Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 8.1e-213 743.4 363 100.0
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 9.0e-212 740.0 363 99.4
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.8e-207 725.7 363 98.3
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 6.2e-205 717.2 362 95.6
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 6.9e-204 713.8 360 95.6
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 8.4e-194 680.2 360 91.4
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 3.5e-192 674.9 359 90.8
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 7.6e-187 657.1 357 87.1
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 3.6e-184 648.3 358 85.8
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 7.9e-184 647.1 357 85.7
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 2.3e-183 645.6 357 85.2
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 6.7e-183 644.0 357 84.6
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 1.1e-182 643.3 357 84.9
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 2.5e-182 642.1 357 84.6
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 2.5e-182 642.1 357 84.6
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 2.5e-182 642.1 357 84.0
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 3.3e-182 641.7 357 84.9
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 9.7e-182 640.2 356 84.8
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.3e-181 639.8 359 83.3
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 2.2e-181 639.0 358 84.9
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 2.8e-181 638.6 358 83.8
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 2.8e-181 638.6 358 83.8
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 3.7e-181 638.3 357 84.3
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 3.7e-181 638.3 358 83.8
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 4.8e-181 637.9 362 84.0
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 6.3e-181 637.5 357 83.2
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 8.2e-181 637.1 356 84.3
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.1e-180 636.7 357 83.2
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 2.4e-180 635.6 357 83.5
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 3.1e-180 635.2 357 84.0
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 4.1e-180 634.8 354 83.9
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 4.1e-180 634.8 359 83.3
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 4.1e-180 634.8 358 83.8
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 5.3e-180 634.4 357 84.3
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 9.1e-180 633.6 355 83.4
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 9.1e-180 633.6 359 81.9
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 1.5e-179 632.9 357 82.6
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 2.6e-179 632.1 358 82.7
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 4.5e-179 631.3 362 86.7
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 5.9e-179 630.9 359 83.3
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 5.9e-179 630.9 362 82.3
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 5.9e-179 630.9 358 83.0
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 5.9e-179 630.9 363 82.1
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 7.7e-179 630.6 358 83.0
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 1.0e-178 630.2 358 83.2
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 1.3e-178 629.8 357 81.5
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 1.3e-178 629.8 371 81.4
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 1.3e-178 629.8 354 83.3
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 1.3e-178 629.8 357 82.9
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.7e-178 629.4 362 82.0
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.2e-178 629.0 358 81.6
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 2.2e-178 629.0 356 84.3
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 5.0e-178 627.9 361 83.4
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 6.5e-178 627.5 361 82.8
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 1.1e-177 626.7 378 79.4
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.1e-177 626.7 359 82.5
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 1.4e-177 626.3 366 81.7
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 1.4e-177 626.3 358 82.4
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 2.5e-177 625.5 358 81.6
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 4.2e-177 624.8 363 82.9
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 4.2e-177 624.8 356 83.4
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 7.9e-176 620.5 354 81.6
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 7.9e-176 620.5 353 81.9
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 1.0e-175 620.2 358 81.0
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 3.0e-175 618.6 360 81.9
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 6.7e-175 617.5 357 81.5
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 6.7e-175 617.5 354 81.6
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 8.8e-175 617.1 357 80.1
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.1e-174 616.7 358 80.7
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 1.5e-174 616.3 358 81.0
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 1.5e-174 616.3 368 80.7
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.6e-174 615.5 358 80.4
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 1.7e-173 612.8 356 81.7
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 2.8e-173 612.1 356 81.7
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 4.8e-173 611.3 356 79.5
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 6.3e-173 610.9 356 81.2
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 1.4e-172 609.8 359 80.8
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 1.8e-172 609.4 356 80.1
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 2.4e-172 609.0 353 79.6
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 6.9e-172 607.4 359 80.5
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 2.6e-171 605.5 358 79.9
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 2.6e-171 605.5 371 77.4
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 5.9e-171 604.4 360 79.4
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 5.9e-171 604.4 362 78.2
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 5.9e-171 604.4 362 79.8
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 2.2e-170 602.4 359 84.1
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 6.5e-170 600.9 381 75.6
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 6.5e-170 600.9 367 77.7
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 8.5e-170 600.5 358 79.6
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 1.1e-169 600.1 363 79.9
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 5.5e-169 597.8 353 79.9
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 7.2e-169 597.4 352 79.5
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 7.2e-169 597.4 353 79.3
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 2.7e-168 595.5 341 81.2
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 3.6e-168 595.1 371 77.4
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 1.4e-167 593.2 376 73.9
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 9.7e-166 587.0 373 75.9
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 4.8e-165 584.7 368 76.4
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 4.8e-165 584.7 381 73.8
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 4.1e-164 581.6 360 77.2
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.0e-163 579.3 367 75.7
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.0e-162 577.0 368 74.5
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 2.9e-162 575.5 368 73.9
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 3.8e-162 575.1 375 73.9
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 5.0e-162 574.7 355 77.2
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 3.6e-160 568.5 359 76.9
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.5e-158 563.1 358 75.4
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 3.3e-158 562.0 350 73.4
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 1.7e-157 559.7 348 76.1
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 6.3e-157 557.8 358 74.6
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 8.2e-157 557.4 358 75.7
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.5e-155 552.0 347 74.9
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 4.5e-155 551.6 358 73.7
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 6.5e-154 547.7 356 71.1
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 1.1e-153 547.0 292 88.7
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 1.9e-153 546.2 356 70.5
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 4.7e-152 541.6 347 72.0
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.4e-151 540.0 356 73.3
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.4e-150 535.4 331 73.4
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 7.5e-150 534.3 430 63.7
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 9.8e-150 533.9 356 71.9
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 2.4e-148 529.3 347 69.7
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 4.1e-148 528.5 357 72.0
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 5.9e-147 524.6 280 87.9
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 2.3e-146 522.7 371 68.2
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 9.5e-145 517.3 364 70.9
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 1.0e-143 513.8 354 71.5
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 4.9e-141 505.0 363 66.1
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 6.1e-136 488.0 345 66.7
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 8.9e-135 484.2 290 78.6
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 8.3e-133 477.6 352 62.8
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 7.3e-129 464.5 242 89.7
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 8.0e-128 461.1 310 68.1
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 1.5e-126 456.8 356 65.2
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 8.3e-125 451.1 334 60.2
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 1.9e-121 439.9 718 38.7
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 4.1e-116 422.2 265 75.8
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 1.1e-108 397.5 357 54.3
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 3.6e-104 382.5 239 74.5
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 8.4e-101 371.3 338 57.7
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.8e-95 353.6 332 55.1
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 6.9e-95 351.7 248 64.1
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 1.6e-91 340.5 219 72.6
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 6.0e-83 312.0 202 73.3
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 6.7e-82 308.5 290 56.9
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 1.3e-48 198.0 135 72.6
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 7.7e-46 188.7 125 76.0
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 1.7e-45 187.6 125 75.2
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 2.2e-45 187.2 100 88.0
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 5.0e-45 186.0 125 75.2
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 8.5e-45 185.3 117 81.2
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.6e-43 179.9 171 52.0
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 1.8e-42 177.6 124 71.8
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.6e-41 173.7 100 85.0
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.8e-39 167.5 114 70.2
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 3.8e-37 159.8 126 62.7
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 4.2e-36 156.4 98 73.5
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 6.3e-32 142.5 123 61.8
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.0e-29 135.2 111 60.4
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 9.8e-25 118.6 74 78.4
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 1.8e-23 114.4 72 75.0
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 1.8e-23 114.4 64 85.9
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 9.2e-23 112.1 65 78.5
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 2.6e-17 94.0 84 58.3
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 3.4e-17 93.6 65 64.6
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.2e-16 90.9 59 71.2
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.0e-14 84.3 125 45.6
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 2.3e-13 80.9 49 71.4
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 1.5e-12 78.2 62 59.7
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 1.1e-07 62.0 41 68.3
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 3.2e-07 60.5 31 90.3


User provided reference genes

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