Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A12G149700 Gossypium hirsutum HOM05D002653 ORTHO05D002623 1.3e-64 249.6 128 100.0
Gohir.A05G199033 Gossypium hirsutum HOM05D002653 ORTHO05D002623 5.4e-63 244.2 128 98.4
Gohir.A11G129200 Gossypium hirsutum HOM05D002653 ORTHO05D002623 5.1e-53 211.1 113 94.7
Gohir.A08G075400 Gossypium hirsutum HOM05D002653 ORTHO05D002623 5.0e-48 194.5 99 98.0
Gohir.A05G394600 Gossypium hirsutum HOM05D002653 ORTHO05D002623 4.6e-38 161.4 84 97.6
Gohir.D04G020301 Gossypium hirsutum HOM05D002653 ORTHO05D002623 1.0e-37 160.2 84 96.4
Gorai.012G024100 Gossypium raimondii HOM05D002653 ORTHO05D002623 1.0e-37 160.2 84 96.4
Gohir.A04G088400 Gossypium hirsutum HOM05D002653 ORTHO05D002623 8.8e-29 130.6 69 94.2
Duzib114G0204 Durio zibethinus HOM05D002653 ORTHO05D002623 1.1e-28 130.2 84 78.6
Thecc.01G150000 Theobroma cacao HOM05D002653 ORTHO05D002623 6.3e-27 124.4 83 74.7
COL.COLO4_33574 Corchorus olitorius HOM05D002653 ORTHO05D002623 4.1e-26 121.7 84 76.2
GSVIVG01019371001 Vitis vinifera HOM05D002653 ORTHO05D002623 1.5e-12 76.6 92 43.5
Aa31LG11G3960 Aethionema arabicum HOM05D002653 ORTHO05D002623 9.8e-12 73.9 92 44.6
TWI34G1636 Tripterygium wilfordii HOM05D002653 ORTHO05D002623 9.8e-12 73.9 91 45.1
Dinv38369 Davidia involucrata HOM05D002653 ORTHO05D002623 3.7e-11 72.0 95 47.4
HanXRQChr07g0186761 Helianthus annuus HOM05D002653 ORTHO05D002623 8.3e-11 70.9 88 45.5
MD17G1156800 Malus domestica HOM05D002653 ORTHO05D002623 1.4e-10 70.1 92 42.4
THA.LOC104814962 Tarenaya hassleriana HOM05D002653 ORTHO05D002623 2.4e-10 69.3 89 43.8
Cfa016258 Carpinus fangiana HOM05D002653 ORTHO05D002623 5.4e-10 68.2 89 44.9
Potri.001G455600 Populus trichocarpa HOM05D002653 ORTHO05D002623 5.4e-10 68.2 87 42.5
Atru.chr8.1040 Acer truncatum HOM05D002653 ORTHO05D002623 7.0e-10 67.8 89 44.9
AL6G36330 Arabidopsis lyrata HOM05D002653 ORTHO05D002623 7.0e-10 67.8 89 42.7
AT5G24740 Arabidopsis thaliana HOM05D002653 ORTHO05D002623 9.1e-10 67.4 89 43.8
Lsat_1_v5_gn_6_56501 Lactuca sativa HOM05D002653 ORTHO05D002623 1.2e-09 67.0 88 43.2
Nn7g37406 Nelumbo nucifera HOM05D002653 ORTHO05D002623 1.2e-09 67.0 89 47.2
Lsat_1_v5_gn_8_5081 Lactuca sativa HOM05D002653 ORTHO05D002623 1.6e-09 66.6 88 43.2
Medtr2g007250 Medicago truncatula HOM05D002653 ORTHO05D002623 1.6e-09 66.6 86 46.5
PGR044G0026 Punica granatum HOM05D002653 ORTHO05D002623 1.6e-09 66.6 83 47.0
Manes.11G165700 Manihot esculenta HOM05D002653 ORTHO05D002623 2.7e-09 65.9 101 40.6
Thhalv10003500m.g Eutrema salsugineum HOM05D002653 ORTHO05D002623 3.5e-09 65.5 89 41.6
Manes.09G076300 Manihot esculenta HOM05D002653 ORTHO05D002623 3.5e-09 65.5 94 42.6
Sabra16G0308200 Salix brachista HOM05D002653 ORTHO05D002623 5.9e-09 64.7 91 42.9
A06p35550 Brassica napus HOM05D002653 ORTHO05D002623 1.0e-08 63.9 92 40.2
BraA06t26480Z Brassica rapa HOM05D002653 ORTHO05D002623 1.0e-08 63.9 92 40.2
Carub.0006s2259 Capsella rubella HOM05D002653 ORTHO05D002623 2.9e-08 62.4 89 40.4
QL04p064992 Quercus lobata HOM05D002653 ORTHO05D002623 2.9e-08 62.4 92 43.5
Prupe.3G028500 Prunus persica HOM05D002653 ORTHO05D002623 5.0e-08 61.6 86 40.7
Sc15g0007450 Simmondsia chinensis HOM05D002653 ORTHO05D002623 5.0e-08 61.6 88 39.8
C07p42990 Brassica napus HOM05D002653 ORTHO05D002623 6.5e-08 61.2 89 40.4
BolC7t44828H Brassica oleracea HOM05D002653 ORTHO05D002623 6.5e-08 61.2 89 40.4
Hma1.2p1_1074F.1_g254380 Hydrangea macrophylla HOM05D002653 ORTHO05D002623 6.5e-08 61.2 85 41.2
Rhsim13G0127300 Rhododendron simsii HOM05D002653 ORTHO05D002623 8.5e-08 60.8 131 30.5
ECA233G1976 Erigeron canadensis HOM05D002653 ORTHO05D002623 1.1e-07 60.5 88 40.9
AUR62026805 Chenopodium quinoa HOM05D002653 ORTHO05D002623 1.5e-07 60.1 93 41.9
BcaNung01253 Brassica carinata HOM05D002653 ORTHO05D002623 4.2e-07 58.5 89 41.6
Ciclev10012577m.g Citrus clementina HOM05D002653 ORTHO05D002623 4.2e-07 58.5 105 36.2
TPR.G8155 Trifolium pratense HOM05D002653 ORTHO05D002623 9.4e-07 57.4 95 43.2
CANSAT01G2419 Cannabis sativa HOM05D002653 ORTHO05D002623 1.2e-06 57.0 100 42.0
DCAR_018920 Daucus carota HOM05D002653 ORTHO05D002623 2.1e-06 56.2 89 38.2
Lalb_Chr01g0009381 Lupinus albus HOM05D002653 ORTHO05D002623 2.7e-06 55.8 88 42.0
vmacro03485 Vaccinium macrocarpon HOM05D002653 ORTHO05D002623 3.6e-06 55.5 67 40.3
LjContig00141g0016117 Lotus japonicus HOM05D002653 ORTHO05D002623 6.1e-06 54.7 90 40.0
Psat0s3513g0080 Pisum sativum HOM05D002653 ORTHO05D002623 6.1e-06 54.7 91 42.9
SGA_v2.0_scaffold131G34416 Striga asiatica HOM05D002653 ORTHO05D002623 6.1e-06 54.7 89 38.2
EL10Ac1g01415 Beta vulgaris HOM05D002653 ORTHO05D002623 8.0e-06 54.3 88 36.4
FAN14G5588 Fragaria x ananassa HOM05D002653 ORTHO05D002623 8.0e-06 54.3 88 39.8
Lj4g0020533 Lotus japonicus HOM05D002653 ORTHO05D002623 8.0e-06 54.3 90 40.0


User provided reference genes

Program Settings