Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 3.8e-171 604.7 304 100.0
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 3.8e-171 604.7 304 100.0
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 4.3e-167 591.3 304 98.0
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 5.6e-159 564.3 304 91.8
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 7.4e-159 563.9 304 92.1
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 1.9e-154 549.3 304 89.8
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 7.7e-148 527.3 304 85.5
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 1.3e-147 526.6 307 86.3
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 4.2e-146 521.5 300 85.7
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 1.2e-145 520.0 301 86.0
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.6e-145 519.6 299 85.3
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 7.9e-145 517.3 299 84.9
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 7.9e-145 517.3 301 84.4
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 1.0e-144 516.9 301 84.1
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 3.9e-144 515.0 301 84.4
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 5.1e-144 514.6 301 83.7
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.1e-143 513.5 299 84.3
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.0e-143 512.7 299 84.3
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 2.0e-143 512.7 299 84.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.5e-143 512.3 299 84.3
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 6.3e-142 507.7 301 82.4
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 6.3e-142 507.7 301 82.4
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 8.2e-142 507.3 300 82.7
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 2.4e-141 505.8 301 82.1
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 2.4e-141 505.8 301 82.1
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 2.4e-141 505.8 301 81.7
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 3.1e-141 505.4 301 82.7
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 6.9e-141 504.2 301 83.4
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 9.1e-141 503.8 301 83.1
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.5e-140 503.1 301 82.7
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.5e-140 503.1 301 82.7
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 1.7e-139 499.6 301 81.7
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 1.7e-139 499.6 299 82.3
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 1.7e-139 499.6 301 81.7
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 6.5e-139 497.7 301 82.7
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.1e-138 496.9 301 81.4
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 1.4e-138 496.5 301 80.7
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 1.4e-138 496.5 301 80.1
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 3.2e-138 495.4 301 80.4
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 3.2e-138 495.4 302 79.8
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 4.2e-138 495.0 300 82.3
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 2.7e-137 492.3 301 81.7
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 3.0e-136 488.8 301 80.1
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 3.0e-136 488.8 301 80.7
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.1e-135 486.9 300 79.3
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.3e-134 483.4 301 80.4
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 3.7e-134 481.9 299 78.9
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 6.3e-134 481.1 301 78.1
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 6.3e-134 481.1 301 78.4
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 1.1e-133 480.3 301 78.1
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.8e-133 479.6 301 79.7
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 2.4e-133 479.2 305 78.0
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 7.0e-133 477.6 300 79.7
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 7.0e-133 477.6 301 76.4
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 9.1e-133 477.2 301 78.1
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 2.0e-132 476.1 300 78.0
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 5.5e-130 468.0 303 76.6
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 7.2e-130 467.6 292 77.1
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.6e-129 466.5 302 74.2
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 2.3e-128 462.6 303 77.2
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 3.0e-128 462.2 303 76.2
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 2.6e-127 459.1 293 78.2
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 4.4e-127 458.4 304 77.0
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 5.7e-127 458.0 303 76.9
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 7.4e-127 457.6 300 74.3
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 9.7e-127 457.2 304 77.0
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 1.7e-126 456.4 303 77.2
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 3.7e-126 455.3 301 75.1
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 8.2e-126 454.1 301 73.4
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 2.4e-125 452.6 300 72.3
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 5.3e-125 451.4 302 73.5
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 1.2e-124 450.3 300 73.3
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 2.6e-124 449.1 300 73.0
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 2.6e-124 449.1 300 72.7
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 3.5e-124 448.7 300 73.3
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 3.5e-124 448.7 300 73.3
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 1.3e-123 446.8 300 72.7
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 1.3e-123 446.8 311 73.0
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 2.2e-123 446.0 300 73.0
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 2.9e-123 445.7 300 71.0
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 3.8e-123 445.3 300 72.3
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 2.5e-122 442.6 300 72.3
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 3.2e-122 442.2 287 76.7
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 3.2e-122 442.2 300 71.7
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 5.5e-122 441.4 300 72.0
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.2e-121 440.3 300 71.0
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 2.1e-121 439.5 300 70.7
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 2.1e-121 439.5 300 70.7
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 2.1e-121 439.5 300 70.7
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 3.6e-121 438.7 304 71.1
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 4.7e-121 438.3 275 80.0
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 4.0e-120 435.3 300 72.0
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 6.3e-118 427.9 300 71.3
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 1.8e-117 426.4 304 69.7
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.1e-114 417.2 300 69.0
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 8.0e-113 411.0 249 80.3
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 1.8e-112 409.8 239 85.4
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 8.3e-110 401.0 249 77.9
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 8.0e-105 384.4 300 64.7
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 9.8e-103 377.5 299 64.5
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 1.4e-101 373.6 227 80.2
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 2.4e-101 372.9 213 82.6
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 4.1e-101 372.1 305 61.6
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.3e-99 366.3 230 77.4
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.9e-99 365.9 259 70.7
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 8.6e-99 364.4 248 72.2
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 8.9e-96 354.4 219 80.4
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.4e-95 352.4 218 76.6
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.7e-94 349.0 222 74.3
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 1.1e-93 347.4 254 66.9
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 3.5e-92 342.4 277 61.4
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 1.2e-84 317.4 302 58.3
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 1.5e-82 310.5 343 49.9
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 7.8e-76 288.1 173 78.0
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 4.6e-60 235.7 316 42.4
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 1.4e-48 197.6 140 71.4
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 7.6e-47 191.8 163 59.5
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 3.2e-45 186.4 343 36.7
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 3.0e-43 179.9 301 40.9
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.8e-40 170.6 112 75.9
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 2.0e-39 167.2 175 50.3
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.3e-33 147.9 91 72.5
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 2.5e-29 133.7 89 71.9
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 5.7e-26 122.5 91 68.1
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 5.7e-26 122.5 86 75.6
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 9.7e-26 121.7 86 67.4
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 1.3e-25 121.3 352 29.8
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 5.0e-22 109.4 135 48.9
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 4.7e-20 102.8 64 82.8
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 4.8e-17 92.8 53 73.6
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 2.1e-12 77.4 44 79.5


User provided reference genes

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