Gene: Sopen03g004890

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g004890
  • Transcript Identifier Sopen03g004890.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 3651877-3657918 : negative

Gene Family Information

  • ID HOM05D001854
  • #Genes/#Species 354/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g004890.1

Descriptions

  • Description XB3 ortholog 3 in Arabidopsis thaliana (XBAT33) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: N-terminal protein myristoylation | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Ankyrin repeat-containing domain , Ankyrin repeat | BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT5G07270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT5G07270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036770 Ankyrin repeat-containing domain superfamily
IPR002110 Ankyrin repeat
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR020683 Ankyrin repeat-containing domain
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase