Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.1Z050166 Gossypium hirsutum HOM05D008622 ORTHO05D010757 3.8e-41 171.0 84 100.0
PGR111G0016 Punica granatum HOM05D008622 ORTHO05D010757 3.9e-33 144.4 89 82.0
C06p21400 Brassica napus HOM05D008622 ORTHO05D010757 1.1e-32 142.9 88 81.8
BolSC37t60776H Brassica oleracea HOM05D008622 ORTHO05D010757 1.1e-32 142.9 88 81.8
BolSC45t60930H Brassica oleracea HOM05D008622 ORTHO05D010757 1.1e-32 142.9 88 81.8
BraSC25t45888Z Brassica rapa HOM05D008622 ORTHO05D010757 1.1e-32 142.9 88 81.8
BraSC59t46518Z Brassica rapa HOM05D008622 ORTHO05D010757 1.1e-32 142.9 88 81.8
CAN.G612.10 Capsicum annuum HOM05D008622 ORTHO05D010757 7.3e-32 140.2 88 83.0
PSO548G0027 Papaver somniferum HOM05D008622 ORTHO05D010757 7.3e-32 140.2 89 80.9
Sed0001678 Sechium edule HOM05D008622 ORTHO05D010757 9.5e-32 139.8 83 84.3
Sed0011032 Sechium edule HOM05D008622 ORTHO05D010757 9.5e-32 139.8 83 84.3
Sed0018360 Sechium edule HOM05D008622 ORTHO05D010757 9.5e-32 139.8 83 84.3
CAN.G877.8 Capsicum annuum HOM05D008622 ORTHO05D010757 1.6e-31 139.0 88 83.0
Nn020s41492 Nelumbo nucifera HOM05D008622 ORTHO05D010757 4.7e-31 137.5 84 83.3
Peaxi162Scf00110g00044 Petunia axillaris HOM05D008622 ORTHO05D010757 5.2e-30 134.0 83 80.7
Gohir.A12G078500 Gossypium hirsutum HOM05D008622 ORTHO05D010757 8.9e-30 133.3 68 94.1
Gorai.001G180700 Gossypium raimondii HOM05D008622 ORTHO05D010757 3.7e-28 127.9 61 100.0
Gohir.D08G095680 Gossypium hirsutum HOM05D008622 ORTHO05D010757 1.1e-27 126.3 84 77.4
DCAR_032466 Daucus carota HOM05D008622 ORTHO05D010757 2.4e-27 125.2 77 83.1
LjContig00489g0025793 Lotus japonicus HOM05D008622 ORTHO05D010757 2.4e-27 125.2 74 85.1
LjContig00318g0003846 Lotus japonicus HOM05D008622 ORTHO05D010757 2.0e-26 122.1 79 78.5
Glyma.16G088900 Glycine max HOM05D008622 ORTHO05D010757 1.0e-25 119.8 76 76.3
CARHR281850 Cardamine hirsuta HOM05D008622 ORTHO05D010757 1.3e-25 119.4 65 87.7
CiPaw.06G085000 Carya illinoinensis HOM05D008622 ORTHO05D010757 1.7e-25 119.0 82 72.0
ATCG00050 Arabidopsis thaliana HOM05D008622 ORTHO05D010757 3.9e-25 117.9 79 75.9
MELO3C028501.2 Cucumis melo HOM05D008622 ORTHO05D010757 3.9e-25 117.9 60 93.3
Gohir.D06G105260 Gossypium hirsutum HOM05D008622 ORTHO05D010757 3.9e-25 117.9 61 90.2
Thhalv10028241m.g Eutrema salsugineum HOM05D008622 ORTHO05D010757 3.3e-24 114.8 69 81.2
Gorai.012G044100 Gossypium raimondii HOM05D008622 ORTHO05D010757 7.3e-24 113.6 58 93.1
HanXRQChr00c0496g0575161 Helianthus annuus HOM05D008622 ORTHO05D010757 8.1e-23 110.2 58 91.4
Migut.H01168 Erythranthe guttata HOM05D008622 ORTHO05D010757 2.3e-22 108.6 66 78.8
Thhalv10001859m.g Eutrema salsugineum HOM05D008622 ORTHO05D010757 6.4e-20 100.5 63 82.5
Glyma.15G248550 Glycine max HOM05D008622 ORTHO05D010757 7.1e-19 97.1 60 81.7
Gorai.003G055400 Gossypium raimondii HOM05D008622 ORTHO05D010757 1.6e-18 95.9 47 97.9
BolSC49t61205H Brassica oleracea HOM05D008622 ORTHO05D010757 2.7e-18 95.1 59 81.4
BolSC29t60522H Brassica oleracea HOM05D008622 ORTHO05D010757 1.0e-17 93.2 60 78.3
BolSC44t60843H Brassica oleracea HOM05D008622 ORTHO05D010757 3.9e-17 91.3 58 79.3
BolSC45t60884H Brassica oleracea HOM05D008622 ORTHO05D010757 3.9e-17 91.3 58 79.3
BolSC46t60979H Brassica oleracea HOM05D008622 ORTHO05D010757 3.9e-17 91.3 58 79.3
CiPaw.01G059700 Carya illinoinensis HOM05D008622 ORTHO05D010757 3.3e-16 88.2 60 71.7
Sed0025419 Sechium edule HOM05D008622 ORTHO05D010757 5.6e-16 87.4 77 61.0
Solyc02g011995.1 Solanum lycopersicum HOM05D008622 ORTHO05D010757 1.2e-15 86.3 52 80.8
Nitab4.5_0016174g0030 Nicotiana tabacum HOM05D001325 ORTHO05D001540 2.9e-12 75.1 60 63.3
ClCG00G002380 Citrullus lanatus HOM05D008622 ORTHO05D010757 3.8e-12 74.7 36 94.4
Nitab4.5_0004864g0050 Nicotiana tabacum HOM05D000540 ORTHO05D000681 2.4e-11 72.0 42 81.0
MCO08G152 Micromonas commoda HOM05D003175 ORTHO05D010757 4.1e-11 71.2 67 50.7
Cre12.g494450 Chlamydomonas reinhardtii HOM05D003175 ORTHO05D010757 2.1e-10 68.9 65 49.2
Nn4g25758 Nelumbo nucifera HOM05D008622 ORTHO05D010757 2.7e-10 68.6 39 82.1
Pp3c11_14140 Physcomitrium patens HOM05D003175 ORTHO05D003591 4.3e-08 61.2 78 42.3
Potri.013G128200 Populus trichocarpa HOM05D003175 ORTHO05D003591 4.3e-08 61.2 78 42.3
Sabra13G0107100 Salix brachista HOM05D003175 ORTHO05D003591 5.6e-08 60.8 76 43.4
Carub.0007s0566 Capsella rubella HOM05D003175 ORTHO05D003591 1.6e-07 59.3 76 39.5
AL7G16580 Arabidopsis lyrata HOM05D003175 ORTHO05D003591 2.1e-07 58.9 82 36.6
BcaNung00682 Brassica carinata HOM05D003175 ORTHO05D003591 2.1e-07 58.9 82 36.6
BcaNung04917 Brassica carinata HOM05D003175 ORTHO05D003591 2.1e-07 58.9 82 36.6
BcaNung04920 Brassica carinata HOM05D003175 ORTHO05D003591 2.1e-07 58.9 82 36.6
A01p03870 Brassica napus HOM05D003175 ORTHO05D003591 2.1e-07 58.9 82 36.6
C01p04180 Brassica napus HOM05D003175 ORTHO05D003591 2.1e-07 58.9 82 36.6
BolC1t00406H Brassica oleracea HOM05D003175 ORTHO05D003591 2.1e-07 58.9 82 36.6
BraA01t00374Z Brassica rapa HOM05D003175 ORTHO05D003591 2.1e-07 58.9 82 36.6
BraSC58t46475Z Brassica rapa HOM05D008622 ORTHO05D010757 2.1e-07 58.9 28 92.9
Manes.05G131300 Manihot esculenta HOM05D003175 ORTHO05D003591 2.1e-07 58.9 82 39.0
Aa31LG2G15900 Aethionema arabicum HOM05D003175 ORTHO05D003591 2.8e-07 58.5 74 41.9
AT4G34620 Arabidopsis thaliana HOM05D003175 ORTHO05D003591 6.2e-07 57.4 76 38.2
Thhalv10026606m.g Eutrema salsugineum HOM05D003175 ORTHO05D003591 3.1e-06 55.1 82 34.1
Sp7g32410 Schrenkiella parvula HOM05D003175 ORTHO05D003591 3.1e-06 55.1 82 34.1
SEGI_09210 Sequoiadendron giganteum HOM05D003175 ORTHO05D003591 5.2e-06 54.3 84 36.9
Lalb_Chr07g0180911 Lupinus albus HOM05D003175 ORTHO05D003591 6.9e-06 53.9 74 37.8
Pp3c1_7830 Physcomitrium patens HOM05D003175 ORTHO05D003591 6.9e-06 53.9 78 37.2
Aqoxy3G03231 Aquilegia oxysepala HOM05D003175 ORTHO05D003591 9.0e-06 53.5 66 42.4


User provided reference genes

Program Settings