Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.2e-285 985.7 482 100.0
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 1.5e-283 978.8 482 99.4
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 3.8e-274 947.6 482 96.3
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 5.8e-251 870.5 483 86.7
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 5.7e-246 854.0 481 85.7
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 4.3e-238 827.8 476 84.2
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 3.3e-230 801.6 454 85.0
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 2.7e-203 712.2 492 71.5
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 1.2e-200 703.4 497 69.6
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 4.0e-199 698.4 501 70.3
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 6.8e-199 697.6 497 69.4
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 9.8e-198 693.7 501 69.7
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 2.8e-197 692.2 491 69.2
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 3.7e-197 691.8 496 70.0
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 7.0e-196 687.6 474 70.9
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 1.6e-195 686.4 474 70.7
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 2.0e-195 686.0 485 70.5
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 3.5e-195 685.3 489 69.1
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.1e-193 680.2 495 67.5
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 1.8e-191 672.9 493 68.2
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 6.8e-191 671.0 498 66.3
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 3.4e-190 668.7 484 67.4
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 7.5e-190 667.5 484 68.4
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 9.8e-190 667.2 484 68.2
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 9.8e-190 667.2 483 68.9
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 8.3e-189 664.1 486 67.1
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 3.2e-188 662.1 475 68.8
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 9.2e-188 660.6 470 69.8
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 2.0e-187 659.4 496 65.7
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 2.5e-185 652.5 486 66.7
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 2.5e-185 652.5 534 64.0
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 8.0e-184 647.5 497 65.8
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 2.3e-183 646.0 490 66.1
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 7.5e-182 641.0 476 67.0
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 2.2e-181 639.4 501 64.7
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 3.7e-181 638.6 523 62.9
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 1.4e-180 636.7 486 65.0
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 3.2e-180 635.6 493 65.3
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 1.0e-178 630.6 480 65.8
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 2.3e-178 629.4 470 63.4
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 2.5e-177 625.9 514 63.0
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 8.1e-176 620.9 487 64.3
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.4e-175 620.2 498 64.7
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 3.1e-175 619.0 478 65.1
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.7e-173 613.2 430 69.5
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 2.9e-173 612.5 483 64.4
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 3.7e-173 612.1 480 64.0
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 4.9e-173 611.7 474 64.6
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 4.9e-173 611.7 483 64.0
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 4.9e-173 611.7 476 62.8
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 4.9e-173 611.7 480 65.0
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 6.4e-173 611.3 480 64.2
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 8.3e-173 610.9 480 64.2
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 8.3e-173 610.9 504 61.3
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 1.1e-172 610.5 491 63.3
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 1.1e-172 610.5 491 63.5
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 7.1e-172 607.8 430 69.1
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 9.2e-172 607.4 474 65.0
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 9.2e-172 607.4 473 64.7
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 2.1e-171 606.3 493 62.9
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 2.7e-171 605.9 501 63.3
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 2.7e-171 605.9 512 61.5
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 1.3e-170 603.6 477 63.9
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 3.0e-170 602.4 489 62.2
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 6.6e-170 601.3 478 63.8
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 6.6e-170 601.3 478 63.8
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 1.1e-169 600.5 445 65.8
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 3.3e-169 599.0 477 63.7
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 5.6e-169 598.2 474 64.1
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 2.8e-168 595.9 487 62.6
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 1.1e-167 594.0 486 62.8
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 3.4e-166 589.0 476 62.4
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 7.6e-166 587.8 491 61.7
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 2.2e-165 586.3 448 64.1
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 6.4e-165 584.7 485 61.6
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 1.9e-164 583.2 461 65.3
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 3.2e-164 582.4 453 63.6
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 5.4e-164 581.6 515 58.1
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 2.7e-163 579.3 489 60.1
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 4.6e-163 578.6 486 60.3
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 6.0e-163 578.2 490 62.0
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 1.3e-162 577.0 501 59.9
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.3e-162 577.0 483 61.5
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 6.6e-162 574.7 517 57.6
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 4.0e-159 565.5 500 59.0
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 5.8e-158 561.6 488 59.8
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 2.1e-155 553.1 473 59.2
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 7.8e-155 551.2 475 58.9
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 3.9e-154 548.9 488 56.6
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 6.6e-154 548.1 412 65.0
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 9.6e-153 544.3 451 61.9
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 9.0e-151 537.7 491 57.2
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 1.5e-150 537.0 494 56.7
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 2.9e-149 532.7 437 62.5
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 1.2e-142 510.8 523 53.3
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 4.5e-142 508.8 513 54.0
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 1.0e-138 497.7 483 55.9
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 8.7e-138 494.6 482 55.4
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 4.3e-129 465.7 315 73.7
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 1.4e-122 444.1 351 64.7
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 5.7e-121 438.7 552 44.9
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 8.2e-120 434.9 393 57.3
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 1.1e-119 434.5 482 48.1
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 3.1e-111 406.4 404 54.0
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 9.1e-111 404.8 543 42.7
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 2.9e-101 373.2 310 62.6
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 8.5e-101 371.7 482 46.9
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 8.5e-101 371.7 315 61.0
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 1.4e-98 364.4 464 44.8
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 7.5e-81 305.4 280 57.1
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 1.7e-69 267.7 306 52.3
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 2.9e-64 250.4 336 40.8
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 2.5e-60 237.3 394 35.0
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.8e-59 233.8 144 75.7
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 3.5e-46 190.3 811 24.0
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 1.6e-38 164.9 337 32.3
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.3e-35 155.2 111 68.5
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 1.8e-34 151.4 118 63.6
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 3.4e-25 120.6 73 75.3
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.3e-24 118.6 136 50.7
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 3.2e-23 114.0 131 51.1
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 1.6e-14 85.1 113 44.2
MD10G1121100 Malus domestica HOM05D006341 ORTHO05D000377 4.6e-06 57.0 45 60.0
arahy.Tifrunner.gnm1.ann1.UTA44Z Arachis hypogaea HOM05D006341 ORTHO05D000377 7.9e-06 56.2 31 77.4


User provided reference genes

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