Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.004G088500 Gossypium raimondii HOM05D006976 ORTHO05D008761 4.4e-33 144.1 73 100.0
Gohir.D01G101878 Gossypium hirsutum HOM05D006976 ORTHO05D008761 4.1e-23 110.9 93 66.7
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.7e-21 105.5 93 63.4
GSVIVG01030620001 Vitis vinifera HOM05D006976 ORTHO05D008761 3.8e-21 104.4 93 62.4
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 5.0e-21 104.0 93 62.4
TAR633G2101 Trochodendron aralioides HOM05D006976 ORTHO05D008761 1.5e-20 102.4 93 60.2
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-20 101.3 93 60.2
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 4.2e-20 100.9 93 60.2
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 4.2e-20 100.9 93 60.2
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 4.2e-20 100.9 93 60.2
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 4.2e-20 100.9 93 60.2
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 4.2e-20 100.9 93 60.2
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 4.2e-20 100.9 93 60.2
HanXRQChr13g0421821 Helianthus annuus HOM05D006976 ORTHO05D008761 4.2e-20 100.9 93 60.2
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 4.2e-20 100.9 93 60.2
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 4.2e-20 100.9 93 60.2
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 4.2e-20 100.9 93 60.2
Hma1.2p1_1409F.1_g281660 Hydrangea macrophylla HOM05D006976 ORTHO05D008761 9.5e-20 99.8 93 60.2
Gohir.A01G204050 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.2e-19 99.4 85 65.9
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 1.2e-19 99.4 93 58.1
HanXRQChr11g0345161 Helianthus annuus HOM05D006976 ORTHO05D008761 2.1e-19 98.6 93 59.1
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 3.6e-19 97.8 93 59.1
Hund29806 Selenicereus undatus HOM05D000806 ORTHO05D002324 3.6e-19 97.8 93 58.1
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 6.1e-19 97.1 93 57.0
PGR111G0047 Punica granatum HOM05D006976 ORTHO05D008761 1.0e-18 96.3 92 60.9
Hund07993 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.4e-18 95.9 93 57.0
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 2.3e-18 95.1 93 54.8
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 2.3e-18 95.1 93 54.8
BolSC35t60647H Brassica oleracea HOM05D006976 ORTHO05D008761 2.3e-18 95.1 93 54.8
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 2.3e-18 95.1 93 54.8
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 2.3e-18 95.1 93 54.8
BolSC49t61182H Brassica oleracea HOM05D006976 ORTHO05D008761 2.3e-18 95.1 93 54.8
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 2.3e-18 95.1 93 54.8
BraSC59t46590Z Brassica rapa HOM05D006976 ORTHO05D008761 2.3e-18 95.1 93 54.8
CARHR282110 Cardamine hirsuta HOM05D006976 ORTHO05D008761 3.0e-18 94.7 93 54.8
Lj1P303T18 Lonicera japonica HOM05D006976 ORTHO05D008761 6.8e-18 93.6 93 57.0
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 8.9e-18 93.2 93 54.8
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 1.2e-17 92.8 93 53.8
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 1.5e-17 92.4 93 53.8
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 2.0e-17 92.0 93 54.8
GSVIVG01029875001 Vitis vinifera HOM05D006976 ORTHO05D008761 3.4e-17 91.3 93 58.1
Oeu028777.1 Olea europaea HOM05D000806 ORTHO05D002324 1.7e-16 89.0 93 52.7
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 3.7e-16 87.8 93 52.7
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 6.3e-16 87.0 94 52.1
Gohir.A09G041060 Gossypium hirsutum HOM05D006976 ORTHO05D008761 8.3e-16 86.7 51 86.3
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.4e-15 85.9 80 58.8
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 1.4e-15 85.9 93 51.6
Solyc00g500020.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 1.8e-15 85.5 93 51.6
Solyc00g500067.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 1.8e-15 85.5 93 51.6
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 2.4e-15 85.1 91 52.7
CAN.G232.11 Capsicum annuum HOM05D006976 ORTHO05D008761 7.0e-15 83.6 93 51.6
RcHm_v2.0_CPg0502081 Rosa chinensis HOM05D006976 ORTHO05D008761 7.0e-15 83.6 92 52.2
Medtr5g019520 Medicago truncatula HOM05D006976 ORTHO05D008761 9.2e-15 83.2 93 51.6
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 1.2e-14 82.8 82 54.9
Potri.016G094100 Populus trichocarpa HOM05D006976 ORTHO05D008761 1.2e-14 82.8 49 83.7
Phvul.002G278108 Phaseolus vulgaris HOM05D006976 ORTHO05D008761 3.5e-14 81.3 91 53.8
Potri.013G162300 Populus trichocarpa HOM05D006976 ORTHO05D008761 3.5e-14 81.3 49 81.6
GSVIVG01017636001 Vitis vinifera HOM05D006976 ORTHO05D008761 3.5e-14 81.3 72 63.9
Hund28750 Selenicereus undatus HOM05D006976 ORTHO05D008761 5.9e-14 80.5 84 53.6
Gorai.001G104700 Gossypium raimondii HOM05D006976 ORTHO05D008761 7.8e-14 80.1 79 60.8
CAN.G16.7 Capsicum annuum HOM05D006976 ORTHO05D008761 5.0e-13 77.4 91 48.4
Peaxi162Scf00021g00087 Petunia axillaris HOM05D000806 ORTHO05D002324 6.6e-13 77.0 82 52.4
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 1.1e-12 76.3 93 49.5
Gohir.D07G097266 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.1e-12 76.3 51 78.4
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 1.5e-12 75.9 51 70.6
HPP92_028424 Vanilla planifolia HOM05D006976 ORTHO05D008761 1.9e-12 75.5 93 45.2
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 3.3e-12 74.7 91 47.3
Sc03g0010000 Simmondsia chinensis HOM05D006976 ORTHO05D008761 4.3e-12 74.3 77 55.8
HanXRQChr08g0209641 Helianthus annuus HOM05D006976 ORTHO05D008761 1.2e-11 72.8 76 55.3
HPP92_022279 Vanilla planifolia HOM05D006976 ORTHO05D008761 4.7e-11 70.9 93 43.0
Oeu039082.1 Olea europaea HOM05D006976 ORTHO05D008761 2.3e-10 68.6 84 48.8
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 3.1e-10 68.2 52 65.4
Psat0s2288g0200 Pisum sativum HOM05D006976 ORTHO05D008761 8.9e-10 66.6 47 70.2
Psat0s2754g0120 Pisum sativum HOM05D000806 ORTHO05D002324 8.9e-10 66.6 47 70.2
EL10Ac4g09265 Beta vulgaris HOM05D006976 ORTHO05D008761 1.5e-09 65.9 42 73.8
Gohir.D02G130401 Gossypium hirsutum HOM05D006976 ORTHO05D008761 4.9e-08 60.8 40 80.0
Peaxi162Scf00413g00828 Petunia axillaris HOM05D000806 ORTHO05D002324 4.9e-08 60.8 43 67.4
Gorai.005G146300 Gossypium raimondii HOM05D006976 ORTHO05D008761 6.4e-08 60.5 40 80.0
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 9.2e-07 56.6 40 67.5


User provided reference genes

Program Settings