Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.1Z049460 Gossypium hirsutum HOM05D001854 ORTHO05D001800 3.0e-93 345.1 170 100.0
COL.COLO4_14280 Corchorus olitorius HOM05D001854 ORTHO05D001800 4.2e-10 68.9 40 75.0
Thecc.03G172700 Theobroma cacao HOM05D001854 ORTHO05D001800 4.2e-10 68.9 40 75.0
Duzib084G0900 Durio zibethinus HOM05D001854 ORTHO05D001800 3.5e-09 65.9 40 72.5
Duzib068G1123 Durio zibethinus HOM05D001854 ORTHO05D001800 6.0e-09 65.1 40 72.5
Duzib205G1847 Durio zibethinus HOM05D001854 ORTHO05D001800 6.0e-09 65.1 40 70.0
Gohir.A08G101500 Gossypium hirsutum HOM05D001854 ORTHO05D001800 6.0e-09 65.1 28 100.0
Gohir.D08G112100 Gossypium hirsutum HOM05D001854 ORTHO05D001800 6.0e-09 65.1 28 100.0
Gorai.004G120500 Gossypium raimondii HOM05D001854 ORTHO05D001800 6.0e-09 65.1 28 100.0
Gohir.A12G259800 Gossypium hirsutum HOM05D001854 ORTHO05D001800 1.8e-08 63.5 40 72.5
Gohir.D12G260600 Gossypium hirsutum HOM05D001854 ORTHO05D001800 1.8e-08 63.5 40 72.5
Gorai.008G279200 Gossypium raimondii HOM05D001854 ORTHO05D001800 1.8e-08 63.5 40 72.5
Hund28404 Selenicereus undatus HOM05D001854 ORTHO05D001800 5.1e-08 62.0 56 51.8
Hund28407 Selenicereus undatus HOM05D001854 ORTHO05D001800 5.1e-08 62.0 56 51.8
PGR142G0980 Punica granatum HOM05D001854 ORTHO05D001800 6.7e-08 61.6 40 67.5
Hma1.2p1_0270F.1_g108280 Hydrangea macrophylla HOM05D001854 ORTHO05D001800 1.5e-07 60.5 40 62.5
Manes.06G145600 Manihot esculenta HOM05D001854 ORTHO05D001800 1.5e-07 60.5 40 65.0
Cpa.g.sc107.27 Carica papaya HOM05D001854 ORTHO05D001800 2.5e-07 59.7 40 62.5
TAR375G0318 Trochodendron aralioides HOM05D001854 ORTHO05D001800 2.5e-07 59.7 172 32.0
QL09p014672 Quercus lobata HOM05D001854 ORTHO05D001800 3.3e-07 59.3 39 64.1
GSVIVG01010599001 Vitis vinifera HOM05D001854 ORTHO05D001800 3.3e-07 59.3 40 65.0
Lj1C994G8 Lonicera japonica HOM05D001854 ORTHO05D001800 4.3e-07 58.9 39 64.1
Manes.14G027900 Manihot esculenta HOM05D001854 ORTHO05D001800 4.3e-07 58.9 40 62.5
Cc02_g03250 Coffea canephora HOM05D001854 ORTHO05D001800 5.6e-07 58.5 39 61.5
Dinv35194 Davidia involucrata HOM05D001854 ORTHO05D001800 5.6e-07 58.5 40 62.5
ECA233G4735 Erigeron canadensis HOM05D001854 ORTHO05D001800 5.6e-07 58.5 48 54.2
HanXRQChr13g0393721 Helianthus annuus HOM05D001854 ORTHO05D001800 5.6e-07 58.5 48 54.2
Nn1g01393 Nelumbo nucifera HOM05D001854 ORTHO05D001800 5.6e-07 58.5 40 62.5
MD01G1198300 Malus domestica HOM05D001854 ORTHO05D001800 7.4e-07 58.2 39 64.1
Aqoxy7G00411 Aquilegia oxysepala HOM05D001854 ORTHO05D001800 9.6e-07 57.8 153 30.1
TWI39G0696 Tripterygium wilfordii HOM05D001854 ORTHO05D001800 9.6e-07 57.8 40 60.0
CAN.G856.8 Capsicum annuum HOM05D001854 ORTHO05D001800 1.3e-06 57.4 40 60.0
Ciclev10004762m.g Citrus clementina HOM05D001854 ORTHO05D001800 1.3e-06 57.4 40 60.0
MD07G1266000 Malus domestica HOM05D001854 ORTHO05D001800 1.3e-06 57.4 39 61.5
Sopen03g004890 Solanum pennellii HOM05D001854 ORTHO05D001800 1.3e-06 57.4 40 60.0
PGSC0003DMG400014280 Solanum tuberosum HOM05D001854 ORTHO05D001800 1.3e-06 57.4 40 60.0
Ah.13g068420 Amaranthus hybridus HOM05D001854 ORTHO05D001800 1.6e-06 57.0 48 54.2
A10p29030 Brassica napus HOM05D001854 ORTHO05D001800 1.6e-06 57.0 48 52.1
C09p69390 Brassica napus HOM05D001854 ORTHO05D001800 1.6e-06 57.0 48 52.1
BolC9t59683H Brassica oleracea HOM05D001854 ORTHO05D001800 1.6e-06 57.0 48 52.1
BraA10t44951Z Brassica rapa HOM05D001854 ORTHO05D001800 1.6e-06 57.0 48 52.1
DCAR_020238 Daucus carota HOM05D001854 ORTHO05D001800 1.6e-06 57.0 40 60.0
Peaxi162Scf00915g00121 Petunia axillaris HOM05D001854 ORTHO05D001800 1.6e-06 57.0 40 57.5
Solyc03g026060.3 Solanum lycopersicum HOM05D001854 ORTHO05D001800 1.6e-06 57.0 40 57.5
TWI23G0052 Tripterygium wilfordii HOM05D001854 ORTHO05D001800 1.6e-06 57.0 40 60.0
MSTRG.27128 Avicennia marina HOM05D001854 ORTHO05D001800 2.1e-06 56.6 48 58.3
CSS0031976 Camellia sinensis var. sinensis HOM05D001854 ORTHO05D001800 2.1e-06 56.6 47 53.2
PSO478G1241 Papaver somniferum HOM05D001854 ORTHO05D001800 2.1e-06 56.6 39 59.0
PSO782G1535 Papaver somniferum HOM05D001854 ORTHO05D001800 2.1e-06 56.6 39 59.0
Rhsim03G0178700 Rhododendron simsii HOM05D001854 ORTHO05D001800 2.1e-06 56.6 40 60.0
AL6G17510 Arabidopsis lyrata HOM05D001854 ORTHO05D001800 2.8e-06 56.2 48 50.0
BcaC06g32456 Brassica carinata HOM05D001854 ORTHO05D001800 2.8e-06 56.2 48 50.0
Carub.0006s0623 Capsella rubella HOM05D001854 ORTHO05D001800 2.8e-06 56.2 48 50.0
CARHR205880 Cardamine hirsuta HOM05D001854 ORTHO05D001800 2.8e-06 56.2 48 50.0
FvH4_7g29140 Fragaria vesca HOM05D001854 ORTHO05D001800 2.8e-06 56.2 39 59.0
FAN01G0692 Fragaria x ananassa HOM05D001854 ORTHO05D001800 2.8e-06 56.2 39 59.0
FAN03G2097 Fragaria x ananassa HOM05D001854 ORTHO05D001800 2.8e-06 56.2 39 59.0
FAN06G0398 Fragaria x ananassa HOM05D001854 ORTHO05D001800 2.8e-06 56.2 39 59.0
FAN06G0744 Fragaria x ananassa HOM05D001854 ORTHO05D001800 2.8e-06 56.2 39 59.0
FAN10G0933 Fragaria x ananassa HOM05D001854 ORTHO05D001800 2.8e-06 56.2 39 59.0
Nn6g34212 Nelumbo nucifera HOM05D001854 ORTHO05D001800 2.8e-06 56.2 40 57.5
RcHm_v2.0_Chr1g0376931 Rosa chinensis HOM05D001854 ORTHO05D001800 2.8e-06 56.2 39 59.0
Sp6g35620 Schrenkiella parvula HOM05D001854 ORTHO05D001800 2.8e-06 56.2 48 50.0
CSS0020162 Camellia sinensis var. sinensis HOM05D001854 ORTHO05D001800 3.7e-06 55.8 40 60.0
CSS0048743 Camellia sinensis var. sinensis HOM05D001854 ORTHO05D001800 3.7e-06 55.8 40 60.0
CANSAT21G1772 Cannabis sativa HOM05D001854 ORTHO05D001800 3.7e-06 55.8 28 82.1
AUR62016011 Chenopodium quinoa HOM05D001854 ORTHO05D001800 3.7e-06 55.8 48 54.2
AUR62021218 Chenopodium quinoa HOM05D001854 ORTHO05D001800 3.7e-06 55.8 48 54.2
Haze_13738 Corylus avellana HOM05D001854 ORTHO05D001800 3.7e-06 55.8 39 61.5
Nitab4.5_0003870g0020 Nicotiana tabacum HOM05D001854 ORTHO05D001800 3.7e-06 55.8 39 59.0
Nitab4.5_0006040g0020 Nicotiana tabacum HOM05D001854 ORTHO05D001800 3.7e-06 55.8 39 59.0
SEGI_41157 Sequoiadendron giganteum HOM05D001854 ORTHO05D001800 3.7e-06 55.8 42 57.1
vmacro06703 Vaccinium macrocarpon HOM05D001854 ORTHO05D001800 3.7e-06 55.8 40 60.0
EL10Ac3g05716 Beta vulgaris HOM05D001854 ORTHO05D001800 4.8e-06 55.5 48 54.2
BcaC03g13184 Brassica carinata HOM05D001854 ORTHO05D001800 4.8e-06 55.5 39 59.0
C02p03060 Brassica napus HOM05D001854 ORTHO05D001800 4.8e-06 55.5 39 59.0
BolC2t06266H Brassica oleracea HOM05D001854 ORTHO05D001800 4.8e-06 55.5 39 59.0
CiPaw.04G066100 Carya illinoinensis HOM05D001854 ORTHO05D001800 4.8e-06 55.5 39 59.0
MSTRG.8752 Avicennia marina HOM05D001854 ORTHO05D001800 6.2e-06 55.1 46 56.5
Sabra15G0151900 Salix brachista HOM05D001854 ORTHO05D001800 6.2e-06 55.1 40 57.5
SalBow4G0409 Salvia bowleyana HOM05D001854 ORTHO05D001800 6.2e-06 55.1 39 61.5
BcaB05g21626 Brassica carinata HOM05D001854 ORTHO05D001800 8.1e-06 54.7 40 55.0
CSS0027493 Camellia sinensis var. sinensis HOM05D001854 ORTHO05D001800 8.1e-06 54.7 139 30.9
Thhalv10013287m.g Eutrema salsugineum HOM05D001854 ORTHO05D001800 8.1e-06 54.7 48 50.0
MBI04_g33644_MAGBIO Magnolia biondii HOM05D001854 ORTHO05D001800 8.1e-06 54.7 40 60.0
Potri.015G141400 Populus trichocarpa HOM05D001854 ORTHO05D001800 8.1e-06 54.7 40 57.5


User provided reference genes

Program Settings