Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A07G073600 Gossypium hirsutum HOM05D004162 ORTHO05D004543 6.9e-195 683.7 328 100.0
Gorai.001G082700 Gossypium raimondii HOM05D004162 ORTHO05D004543 6.3e-180 634.0 317 95.6
Gohir.D07G078300 Gossypium hirsutum HOM05D004162 ORTHO05D004543 1.8e-179 632.5 317 95.3
Gohir.D12G193100 Gossypium hirsutum HOM05D004162 ORTHO05D004543 1.4e-131 473.4 315 72.7
Gorai.008G207900 Gossypium raimondii HOM05D004162 ORTHO05D004543 1.4e-131 473.4 315 72.7
Gohir.A12G191000 Gossypium hirsutum HOM05D004162 ORTHO05D004543 7.0e-131 471.1 315 72.7
Thecc.03G055600 Theobroma cacao HOM05D004162 ORTHO05D004543 7.8e-122 441.0 317 67.5
Duzib205G1017 Durio zibethinus HOM05D004162 ORTHO05D004543 3.3e-120 435.6 320 68.8
COL.COLO4_05717 Corchorus olitorius HOM05D004162 ORTHO05D004543 9.9e-85 317.8 237 63.3
Atru.chr9.1725 Acer truncatum HOM05D004162 ORTHO05D004543 4.9e-84 315.5 317 48.3
Ciclev10008209m.g Citrus clementina HOM05D004162 ORTHO05D004543 6.4e-84 315.1 318 48.7
Cfa019653 Carpinus fangiana HOM05D004162 ORTHO05D004543 5.5e-83 312.0 319 50.2
Haze_18859 Corylus avellana HOM05D004162 ORTHO05D004543 4.6e-82 308.9 319 48.9
Atru.chr9.1709 Acer truncatum HOM05D004162 ORTHO05D004543 1.8e-81 307.0 317 47.0
GSVIVG01008445001 Vitis vinifera HOM05D004162 ORTHO05D004543 9.6e-80 301.2 327 45.9
Lj5C158G4 Lonicera japonica HOM05D004162 ORTHO05D004543 2.1e-79 300.1 314 49.4
TWI81G0681 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 4.8e-79 298.9 318 45.9
CiPaw.15G143600 Carya illinoinensis HOM05D004162 ORTHO05D004543 1.1e-78 297.7 318 49.1
TAR371G1103 Trochodendron aralioides HOM05D004162 ORTHO05D004543 4.9e-76 288.9 314 47.1
Hma1.2p1_3150F.1_g333200 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 1.9e-75 287.0 314 46.8
Manes.06G005900 Manihot esculenta HOM05D004162 ORTHO05D004543 4.2e-75 285.8 286 49.7
Lalb_Chr05g0221631 Lupinus albus HOM05D004162 ORTHO05D004543 2.3e-73 280.0 318 46.2
QL10p029785 Quercus lobata HOM05D004162 ORTHO05D004543 3.0e-73 279.6 403 40.2
CSS0046385 Camellia sinensis var. sinensis HOM05D004162 ORTHO05D004543 6.7e-73 278.5 315 45.7
Cc04_g06230 Coffea canephora HOM05D004162 ORTHO05D004543 6.7e-73 278.5 319 45.1
CANSAT54G2092 Cannabis sativa HOM05D004162 ORTHO05D004543 1.5e-72 277.3 318 45.9
Peaxi162Scf00050g02313 Petunia axillaris HOM05D004162 ORTHO05D004543 1.6e-71 273.9 314 43.9
Ah.04g164220 Amaranthus hybridus HOM05D004162 ORTHO05D004543 8.2e-71 271.6 317 42.9
CAN.G660.38 Capsicum annuum HOM05D004162 ORTHO05D004543 1.1e-70 271.2 316 44.3
MSTRG.9305 Avicennia marina HOM05D004162 ORTHO05D004543 1.4e-70 270.8 316 44.6
PGR083G0911 Punica granatum HOM05D004162 ORTHO05D004543 1.8e-70 270.4 316 44.0
CANSAT80G1525 Cannabis sativa HOM05D004162 ORTHO05D004543 2.4e-70 270.0 318 44.7
Lsat_1_v5_gn_2_63961 Lactuca sativa HOM05D004162 ORTHO05D004543 2.4e-70 270.0 314 44.6
ECA238G4801 Erigeron canadensis HOM05D004162 ORTHO05D004543 3.1e-70 269.6 314 42.4
Solyc02g070300.4 Solanum lycopersicum HOM05D004162 ORTHO05D004543 5.3e-70 268.9 314 43.0
PGSC0003DMG400021171 Solanum tuberosum HOM05D004162 ORTHO05D004543 9.0e-70 268.1 314 43.6
Sopen02g019390 Solanum pennellii HOM05D004162 ORTHO05D004543 1.2e-69 267.7 314 43.0
Migut.D01539 Erythranthe guttata HOM05D004162 ORTHO05D004543 5.0e-68 262.3 314 42.7
Nitab4.5_0000869g0150 Nicotiana tabacum HOM05D004162 ORTHO05D004543 1.1e-67 261.2 327 41.3
SalBow3G1690 Salvia bowleyana HOM05D004162 ORTHO05D004543 4.2e-67 259.2 313 42.5
Eucgr.B00998 Eucalyptus grandis HOM05D004162 ORTHO05D004543 5.5e-67 258.8 316 42.7
HanXRQChr14g0447361 Helianthus annuus HOM05D004162 ORTHO05D004543 5.5e-67 258.8 315 43.2
Oeu046631.1 Olea europaea HOM05D004162 ORTHO05D004543 5.5e-67 258.8 313 44.7
Nn4g24245 Nelumbo nucifera HOM05D004162 ORTHO05D004543 9.3e-67 258.1 315 42.2
SalBow3G1953 Salvia bowleyana HOM05D004162 ORTHO05D004543 9.3e-67 258.1 313 42.2
MBI08_g04930_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 1.2e-66 257.7 314 41.4
Sed0019203 Sechium edule HOM05D004162 ORTHO05D004543 1.2e-66 257.7 317 42.0
Psat4g000200 Pisum sativum HOM05D004162 ORTHO05D004543 1.6e-66 257.3 310 44.8
Dinv08781 Davidia involucrata HOM05D004162 ORTHO05D004543 2.1e-66 256.9 265 49.1
Potri.012G046400 Populus trichocarpa HOM05D004162 ORTHO05D004543 3.9e-65 252.7 255 49.4
ClCG04G010610 Citrullus lanatus HOM05D004162 ORTHO05D004543 4.3e-64 249.2 317 42.3
VMungo0251G2472 Vigna mungo HOM05D004162 ORTHO05D004543 2.8e-63 246.5 305 43.6
CsaV3_1G007180 Cucumis sativus L. HOM05D004162 ORTHO05D004543 1.1e-62 244.6 319 41.4
Nn3g21925 Nelumbo nucifera HOM05D004162 ORTHO05D004543 1.4e-62 244.2 306 41.2
SGA_v2.0_scaffold172G39016 Striga asiatica HOM05D004162 ORTHO05D004543 1.4e-62 244.2 326 39.6
EL10Ac4g08358 Beta vulgaris HOM05D004162 ORTHO05D004543 1.8e-62 243.8 364 37.1
Glyma.05G246600 Glycine max HOM05D004162 ORTHO05D004543 1.8e-62 243.8 287 43.6
RcHm_v2.0_Chr7g0178331 Rosa chinensis HOM05D004162 ORTHO05D004543 1.0e-60 238.0 306 40.8
MD06G1227400 Malus domestica HOM05D004162 ORTHO05D004543 1.9e-59 233.8 315 39.0
Glyma.08G054800 Glycine max HOM05D004162 ORTHO05D004543 7.2e-59 231.9 280 44.6
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 2.7e-58 229.9 314 39.2
Ca_17185_v3 Cicer arietinum L. HOM05D004162 ORTHO05D004543 2.7e-58 229.9 309 42.4
MD13G1006200 Malus domestica HOM05D004162 ORTHO05D004543 2.7e-58 229.9 316 39.9
unitig_22.g6151 Utricularia gibba HOM05D004162 ORTHO05D004543 1.4e-57 227.6 317 40.7
FvH4_6g53500 Fragaria vesca HOM05D004162 ORTHO05D004543 1.8e-57 227.3 321 39.6
FAN14G2905 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.8e-57 227.3 321 39.6
Medtr8g107380 Medicago truncatula HOM05D004162 ORTHO05D004543 2.3e-57 226.9 293 41.6
FAN05G0184 Fragaria x ananassa HOM05D004162 ORTHO05D004543 8.8e-57 224.9 324 39.2
arahy.Tifrunner.gnm1.ann1.B7AHJA Arachis hypogaea HOM05D004162 ORTHO05D004543 2.6e-56 223.4 263 44.9
arahy.Tifrunner.gnm1.ann1.681ID1 Arachis hypogaea HOM05D004162 ORTHO05D004543 7.4e-56 221.9 263 44.1
arahy.Tifrunner.gnm1.ann1.7MCX13 Arachis hypogaea HOM05D004162 ORTHO05D004543 1.7e-55 220.7 263 44.1
Aqoxy6G00116 Aquilegia oxysepala HOM05D004162 ORTHO05D004543 2.2e-55 220.3 314 36.9
FAN02G2531 Fragaria x ananassa HOM05D004162 ORTHO05D004543 9.1e-54 214.9 321 38.0
Prupe.5G233900 Prunus persica HOM05D004162 ORTHO05D004543 9.1e-54 214.9 240 45.4
Haze_09240 Corylus avellana HOM05D004162 ORTHO05D004543 5.0e-52 209.1 306 36.9
Sc04g0004810 Simmondsia chinensis HOM05D004162 ORTHO05D004543 6.5e-52 208.8 259 41.7
Cfa011869 Carpinus fangiana HOM05D004162 ORTHO05D004543 1.9e-51 207.2 306 36.9
FAN02G1371 Fragaria x ananassa HOM05D004162 ORTHO05D004543 2.5e-51 206.8 352 36.1
FAN09G1804 Fragaria x ananassa HOM05D004162 ORTHO05D004543 5.5e-51 205.7 301 38.2
TWI75G0727 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 7.2e-51 205.3 326 34.0
MBI07_g11051_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 1.6e-50 204.1 316 36.7
Peaxi162Scf00420g00077 Petunia axillaris HOM05D004162 ORTHO05D004543 2.1e-50 203.8 338 34.0
MELO3C002134.2 Cucumis melo HOM05D004162 ORTHO05D004543 2.7e-50 203.4 327 37.9
Nitab4.5_0001756g0030 Nicotiana tabacum HOM05D004162 ORTHO05D004543 4.7e-50 202.6 313 35.1
Nitab4.5_0005963g0070 Nicotiana tabacum HOM05D004162 ORTHO05D004543 1.0e-49 201.4 313 37.7
ATR0594G087 Amborella trichopoda HOM05D004162 ORTHO05D004543 1.1e-48 198.0 313 36.7
Rhsim02G0000200 Rhododendron simsii HOM05D004162 ORTHO05D004543 3.3e-48 196.4 304 37.5
Atru.chr1.59 Acer truncatum HOM05D004162 ORTHO05D004543 9.7e-48 194.9 305 35.7
DCAR_003065 Daucus carota HOM05D004162 ORTHO05D004543 1.3e-47 194.5 256 39.8
Lj4g0021249 Lotus japonicus HOM05D002609 ORTHO05D002820 2.4e-46 190.3 249 40.2
TAR636G2328 Trochodendron aralioides HOM05D004162 ORTHO05D004543 1.6e-45 187.6 239 42.3
Oeu011444.1 Olea europaea HOM05D004162 ORTHO05D004543 5.9e-45 185.7 325 35.4
THA.LOC104812555 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 1.7e-44 184.1 319 37.6
HPP92_005364 Vanilla planifolia HOM05D004162 ORTHO05D004543 3.8e-44 183.0 319 36.1
Dinv27223 Davidia involucrata HOM05D004162 ORTHO05D004543 1.6e-42 177.6 287 36.6
PSO210G3845 Papaver somniferum HOM05D004162 ORTHO05D004543 1.6e-42 177.6 383 32.4
Aa31LG5G17260 Aethionema arabicum HOM05D004162 ORTHO05D004543 1.0e-41 174.9 312 34.9
PSO832G0101 Papaver somniferum HOM05D004162 ORTHO05D004543 1.0e-41 174.9 388 32.0
Actinidia07535 Actinidia chinensis HOM05D004162 ORTHO05D004543 2.3e-41 173.7 273 37.0
Sp6g08970 Schrenkiella parvula HOM05D004162 ORTHO05D004543 3.3e-40 169.9 325 34.8
CANSAT78G2305 Cannabis sativa HOM05D004162 ORTHO05D004543 4.4e-40 169.5 321 33.0
THA.LOC104810218 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 4.4e-40 169.5 289 35.6
THA.LOC104826807 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 4.4e-40 169.5 289 35.6
Cc07_g00810 Coffea canephora HOM05D004162 ORTHO05D004543 7.5e-40 168.7 317 31.9
Thhalv10028628m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 9.7e-40 168.3 325 33.8
unitig_90.g27442 Utricularia gibba HOM05D004162 ORTHO05D004543 9.7e-40 168.3 288 34.4
Thhalv10013532m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 2.2e-39 167.2 277 37.2
PSO339G4834 Papaver somniferum HOM05D004162 ORTHO05D004543 2.2e-39 167.2 312 33.0
CDE11G0199 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 1.8e-38 164.1 240 35.8
PSO513G0134 Papaver somniferum HOM05D004162 ORTHO05D004543 1.8e-38 164.1 312 33.3
AL3G42790 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 3.5e-37 159.8 331 33.8
C09p70490 Brassica napus HOM05D004162 ORTHO05D004543 1.3e-36 157.9 275 35.3
Zm00001eb433700 Zea mays HOM05D004162 ORTHO05D004543 1.3e-36 157.9 307 32.6
Sp6g36540 Schrenkiella parvula HOM05D004162 ORTHO05D004543 1.7e-36 157.5 275 34.9
BcaB07g30993 Brassica carinata HOM05D004162 ORTHO05D004543 2.2e-36 157.1 322 35.7
CARHR103050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 2.2e-36 157.1 328 34.1
AT2G05210 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 5.0e-36 156.0 328 32.6
BraA10t45047Z Brassica rapa HOM05D004162 ORTHO05D004543 1.1e-35 154.8 275 34.5
Carub.0006s0520 Capsella rubella HOM05D004162 ORTHO05D004543 3.2e-35 153.3 276 35.1
AL6G16350 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 4.2e-35 152.9 276 36.2
BolC9t59794H Brassica oleracea HOM05D004162 ORTHO05D004543 5.5e-35 152.5 282 34.4
A10p30070 Brassica napus HOM05D004162 ORTHO05D004543 7.2e-35 152.1 275 34.2
AT5G06310 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 3.6e-34 149.8 276 35.9
Pp3c18_21900 Physcomitrium patens HOM05D004162 ORTHO05D004543 3.6e-34 149.8 333 31.2
CARHR207050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 1.0e-33 148.3 275 35.3
Phvul.002G330500 Phaseolus vulgaris HOM05D004162 ORTHO05D004543 1.8e-33 147.5 167 43.1
Ciclev10005180m.g Citrus clementina HOM05D004162 ORTHO05D004543 5.2e-33 146.0 242 35.5
Carub.0003s2670 Capsella rubella HOM05D004162 ORTHO05D004543 8.8e-33 145.2 333 30.3
BolC9t55513H Brassica oleracea HOM05D004162 ORTHO05D004543 5.7e-32 142.5 313 31.9
BcaC04g21892 Brassica carinata HOM05D004162 ORTHO05D004543 1.7e-31 141.0 313 32.9
C09p26100 Brassica napus HOM05D004162 ORTHO05D004543 1.7e-31 141.0 313 32.9
A09p20680 Brassica napus HOM05D004162 ORTHO05D004543 5.4e-30 136.0 313 32.6
BraA09t37672Z Brassica rapa HOM05D004162 ORTHO05D004543 4.5e-29 132.9 315 31.4
Hund17739 Selenicereus undatus HOM05D004162 ORTHO05D004543 2.2e-28 130.6 162 40.1
VMungo0251G0610 Vigna mungo HOM05D004162 ORTHO05D004543 5.0e-28 129.4 288 33.0
Mapoly0002s0230 Marchantia polymorpha HOM05D004162 ORTHO05D004543 4.2e-27 126.3 338 29.0
AagrBONN_evm.TU.Sc2ySwM_228.478 Anthoceros agrestis HOM05D004162 ORTHO05D004543 2.1e-26 124.0 285 31.6
HPP92_005316 Vanilla planifolia HOM05D004162 ORTHO05D004543 1.8e-25 120.9 194 36.1
BcaC06g32364 Brassica carinata HOM05D004162 ORTHO05D004543 8.8e-25 118.6 277 32.9
TPR.G1445 Trifolium pratense HOM05D004162 ORTHO05D004543 1.5e-24 117.9 150 44.0
AUR62037555 Chenopodium quinoa HOM05D004162 ORTHO05D004543 2.0e-21 107.5 193 31.6
vmacro09753 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 1.5e-19 101.3 168 35.1
Hma1.2p1_0013F.1_g007880 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 7.3e-19 99.0 167 31.7
Rhsim08G0126500 Rhododendron simsii HOM05D004162 ORTHO05D004543 2.8e-18 97.1 121 42.1
Cfa023195 Carpinus fangiana HOM05D004162 ORTHO05D004543 1.8e-17 94.4 110 38.2
CDE02G0891 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 4.0e-17 93.2 135 36.3
ATR1149G147 Amborella trichopoda HOM05D004162 ORTHO05D004543 1.5e-16 91.3 125 39.2
CBR_g32246 Chara braunii HOM05D004162 ORTHO05D004543 2.0e-16 90.9 283 25.8
CiPaw.09G010700 Carya illinoinensis HOM05D004162 ORTHO05D004543 2.6e-16 90.5 110 40.9
Sabra12G0032500 Salix brachista HOM05D004162 ORTHO05D004543 7.5e-16 89.0 83 55.4
SHI19078 Sapria himalayana HOM05D004162 ORTHO05D004543 1.7e-15 87.8 122 38.5
CBR_g34767 Chara braunii HOM05D004162 ORTHO05D004543 6.4e-15 85.9 294 24.5
QL10p030172 Quercus lobata HOM05D004162 ORTHO05D004543 4.4e-08 63.2 56 53.6
vmacro09754 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 1.1e-06 58.5 80 41.2


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