Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 5.1e-210 734.2 378 100.0
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.1e-203 712.2 378 97.1
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 7.9e-203 710.3 378 96.6
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 2.5e-172 609.0 378 82.8
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 2.4e-159 565.8 378 77.2
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 4.7e-155 551.6 378 75.9
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 3.5e-142 508.8 379 71.5
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 4.6e-142 508.4 378 70.6
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 9.5e-140 500.7 387 69.8
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 2.8e-139 499.2 382 68.1
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 8.1e-139 497.7 382 67.5
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 1.1e-138 497.3 379 66.8
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 1.8e-138 496.5 379 67.3
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 1.5e-137 493.4 379 68.3
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 2.2e-136 489.6 379 67.5
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 1.4e-135 486.9 379 65.4
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 6.0e-134 481.5 379 67.3
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 3.3e-132 475.7 379 66.2
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 5.6e-132 474.9 382 65.2
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 6.2e-131 471.5 379 65.7
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 1.4e-130 470.3 379 65.4
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 2.4e-130 469.5 380 64.7
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 1.1e-127 460.7 380 63.9
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 4.2e-127 458.8 379 64.6
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 3.9e-125 452.2 379 61.7
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 6.6e-125 451.4 379 62.3
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 1.9e-124 449.9 380 63.4
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 9.6e-124 447.6 378 63.5
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 1.6e-123 446.8 379 60.9
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 2.8e-123 446.0 381 63.3
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 4.8e-123 445.3 379 60.9
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 4.0e-122 442.2 379 58.6
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 4.0e-122 442.2 379 61.2
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 1.2e-121 440.7 379 60.4
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 2.6e-121 439.5 378 63.5
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 3.4e-121 439.1 380 61.8
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 3.4e-121 439.1 379 62.5
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 4.5e-121 438.7 379 62.0
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 3.8e-120 435.6 380 60.8
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 3.8e-120 435.6 378 63.0
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 4.9e-120 435.3 381 60.6
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 1.1e-119 434.1 379 60.2
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 1.1e-119 434.1 379 61.2
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 3.2e-119 432.6 379 62.3
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 3.2e-119 432.6 379 62.0
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 8.7e-117 424.5 377 58.4
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 3.3e-116 422.5 383 61.6
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 1.6e-115 420.2 380 60.3
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 1.6e-115 420.2 381 59.3
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 2.8e-115 419.5 383 60.1
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 6.9e-114 414.8 379 59.6
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 9.0e-114 414.5 380 59.7
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 1.5e-113 413.7 383 59.0
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 2.6e-113 412.9 379 58.8
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 1.1e-111 407.5 379 58.6
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 1.9e-111 406.8 335 63.6
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 9.3e-111 404.4 385 56.6
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 2.7e-110 402.9 379 57.3
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 2.7e-110 402.9 385 57.1
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 1.0e-109 401.0 383 58.0
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 1.5e-108 397.1 385 58.7
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 1.9e-108 396.7 401 55.6
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 3.3e-108 396.0 383 56.1
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 7.4e-108 394.8 379 57.3
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 9.6e-108 394.4 383 56.1
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 2.1e-107 393.3 383 56.9
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 2.1e-107 393.3 379 56.2
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 9.0e-106 387.9 380 57.6
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 1.2e-105 387.5 379 56.2
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 1.5e-105 387.1 383 55.4
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 1.5e-105 387.1 384 55.7
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 1.5e-105 387.1 384 55.7
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 3.4e-105 386.0 389 54.2
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 5.8e-105 385.2 383 55.1
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 7.6e-105 384.8 383 54.3
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 2.9e-104 382.9 389 53.7
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 2.5e-103 379.8 379 54.6
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 5.5e-103 378.6 380 56.8
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 2.1e-102 376.7 387 53.5
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 2.1e-102 376.7 387 53.5
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 2.1e-102 376.7 326 61.0
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 2.1e-102 376.7 384 54.7
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 7.9e-102 374.8 384 54.9
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 5.1e-101 372.1 390 51.3
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 8.7e-101 371.3 382 54.2
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 2.5e-100 369.8 401 54.1
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 3.3e-100 369.4 379 55.7
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 7.4e-100 368.2 407 51.6
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 2.0e-97 360.1 385 50.1
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 1.0e-93 347.8 386 50.0
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 9.4e-87 324.7 383 48.0
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 1.4e-82 310.8 285 57.9
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 1.3e-80 304.3 259 62.2
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 6.7e-77 292.0 259 58.7
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 5.7e-76 288.9 225 69.8
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 1.8e-74 283.9 319 53.0
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 5.3e-66 255.8 201 64.2
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 7.7e-65 251.9 199 69.3
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 7.7e-65 251.9 199 68.8
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.0e-64 251.5 161 85.7
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 1.3e-64 251.1 391 39.9
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 2.0e-60 237.3 391 37.1
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 2.1e-54 217.2 170 66.5
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 3.6e-54 216.5 383 38.9
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 1.8e-53 214.2 167 67.1
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 1.2e-52 211.5 166 65.1
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.3e-51 208.0 169 65.7
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 7.0e-50 202.2 180 60.0
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 2.1e-46 190.7 380 36.3
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 4.0e-45 186.4 280 41.1
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 5.2e-45 186.0 234 45.3
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.5e-39 167.9 99 82.8
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.3e-39 166.4 92 89.1
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 1.4e-34 151.4 387 31.8
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 2.3e-32 144.1 161 53.4
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 1.6e-30 137.9 162 51.2
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 1.4e-29 134.8 176 47.2
Gohir.A01G231820 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.1e-26 125.2 68 91.2
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 2.8e-22 110.5 144 48.6
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 2.7e-17 94.0 75 64.0
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 2.8e-14 84.0 167 29.9
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 1.1e-13 82.0 81 53.1
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 8.4e-11 72.4 428 23.8
Gohir.D03G000201 Gossypium hirsutum HOM05D006028 ORTHO05D048139 1.4e-10 71.6 37 91.9
Gorai.003G000500 Gossypium raimondii HOM05D006028 ORTHO05D048139 1.4e-10 71.6 37 91.9
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 4.2e-10 70.1 84 42.9


User provided reference genes

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