Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D12G145725 Gossypium hirsutum HOM05D000902 ORTHO05D013400 2.2e-109 399.1 210 100.0
Gohir.D12G145575 Gossypium hirsutum HOM05D000902 ORTHO05D013400 1.3e-50 203.8 115 98.3
Gohir.D12G145650 Gossypium hirsutum HOM05D000902 ORTHO05D000832 6.0e-43 178.3 86 100.0
Gorai.008G157100 Gossypium raimondii HOM05D000902 ORTHO05D000832 6.0e-43 178.3 86 100.0
Gohir.A12G140950 Gossypium hirsutum HOM05D000902 ORTHO05D000832 3.0e-42 176.0 86 98.8
Duzib251G0606 Durio zibethinus HOM05D000902 ORTHO05D000832 4.0e-39 165.6 213 52.6
Gorai.008G157000 Gossypium raimondii HOM05D000902 ORTHO05D013400 1.3e-34 150.6 85 97.6
Gohir.A12G140900 Gossypium hirsutum HOM05D000902 ORTHO05D013400 9.6e-33 144.4 85 92.9
COL.COLO4_13698 Corchorus olitorius HOM05D000902 ORTHO05D000832 3.1e-23 112.8 217 43.8
COL.COLO4_24049 Corchorus olitorius HOM05D000902 ORTHO05D013400 3.8e-21 105.9 187 43.9
Ciclev10030712m.g Citrus clementina HOM05D000902 ORTHO05D000832 4.1e-15 85.9 147 41.5
CANSAT80G0625 Cannabis sativa HOM05D000902 ORTHO05D000832 2.0e-14 83.6 176 36.9
PSO478G4515 Papaver somniferum HOM05D000902 ORTHO05D000832 2.5e-12 76.6 118 41.5
Atru.chr6.1870 Acer truncatum HOM05D000902 ORTHO05D000832 5.5e-12 75.5 146 34.9
CiPaw.05G105600 Carya illinoinensis HOM05D000902 ORTHO05D000832 1.2e-11 74.3 120 42.5
RcHm_v2.0_Chr7g0189451 Rosa chinensis HOM05D000902 ORTHO05D000832 1.2e-11 74.3 167 34.1
PSO017G5166 Papaver somniferum HOM05D000902 ORTHO05D000832 1.6e-11 73.9 118 39.8
vmacro01040 Vaccinium macrocarpon HOM05D000902 ORTHO05D000832 2.1e-11 73.6 101 48.5
CSS0007487 Camellia sinensis var. sinensis HOM05D000902 ORTHO05D000832 2.7e-11 73.2 134 39.6
Duzib205G1670 Durio zibethinus HOM05D000902 ORTHO05D000832 2.7e-11 73.2 147 40.1
Lsat_1_v5_gn_5_10920 Lactuca sativa HOM05D000902 ORTHO05D000832 2.7e-11 73.2 132 37.9
PSO017G1274 Papaver somniferum HOM05D000902 ORTHO05D000832 2.7e-11 73.2 118 39.8
TWI18G0596 Tripterygium wilfordii HOM05D000902 ORTHO05D000832 2.7e-11 73.2 146 39.7
Lj3C1074T6 Lonicera japonica HOM05D000902 ORTHO05D000832 3.6e-11 72.8 111 45.0
Gohir.D12G194050 Gossypium hirsutum HOM05D000902 ORTHO05D000832 4.7e-11 72.4 112 42.9
Manes.14G048300 Manihot esculenta HOM05D000902 ORTHO05D000832 4.7e-11 72.4 140 40.7
PGR044G2719 Punica granatum HOM05D000902 ORTHO05D000832 4.7e-11 72.4 98 48.0
Cpa.g.sc4.155 Carica papaya HOM05D000902 ORTHO05D000832 6.1e-11 72.0 107 45.8
Prupe.1G221200 Prunus persica HOM05D000902 ORTHO05D000832 6.1e-11 72.0 162 38.9
QL10p001889 Quercus lobata HOM05D000902 ORTHO05D000832 6.1e-11 72.0 152 38.2
Ca_17571_v3 Cicer arietinum L. HOM05D000902 ORTHO05D000832 7.9e-11 71.6 193 30.6
ECA246G0932 Erigeron canadensis HOM05D000902 ORTHO05D000832 7.9e-11 71.6 134 38.1
arahy.Tifrunner.gnm1.ann1.LR2QKH Arachis hypogaea HOM05D000902 ORTHO05D000832 1.0e-10 71.2 127 42.5
EL10Ac6g13553 Beta vulgaris HOM05D000902 ORTHO05D000832 1.0e-10 71.2 161 35.4
TAR629G3413 Trochodendron aralioides HOM05D000902 ORTHO05D000832 1.0e-10 71.2 113 44.2
GSVIVG01008587001 Vitis vinifera HOM05D000902 ORTHO05D000832 1.4e-10 70.9 145 37.9
Gohir.A12G191700 Gossypium hirsutum HOM05D000902 ORTHO05D000832 1.8e-10 70.5 143 39.2
TAR371G0242 Trochodendron aralioides HOM05D000902 ORTHO05D000832 1.8e-10 70.5 102 46.1
CSS0044547 Camellia sinensis var. sinensis HOM05D000902 ORTHO05D000832 2.3e-10 70.1 226 31.0
MELO3C026187.2 Cucumis melo HOM05D000902 ORTHO05D000832 2.3e-10 70.1 107 47.7
arahy.Tifrunner.gnm1.ann1.Q161UF Arachis hypogaea HOM05D000902 ORTHO05D000832 3.0e-10 69.7 104 46.2
Potri.015G100900 Populus trichocarpa HOM05D000902 ORTHO05D000832 3.0e-10 69.7 144 34.0
Aqoxy5G03251 Aquilegia oxysepala HOM05D000902 ORTHO05D000832 3.9e-10 69.3 115 41.7
Lj4g0027865 Lotus japonicus HOM05D000902 ORTHO05D000832 3.9e-10 69.3 104 45.2
Eucgr.K02700 Eucalyptus grandis HOM05D000902 ORTHO05D000832 5.1e-10 68.9 198 32.3
DCAR_013057 Daucus carota HOM05D000902 ORTHO05D000832 8.8e-10 68.2 145 40.0
Medtr8g096410 Medicago truncatula HOM05D000902 ORTHO05D000832 8.8e-10 68.2 212 32.1
Sabra15G0121300 Salix brachista HOM05D000902 ORTHO05D000832 8.8e-10 68.2 141 38.3
Sed0001603 Sechium edule HOM05D000902 ORTHO05D000832 8.8e-10 68.2 140 37.9
Dinv11201 Davidia involucrata HOM05D000902 ORTHO05D000832 1.1e-09 67.8 160 35.6
Migut.I00561 Erythranthe guttata HOM05D000902 ORTHO05D000832 1.1e-09 67.8 104 42.3
Nn4g22232 Nelumbo nucifera HOM05D000902 ORTHO05D000832 1.1e-09 67.8 94 44.7
Prupe.5G147000 Prunus persica HOM05D000902 ORTHO05D000832 1.1e-09 67.8 126 39.7
QL03p051148 Quercus lobata HOM05D000902 ORTHO05D000832 1.1e-09 67.8 191 33.0
Glyma.08G010300 Glycine max HOM05D000902 ORTHO05D000832 2.6e-09 66.6 137 36.5
Nn3g16371 Nelumbo nucifera HOM05D000902 ORTHO05D000832 2.6e-09 66.6 198 33.8
Actinidia08888 Actinidia chinensis HOM05D000902 ORTHO05D000832 3.3e-09 66.2 146 39.0
Cc04_g09610 Coffea canephora HOM05D000902 ORTHO05D000832 3.3e-09 66.2 103 44.7
CsaV3_1G000340 Cucumis sativus L. HOM05D000902 ORTHO05D000832 3.3e-09 66.2 107 45.8
ECA247G2079 Erigeron canadensis HOM05D000902 ORTHO05D000832 4.4e-09 65.9 172 34.3
Gorai.008G208700 Gossypium raimondii HOM05D000902 ORTHO05D000832 4.4e-09 65.9 118 40.7
AUR62028886 Chenopodium quinoa HOM05D000902 ORTHO05D000832 5.7e-09 65.5 189 31.7
Lj5C92G16 Lonicera japonica HOM05D000902 ORTHO05D013400 5.7e-09 65.5 149 36.9
MBI11_g13057_MAGBIO Magnolia biondii HOM05D000902 ORTHO05D000832 5.7e-09 65.5 136 39.7
TWI14G0729 Tripterygium wilfordii HOM05D000902 ORTHO05D000832 9.7e-09 64.7 117 40.2
Gohir.D07G052900 Gossypium hirsutum HOM05D000902 ORTHO05D000832 1.7e-08 63.9 147 35.4
Phvul.002G284600 Phaseolus vulgaris HOM05D000902 ORTHO05D000832 1.7e-08 63.9 203 28.1
Gorai.001G055900 Gossypium raimondii HOM05D000902 ORTHO05D000832 2.2e-08 63.5 141 35.5
Gohir.A07G048600 Gossypium hirsutum HOM05D000902 ORTHO05D000832 2.8e-08 63.2 103 41.7
Lalb_Chr13g0297161 Lupinus albus HOM05D000902 ORTHO05D000832 2.8e-08 63.2 153 35.3
Actinidia30615 Actinidia chinensis HOM05D000902 ORTHO05D000832 3.7e-08 62.8 202 30.2
EL10Ac5g11361 Beta vulgaris HOM05D000902 ORTHO05D000832 4.8e-08 62.4 81 44.4
TPR.G559 Trifolium pratense HOM05D000902 ORTHO05D013400 4.8e-08 62.4 101 40.6
AUR62038832 Chenopodium quinoa HOM05D000902 ORTHO05D000832 6.3e-08 62.0 81 48.1
Haze_12461 Corylus avellana HOM05D000902 ORTHO05D000832 6.3e-08 62.0 144 36.8
Eucgr.B03533 Eucalyptus grandis HOM05D000902 ORTHO05D000832 6.3e-08 62.0 218 31.7
MD14G1151900 Malus domestica HOM05D000902 ORTHO05D000832 6.3e-08 62.0 192 33.9
Psat7g037320 Pisum sativum HOM05D000902 ORTHO05D000832 8.2e-08 61.6 216 31.0
VMungo0251G1748 Vigna mungo HOM05D000902 ORTHO05D000832 8.2e-08 61.6 142 35.2
FAN04G2273 Fragaria x ananassa HOM05D000902 ORTHO05D000832 1.1e-07 61.2 146 32.2
unitig_26.g9288 Utricularia gibba HOM05D000396 ORTHO05D001816 1.1e-07 61.2 141 39.0
FvH4_5g08810 Fragaria vesca HOM05D000902 ORTHO05D000832 1.4e-07 60.8 146 32.2
SGA_v2.0_scaffold188G40336 Striga asiatica HOM05D000902 ORTHO05D000832 1.4e-07 60.8 102 42.2
SalBow5G4873 Salvia bowleyana HOM05D000902 ORTHO05D000832 1.8e-07 60.5 162 33.3
Cfa018751 Carpinus fangiana HOM05D000902 ORTHO05D000832 2.4e-07 60.1 121 37.2
FAN13G2951 Fragaria x ananassa HOM05D000902 ORTHO05D000832 2.4e-07 60.1 146 31.5
Thecc.03G134800 Theobroma cacao HOM05D000902 ORTHO05D000832 2.4e-07 60.1 98 44.9
MBI07_g24742_MAGBIO Magnolia biondii HOM05D000902 ORTHO05D000832 3.1e-07 59.7 129 37.2
HanXRQChr10g0310741 Helianthus annuus HOM05D000902 ORTHO05D000832 4.1e-07 59.3 104 38.5
Rhsim08G0193200 Rhododendron simsii HOM05D000902 ORTHO05D000832 4.1e-07 59.3 98 42.9
CDE05G3380 Ceratophyllum demersum HOM05D000902 ORTHO05D013400 5.3e-07 58.9 102 41.2
FAN18G1525 Fragaria x ananassa HOM05D000902 ORTHO05D000832 5.3e-07 58.9 146 31.5
MD13G1123700 Malus domestica HOM05D000902 ORTHO05D000832 5.3e-07 58.9 193 32.6
Hund10108 Selenicereus undatus HOM05D000902 ORTHO05D000832 5.3e-07 58.9 176 32.4
CARHR232370 Cardamine hirsuta HOM05D000902 ORTHO05D000832 7.0e-07 58.5 73 52.1
AL7G28220 Arabidopsis lyrata HOM05D000902 ORTHO05D000832 9.1e-07 58.2 77 46.8
AUR62029563 Chenopodium quinoa HOM05D000902 ORTHO05D000832 9.1e-07 58.2 81 45.7
Dinv23182 Davidia involucrata HOM05D000902 ORTHO05D000832 9.1e-07 58.2 101 41.6
AL8G24940 Arabidopsis lyrata HOM05D000902 ORTHO05D000832 1.5e-06 57.4 93 44.1
AUR62005667 Chenopodium quinoa HOM05D000902 ORTHO05D000832 1.5e-06 57.4 189 30.2
Haze_07183 Corylus avellana HOM05D000902 ORTHO05D000832 1.5e-06 57.4 121 35.5
Oeu048892.2 Olea europaea HOM05D000902 ORTHO05D013400 1.5e-06 57.4 138 34.1
BolC3t14334H Brassica oleracea HOM05D000902 ORTHO05D000832 2.0e-06 57.0 191 31.9
FvH4_4g23220 Fragaria vesca HOM05D000902 ORTHO05D000832 2.0e-06 57.0 180 32.2
HanXRQChr08g0236501 Helianthus annuus HOM05D000902 ORTHO05D000832 2.0e-06 57.0 183 31.1
Zm00001eb086500 Zea mays HOM05D000902 ORTHO05D000832 2.0e-06 57.0 115 37.4
Sp7g22960 Schrenkiella parvula HOM05D000902 ORTHO05D000832 2.6e-06 56.6 73 49.3
BcaNung03989 Brassica carinata HOM05D000902 ORTHO05D000832 3.5e-06 56.2 78 48.7
Carub.0007s1608 Capsella rubella HOM05D000902 ORTHO05D000832 3.5e-06 56.2 73 49.3
Cfa009402 Carpinus fangiana HOM05D000902 ORTHO05D000832 3.5e-06 56.2 144 36.1
FAN07G0834 Fragaria x ananassa HOM05D000902 ORTHO05D000832 3.5e-06 56.2 180 31.7
AT4G24970 Arabidopsis thaliana HOM05D000902 ORTHO05D000832 4.5e-06 55.8 73 47.9
Hma1.2p1_0275F.1_g110510 Hydrangea macrophylla HOM05D000902 ORTHO05D000832 4.5e-06 55.8 120 37.5
Rhsim12G0022900 Rhododendron simsii HOM05D000902 ORTHO05D000832 4.5e-06 55.8 150 34.0
Atru.chr12.2337 Acer truncatum HOM05D000902 ORTHO05D000832 5.9e-06 55.5 136 30.1
Lsat_1_v5_gn_4_2120 Lactuca sativa HOM05D000902 ORTHO05D000832 5.9e-06 55.5 105 39.0
Aa31LG7G10770 Aethionema arabicum HOM05D000902 ORTHO05D000832 7.7e-06 55.1 130 35.4
Hund02463 Selenicereus undatus HOM05D000902 ORTHO05D000832 7.7e-06 55.1 130 34.6


User provided reference genes

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