORTHO05D005451 2.5e-81 306.6 176 82.4
Mapoly0100s0036 Marchantia polymorpha HOM05D004729 ORTHO05D005451 1.4e-79 300.8 330 44.8
Rhsim11G0066000 Rhododendron simsii HOM05D004729 ORTHO05D005451 2.5e-76 290.0 362 47.8
CSS0041333 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 2.2e-72 276.9 209 66.5
SalBow7G1557 Salvia bowleyana HOM05D004729 ORTHO05D005451 5.3e-71 272.3 196 66.3
CBR_g4408 Chara braunii HOM05D004729 ORTHO05D005451 3.8e-61 239.6 282 41.8
Nn5g28096 Nelumbo nucifera HOM05D004729 ORTHO05D005451 6.5e-61 238.8 296 45.9
SMO356G0070 Selaginella moellendorffii HOM05D004729 ORTHO05D005451 3.2e-60 236.5 232 50.0
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 1.7e-53 214.2 139 71.9
SEGI_13253 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 1.1e-52 211.5 164 61.0
Nn1g08666 Nelumbo nucifera HOM05D004729 ORTHO05D005451 4.2e-52 209.5 171 59.1
Manes.18G073729 Manihot esculenta HOM05D004729 ORTHO05D005451 4.0e-50 203.0 216 55.1
PRCOL_00005327 Prasinoderma coloniale HOM05D004729 ORTHO05D005451 5.2e-50 202.6 250 44.0
MCO05G148 Micromonas commoda HOM05D004729 ORTHO05D005451 4.8e-48 196.1 243 41.6
A09p07790 Brassica napus HOM05D004729 ORTHO05D005451 9.8e-41 171.8 201 46.8
BraA09t36427Z Brassica rapa HOM05D004729 ORTHO05D005451 3.7e-40 169.9 199 46.7
Cre09.g406000 Chlamydomonas reinhardtii HOM05D004729 ORTHO05D005451 1.1e-39 168.3 276 33.3
SEGI_02892 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 5.0e-37 159.5 155 51.6
Aqoxy356s001 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.5e-36 157.9 122 63.1
Cfa026220 Carpinus fangiana HOM05D004729 ORTHO05D005451 1.7e-32 144.4 350 32.9
FvH4_5g31362 Fragaria vesca HOM05D004729 ORTHO05D005451 5.4e-31 139.4 135 55.6
TPR.G675 Trifolium pratense HOM05D004729 ORTHO05D005451 2.5e-28 130.6 70 84.3
Lalb_Chr11g0065751 Lupinus albus HOM05D004729 ORTHO05D005451 5.8e-25 119.4 181 38.7
arahy.Tifrunner.gnm1.ann1.M1Z3QL Arachis hypogaea HOM05D004729 ORTHO05D005451 2.0e-22 110.9 120 48.3
Hma1.2p1_0009F.1_g006083 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 3.6e-19 100.1 89 59.6
Hma1.2p1_0009F.1_g006090 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 3.6e-19 100.1 89 59.6
Dinv27372 Davidia involucrata HOM05D004729 ORTHO05D005451 9.8e-17 92.0 49 85.7
Sabra02G0069200 Salix brachista HOM05D004729 ORTHO05D005451 1.3e-16 91.7 49 85.7
ECA248G3021 Erigeron canadensis HOM05D004729 ORTHO05D005451 3.7e-16 90.1 71 60.6
Aqoxy5G04170 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.2e-11 75.1 113 40.7
arahy.Tifrunner.gnm1.ann1.7BX7P6 Arachis hypogaea HOM05D004729 ORTHO05D009789 6.8e-10 69.3 58 55.2
Nn1g08661 Nelumbo nucifera HOM05D004729 ORTHO05D005451 9.9e-09 65.5 40 67.5
CSS0043726 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 3.5e-06 57.0 38 60.5


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