Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D08G035150 Gossypium hirsutum HOM05D001200 ORTHO05D002731 3.2e-50 201.4 102 100.0
Gorai.004G033100 Gossypium raimondii HOM05D001200 ORTHO05D002731 3.2e-50 201.4 102 100.0
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.3e-32 142.1 95 78.9
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 6.8e-32 140.6 95 77.9
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 3.7e-30 134.8 95 72.6
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 3.7e-30 134.8 95 72.6
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 3.7e-30 134.8 95 72.6
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 3.7e-30 134.8 95 72.6
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 4.8e-30 134.4 95 72.6
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 4.8e-30 134.4 95 74.7
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 6.3e-30 134.0 95 72.6
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 6.3e-30 134.0 95 72.6
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 6.3e-30 134.0 95 72.6
Ciclev10010880m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.3e-30 133.7 95 72.6
Ciclev10013970m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.3e-30 133.7 95 72.6
Ciclev10013975m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.3e-30 133.7 95 72.6
Ciclev10027651m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.3e-30 133.7 95 72.6
Ciclev10030458m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.3e-30 133.7 95 72.6
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 1.4e-29 132.9 95 71.6
HanXRQChr00c0328g0573611 Helianthus annuus HOM05D001200 ORTHO05D002731 4.1e-29 131.3 97 71.1
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 9.1e-29 130.2 95 71.6
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 9.1e-29 130.2 95 71.6
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 1.2e-28 129.8 95 70.5
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 2.0e-28 129.0 95 70.5
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 2.7e-28 128.6 95 69.5
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 4.5e-28 127.9 95 68.4
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 5.9e-28 127.5 95 70.5
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 5.9e-28 127.5 95 68.4
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 5.9e-28 127.5 95 68.4
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 7.7e-28 127.1 95 68.4
BolSC35t60694H Brassica oleracea HOM05D001200 ORTHO05D002731 7.7e-28 127.1 95 68.4
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 7.7e-28 127.1 95 68.4
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 7.7e-28 127.1 95 68.4
BolSC47t61066H Brassica oleracea HOM05D001200 ORTHO05D002731 7.7e-28 127.1 95 68.4
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 7.7e-28 127.1 95 68.4
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 7.7e-28 127.1 95 68.4
BolC2t08908H Brassica oleracea HOM05D001200 ORTHO05D002731 1.3e-27 126.3 95 67.4
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-27 125.9 96 69.8
Gohir.A01G139671 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.9e-26 122.5 95 71.6
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 4.2e-26 121.3 93 67.7
Ciclev10027632m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.6e-25 118.2 90 71.1
BraSC59t46528Z Brassica rapa HOM05D001200 ORTHO05D002731 4.0e-24 114.8 99 63.6
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 1.2e-23 113.2 81 70.4
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 7.5e-23 110.5 78 74.4
Solyc11g021215.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 3.7e-22 108.2 99 59.6
Gohir.D03G063001 Gossypium hirsutum HOM05D001200 ORTHO05D002731 4.9e-22 107.8 78 70.5
TPR.G24771 Trifolium pratense HOM05D001200 ORTHO05D002731 1.1e-21 106.7 78 66.7
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 2.4e-21 105.5 78 69.2
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 5.4e-21 104.4 95 62.1
Gorai.013G108500 Gossypium raimondii HOM05D001200 ORTHO05D002731 1.6e-20 102.8 83 65.1
Medtr7g075220 Medicago truncatula HOM05D000504 ORTHO05D002731 2.0e-20 102.4 95 60.0
GSVIVG01023768001 Vitis vinifera HOM05D001200 ORTHO05D002731 3.5e-20 101.7 96 59.4
BraSC103t45427Z Brassica rapa HOM05D001200 ORTHO05D002731 7.8e-20 100.5 81 63.0
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 1.0e-19 100.1 96 59.4
HanXRQChr00c0703g0576951 Helianthus annuus HOM05D001200 ORTHO05D002731 1.2e-17 93.2 99 59.6
Solyc11g044647.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 2.1e-17 92.4 78 62.8
Thhalv10017742m.g Eutrema salsugineum HOM05D001200 ORTHO05D002731 1.8e-16 89.4 95 54.7
HanXRQChr08g0211971 Helianthus annuus HOM05D001200 ORTHO05D002731 1.5e-15 86.3 55 76.4
CsaV3_UNG210140 Cucumis sativus L. HOM05D001200 ORTHO05D002731 2.6e-15 85.5 55 76.4
Lalb_Chr13g0292801 Lupinus albus HOM05D001200 ORTHO05D002731 2.6e-15 85.5 60 68.3
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 2.6e-15 85.5 78 51.3
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 5.8e-15 84.3 55 74.5
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 5.8e-15 84.3 55 74.5
BolSC29t60544H Brassica oleracea HOM05D001200 ORTHO05D002731 9.8e-15 83.6 96 49.0
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 1.3e-14 83.2 62 66.1
MBI10_g47593_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 1.3e-14 83.2 62 66.1
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 1.7e-14 82.8 55 74.5
HanXRQChr12g0383551 Helianthus annuus HOM05D001200 ORTHO05D002731 4.9e-14 81.3 55 72.7
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 4.9e-14 81.3 55 72.7
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 6.4e-14 80.9 61 65.6
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 8.3e-14 80.5 53 79.2
Hund30513 Selenicereus undatus HOM05D001200 ORTHO05D002731 8.3e-14 80.5 62 67.7
DCAR_025284 Daucus carota HOM05D001200 ORTHO05D002731 3.2e-13 78.6 55 70.9
Lsat_1_v5_gn_6_54081 Lactuca sativa HOM05D001200 ORTHO05D002731 4.1e-13 78.2 80 56.2
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 2.3e-11 72.4 95 48.4
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 2.3e-11 72.4 95 48.4
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 6.6e-11 70.9 47 72.3
SMO086G0020 Selaginella moellendorffii HOM05D001200 ORTHO05D002731 3.3e-10 68.6 94 43.6
TPR.G7852 Trifolium pratense HOM05D001200 ORTHO05D002731 6.2e-09 64.3 39 74.4
BraSC143t45662Z Brassica rapa HOM05D001200 ORTHO05D002731 1.8e-08 62.8 81 45.7
GSVIVG01016016001 Vitis vinifera HOM05D001200 ORTHO05D049435 5.2e-08 61.2 44 65.9
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 8.9e-08 60.5 97 44.3
Nitab4.5_0010611g0010 Nicotiana tabacum HOM05D001200 ORTHO05D002731 3.4e-07 58.5 74 47.3


User provided reference genes

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