Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.009G063500 Gossypium raimondii HOM05D008192 ORTHO05D010301 4.3e-84 314.7 169 100.0
Gohir.A05G060200 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.2e-81 306.6 169 97.0
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 1.8e-58 229.6 171 75.4
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 1.0e-56 223.8 169 74.0
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 4.8e-51 204.9 170 70.6
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.5e-47 193.4 159 69.8
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 1.8e-45 186.4 164 65.9
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 9.8e-44 180.6 154 68.2
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 3.7e-43 178.7 154 67.5
Duzib150G1248 Durio zibethinus HOM05D008192 ORTHO05D010301 5.0e-40 168.3 169 62.1
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.8e-34 149.8 82 98.8
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 1.2e-25 120.6 171 47.4
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 8.6e-24 114.4 173 45.7
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 1.1e-23 114.0 180 45.6
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 1.1e-23 114.0 180 45.6
Ah.10g025590 Amaranthus hybridus HOM05D008192 ORTHO05D010301 1.3e-19 100.5 159 43.4
Hma1.2p1_1685F.1_g297470 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 3.7e-19 99.0 174 42.0
Hma1.2p1_0389F.1_g142520 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 8.3e-19 97.8 174 42.0
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 1.9e-18 96.7 160 38.8
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 1.2e-17 94.0 106 54.7
QL02p018787 Quercus lobata HOM05D008192 ORTHO05D010301 1.6e-17 93.6 171 41.5
Atru.chr7.2557 Acer truncatum HOM05D008192 ORTHO05D010301 4.6e-17 92.0 156 41.7
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 6.0e-17 91.7 169 42.6
Ciclev10009717m.g Citrus clementina HOM05D008192 ORTHO05D010301 1.7e-16 90.1 172 42.4
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 5.1e-16 88.6 173 41.6
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 6.6e-16 88.2 174 38.5
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 8.6e-16 87.8 172 41.9
RcHm_v2.0_Chr6g0299341 Rosa chinensis HOM05D008192 ORTHO05D010301 1.1e-15 87.4 172 40.1
MD08G1055700 Malus domestica HOM05D008192 ORTHO05D010301 1.9e-15 86.7 174 40.2
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 2.5e-15 86.3 159 36.5
AUR62032421 Chenopodium quinoa HOM05D008192 ORTHO05D010301 4.3e-15 85.5 160 38.1
Cc04_g10610 Coffea canephora HOM05D008192 ORTHO05D010301 4.3e-15 85.5 171 40.4
Manes.03G008000 Manihot esculenta HOM05D008192 ORTHO05D010301 7.3e-15 84.7 147 40.1
EL10Ac2g02493 Beta vulgaris HOM05D008192 ORTHO05D010301 4.7e-14 82.0 158 34.2
FAN15G3555 Fragaria x ananassa HOM05D002088 ORTHO05D002204 6.2e-14 81.6 155 39.4
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 1.4e-13 80.5 180 36.7
FvH4_2g41181 Fragaria vesca HOM05D008192 ORTHO05D010301 1.8e-13 80.1 172 38.4
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 4.0e-13 79.0 181 34.8
GSVIVG01035976001 Vitis vinifera HOM05D008192 ORTHO05D010301 6.8e-13 78.2 171 38.6
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 1.2e-12 77.4 149 39.6
FAN20G1545 Fragaria x ananassa HOM05D008192 ORTHO05D010301 1.5e-12 77.0 155 38.7
CANSAT25G1276 Cannabis sativa HOM05D008192 ORTHO05D010301 3.4e-12 75.9 161 40.4
Actinidia22286 Actinidia chinensis HOM05D008192 ORTHO05D010301 4.4e-12 75.5 98 43.9
Migut.A00360 Erythranthe guttata HOM05D008192 ORTHO05D010301 7.5e-12 74.7 168 35.1
SalBow4G3126 Salvia bowleyana HOM05D008192 ORTHO05D010301 7.5e-12 74.7 169 36.7
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 9.9e-12 74.3 106 43.4
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 9.9e-12 74.3 106 43.4
Sc09g0010700 Simmondsia chinensis HOM05D008192 ORTHO05D010301 9.9e-12 74.3 156 36.5
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 1.3e-11 73.9 178 37.6
Manes.16G130300 Manihot esculenta HOM05D008192 ORTHO05D010301 2.2e-11 73.2 147 38.1
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 2.9e-11 72.8 95 48.4
Oeu021912.1 Olea europaea HOM05D008192 ORTHO05D010301 1.9e-10 70.1 162 35.8
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 4.1e-10 68.9 85 44.7
Sed0007247 Sechium edule HOM05D008192 ORTHO05D010301 1.2e-09 67.4 100 44.0
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 1.2e-09 67.4 85 49.4
PSO384G1085 Papaver somniferum HOM05D003759 ORTHO05D004149 2.1e-09 66.6 188 36.2
Nitab4.5_0010499g0010 Nicotiana tabacum HOM05D008192 ORTHO05D010301 4.6e-09 65.5 162 34.0
Hund25618 Selenicereus undatus HOM05D008192 ORTHO05D010301 4.6e-09 65.5 77 49.4
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 7.8e-09 64.7 85 43.5
FAN27G3331 Fragaria x ananassa HOM05D002088 ORTHO05D002204 1.0e-08 64.3 110 40.0
Oeu032512.1 Olea europaea HOM05D008192 ORTHO05D010301 1.0e-08 64.3 90 46.7
Sabra06G0207000 Salix brachista HOM05D008192 ORTHO05D010301 1.0e-08 64.3 169 34.9
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 1.3e-08 63.9 82 43.9
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 1.3e-08 63.9 94 42.6
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.7e-08 63.5 97 41.2
Potri.006G264900 Populus trichocarpa HOM05D008192 ORTHO05D010301 1.7e-08 63.5 74 52.7
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 3.0e-08 62.8 63 55.6
DCAR_014806 Daucus carota HOM05D003759 ORTHO05D004149 5.1e-08 62.0 131 35.1
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 5.1e-08 62.0 190 35.3
Nitab4.5_0000264g0200 Nicotiana tabacum HOM05D008192 ORTHO05D010301 6.6e-08 61.6 58 56.9
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 1.1e-07 60.8 105 35.2
SalBow1G6739 Salvia bowleyana HOM05D003759 ORTHO05D004149 1.5e-07 60.5 101 35.6
DCAR_022864 Daucus carota HOM05D008192 ORTHO05D010301 2.5e-07 59.7 68 50.0
Glyma.17G223700 Glycine max HOM05D008192 ORTHO05D010301 2.5e-07 59.7 164 34.8
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 2.5e-07 59.7 106 40.6
Actinidia01426 Actinidia chinensis HOM05D003759 ORTHO05D004149 3.3e-07 59.3 61 52.5
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 3.3e-07 59.3 74 47.3
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 4.3e-07 58.9 91 38.5
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 4.3e-07 58.9 187 29.4
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 4.3e-07 58.9 134 35.8
Sed0022175 Sechium edule HOM05D003759 ORTHO05D004149 4.3e-07 58.9 120 33.3
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 5.6e-07 58.5 84 41.7
COL.COLO4_18822 Corchorus olitorius HOM05D003759 ORTHO05D004149 5.6e-07 58.5 113 33.6
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 5.6e-07 58.5 69 49.3
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 5.6e-07 58.5 74 48.6
SGA_v2.0_scaffold147G36345 Striga asiatica HOM05D008192 ORTHO05D010301 5.6e-07 58.5 90 41.1
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 5.6e-07 58.5 87 41.4
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 7.3e-07 58.2 142 31.0
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 9.5e-07 57.8 100 36.0
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 1.2e-06 57.4 61 50.8
Solyc08g006760.4 Solanum lycopersicum HOM05D008192 ORTHO05D010301 1.2e-06 57.4 174 30.5
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 1.6e-06 57.0 98 35.7
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 2.1e-06 56.6 69 49.3
Migut.K00316 Erythranthe guttata HOM05D003759 ORTHO05D004149 2.1e-06 56.6 106 39.6
Peaxi162Scf00045g02027 Petunia axillaris HOM05D008192 ORTHO05D010301 2.1e-06 56.6 71 50.7
CDE02G3703 Ceratophyllum demersum HOM05D003759 ORTHO05D004149 2.8e-06 56.2 58 50.0
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 3.6e-06 55.8 79 41.8
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 3.6e-06 55.8 58 55.2
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 3.6e-06 55.8 89 41.6
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 4.7e-06 55.5 56 51.8
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 4.7e-06 55.5 79 45.6
Hund02985 Selenicereus undatus HOM05D008192 ORTHO05D010301 4.7e-06 55.5 175 33.1
Duzib150G1598 Durio zibethinus HOM05D003759 ORTHO05D004149 6.2e-06 55.1 87 36.8
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 6.2e-06 55.1 56 51.8
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 6.2e-06 55.1 56 51.8
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 6.2e-06 55.1 127 34.6
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 6.2e-06 55.1 125 34.4
THA.LOC104819991 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 6.2e-06 55.1 149 33.6
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 8.1e-06 54.7 56 48.2
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 8.1e-06 54.7 72 43.1


User provided reference genes

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