Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 6.4e-177 624.0 322 100.0
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 4.6e-167 591.3 322 94.4
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 1.7e-166 589.3 322 94.1
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 2.1e-135 486.1 330 76.7
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 1.1e-117 427.2 321 69.8
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 8.5e-113 411.0 330 69.1
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 2.2e-105 386.3 332 63.9
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 8.8e-102 374.4 324 61.7
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 3.7e-100 369.0 323 60.7
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 1.4e-99 367.1 330 60.0
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 1.4e-99 367.1 323 60.4
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 4.1e-99 365.5 321 61.1
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 9.4e-96 354.4 332 58.4
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 1.2e-95 354.0 328 58.8
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 2.7e-95 352.8 326 58.9
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 1.4e-94 350.5 328 57.9
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 1.8e-94 350.1 335 59.7
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 6.7e-94 348.2 322 59.6
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 8.8e-94 347.8 329 59.3
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.3e-92 344.0 321 62.0
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 2.2e-92 343.2 329 58.4
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 4.8e-92 342.0 330 57.9
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 6.3e-92 341.7 320 59.1
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 1.1e-91 340.9 330 59.1
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 1.6e-90 337.0 325 57.8
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 3.5e-90 335.9 325 57.8
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 1.3e-89 334.0 326 57.1
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 3.8e-89 332.4 325 56.6
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 3.8e-89 332.4 330 56.4
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 3.8e-89 332.4 326 56.1
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 1.5e-88 330.5 323 57.6
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 1.6e-87 327.0 322 57.1
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 1.6e-87 327.0 333 57.4
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 1.6e-87 327.0 327 57.5
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 1.6e-87 327.0 327 57.5
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 2.7e-87 326.2 323 56.3
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 3.6e-87 325.9 370 52.7
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 6.1e-87 325.1 339 58.1
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 2.3e-86 323.2 321 57.6
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 5.2e-86 322.0 323 56.3
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 5.2e-86 322.0 321 55.8
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 6.8e-86 321.6 327 55.0
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 1.2e-85 320.9 326 56.4
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 3.4e-85 319.3 331 55.6
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 1.7e-84 317.0 325 57.5
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 2.8e-84 316.2 321 56.1
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 2.8e-84 316.2 322 56.8
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 1.1e-83 314.3 323 54.5
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 1.8e-83 313.5 324 56.2
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 1.8e-83 313.5 327 55.0
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 5.4e-83 312.0 322 53.4
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 7.0e-83 311.6 325 55.7
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 1.6e-82 310.5 335 54.9
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 1.6e-82 310.5 323 53.6
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 1.3e-81 307.4 321 54.2
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 1.7e-81 307.0 324 54.6
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 3.8e-81 305.8 320 54.4
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 6.5e-81 305.1 324 53.7
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 6.5e-81 305.1 324 54.3
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 7.2e-80 301.6 324 54.6
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 2.1e-79 300.1 318 53.8
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 6.1e-79 298.5 323 53.3
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 4.0e-78 295.8 322 53.1
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 2.0e-77 293.5 322 53.1
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 5.7e-77 292.0 324 52.8
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 4.9e-76 288.9 330 51.8
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 6.3e-76 288.5 323 51.7
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 8.3e-76 288.1 321 52.3
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 1.1e-75 287.7 332 52.4
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.4e-75 286.6 324 53.7
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 4.1e-75 285.8 324 53.7
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 4.1e-75 285.8 324 53.7
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.6e-74 283.9 324 53.7
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 2.0e-74 283.5 332 49.7
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.3e-73 280.8 336 52.4
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.3e-73 280.8 336 52.7
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 3.8e-73 279.3 337 49.9
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 8.6e-73 278.1 324 50.9
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 1.5e-72 277.3 319 49.8
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 3.3e-72 276.2 326 49.7
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 1.2e-71 274.2 322 51.6
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 2.8e-71 273.1 322 49.1
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 3.6e-71 272.7 324 49.1
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 4.7e-71 272.3 326 51.2
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 1.0e-70 271.2 323 49.5
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 2.6e-69 266.5 322 49.7
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 4.4e-69 265.8 407 44.2
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 4.4e-69 265.8 321 49.5
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 4.4e-69 265.8 321 49.5
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 9.8e-69 264.6 322 47.8
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 1.7e-68 263.8 273 56.0
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 3.7e-68 262.7 325 52.0
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 3.7e-68 262.7 322 49.4
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 4.9e-68 262.3 331 50.2
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 2.4e-67 260.0 322 49.4
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 1.6e-66 257.3 322 49.4
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 2.7e-66 256.5 302 53.0
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 1.3e-65 254.2 324 47.8
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 2.3e-65 253.4 169 69.2
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 2.0e-61 240.4 336 47.0
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 2.0e-61 240.4 333 47.1
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 2.1e-55 220.3 322 42.2
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 2.5e-48 196.8 332 39.8
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 6.4e-44 182.2 322 37.9
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 2.3e-41 173.7 324 35.2
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 5.1e-41 172.6 175 53.1
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 4.3e-40 169.5 273 40.3
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 2.4e-35 153.7 267 42.3
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 1.2e-34 151.4 313 39.3
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 1.0e-33 148.3 320 37.2
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 8.7e-33 145.2 307 35.2
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 9.0e-30 135.2 343 30.9
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.7e-28 131.0 339 33.3
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 1.4e-27 127.9 356 29.8
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 1.2e-26 124.8 137 45.3
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 4.8e-23 112.8 138 43.5
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 6.2e-23 112.5 193 36.3
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 2.4e-19 100.5 185 40.5
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 9.3e-19 98.6 57 70.2
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 9.3e-19 98.6 57 70.2
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 1.6e-18 97.8 171 40.9
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 1.3e-17 94.7 237 34.2
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 5.6e-16 89.4 237 33.3
Actinidia25232 Actinidia chinensis HOM05D006355 ORTHO05D008284 9.6e-08 62.0 119 40.3


User provided reference genes

Program Settings