Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 1.1e-231 806.2 404 100.0
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 1.6e-230 802.4 404 99.5
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.4e-229 798.5 404 99.0
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 4.2e-202 708.0 404 88.4
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 6.5e-187 657.5 404 83.7
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 2.0e-175 619.4 399 79.2
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 2.8e-169 599.0 406 74.6
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 5.6e-162 574.7 413 71.9
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 1.1e-157 560.5 421 69.4
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 7.3e-154 547.7 395 70.4
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 4.7e-153 545.0 416 69.7
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 6.2e-153 544.7 414 69.3
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 8.9e-152 540.8 407 69.8
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 1.5e-151 540.0 392 70.9
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 2.6e-151 539.3 381 72.2
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 4.4e-151 538.5 414 68.8
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 5.8e-151 538.1 392 69.6
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 3.7e-150 535.4 410 69.3
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 3.7e-150 535.4 417 67.6
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 4.9e-150 535.0 420 67.1
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 8.3e-150 534.3 393 69.7
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 9.2e-149 530.8 390 70.5
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 9.2e-149 530.8 390 68.5
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 3.5e-148 528.9 412 68.2
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 1.0e-147 527.3 415 69.4
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 1.3e-147 526.9 392 68.6
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.3e-147 526.2 405 67.9
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 3.9e-147 525.4 413 68.5
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 6.6e-147 524.6 416 66.3
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 8.6e-147 524.2 416 66.3
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 4.3e-146 521.9 415 67.7
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 1.6e-145 520.0 395 68.4
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 1.8e-144 516.5 415 65.3
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 2.3e-144 516.2 416 64.4
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 5.2e-144 515.0 415 65.1
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 6.8e-144 514.6 415 64.8
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 8.9e-144 514.2 404 67.3
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 4.4e-143 511.9 400 66.2
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 4.4e-143 511.9 404 65.3
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.3e-142 510.4 400 65.0
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 2.2e-142 509.6 410 64.1
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 2.9e-142 509.2 410 64.1
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 7.1e-141 504.6 420 63.1
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 1.2e-140 503.8 404 64.1
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.2e-140 503.8 409 63.1
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 3.5e-140 502.3 368 68.5
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 1.7e-139 500.0 399 65.9
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 1.9e-138 496.5 404 62.6
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 7.3e-138 494.6 404 63.1
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 9.5e-138 494.2 390 65.4
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 9.5e-138 494.2 410 63.4
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 1.6e-137 493.4 404 63.9
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 8.9e-136 487.6 417 63.5
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 2.6e-135 486.1 414 64.3
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 9.9e-135 484.2 392 65.3
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 9.9e-135 484.2 403 63.3
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.2e-134 483.0 412 63.6
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.2e-134 483.0 412 63.6
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 2.9e-134 482.6 392 65.8
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 1.2e-132 477.2 412 63.3
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 3.0e-131 472.6 392 65.1
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.2e-129 467.2 389 62.7
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 1.2e-129 467.2 355 67.6
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 4.7e-129 465.3 415 58.8
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.8e-128 463.4 402 61.7
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 6.9e-128 461.5 392 60.7
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 2.0e-127 459.9 381 64.8
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 2.6e-127 459.5 389 63.0
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 3.4e-127 459.1 428 59.1
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 9.9e-127 457.6 389 62.5
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.2e-126 456.4 333 70.3
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.1e-125 454.1 436 57.8
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 2.4e-125 453.0 409 60.4
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 4.2e-125 452.2 362 64.4
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 1.7e-123 446.8 413 59.3
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 2.3e-123 446.4 396 58.8
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 1.1e-122 444.1 429 57.8
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 1.3e-121 440.7 311 73.0
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 1.6e-121 440.3 398 58.5
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 4.8e-121 438.7 386 59.3
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.0e-119 433.3 396 59.6
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 2.3e-115 419.9 428 52.8
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 5.6e-114 415.2 388 56.2
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 2.1e-113 413.3 460 51.5
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 1.1e-112 411.0 354 62.4
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 4.9e-110 402.1 409 54.0
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 6.0e-108 395.2 405 55.8
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 3.1e-104 382.9 363 57.9
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 5.3e-104 382.1 353 54.4
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.7e-98 362.1 327 61.5
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.9e-96 355.1 334 59.6
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-95 354.4 336 59.2
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.2e-94 350.1 295 64.7
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.2e-93 345.9 295 64.1
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.2e-93 345.9 295 64.1
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.2e-93 345.9 295 64.1
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 3.6e-92 342.8 464 42.9
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 1.4e-91 340.9 404 45.5
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 2.3e-91 340.1 280 66.4
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 2.3e-91 340.1 325 53.5
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 8.8e-91 338.2 359 53.2
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 2.4e-88 330.1 294 60.2
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 2.6e-87 326.6 420 44.5
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 2.0e-82 310.5 213 74.6
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 2.7e-76 290.0 267 57.7
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 1.8e-72 277.3 211 67.8
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 3.0e-67 260.0 231 61.0
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 5.2e-51 206.1 320 40.9
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.1e-32 145.2 176 44.9
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.2e-32 143.7 134 56.0
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.3e-30 138.3 85 74.1
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.4e-27 128.3 209 37.3
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.2e-23 115.2 174 42.0
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.3e-21 107.1 123 47.2
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-10 72.0 76 57.9
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-10 72.0 76 57.9
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-10 72.0 76 57.9
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 4.4e-10 70.1 47 72.3
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 4.4e-10 70.1 44 77.3
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 9.9e-10 68.9 60 66.7
TPR.G18971 Trifolium pratense HOM05D003263 ORTHO05D004801 5.1e-06 56.6 93 38.7


User provided reference genes

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