Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 1.0e-246 856.3 428 100.0
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 4.4e-226 787.7 412 95.4
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 2.9e-225 785.0 428 91.6
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 1.1e-221 773.1 428 90.4
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 4.1e-216 754.6 428 86.7
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 1.0e-214 750.0 428 86.2
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 2.3e-214 748.8 429 85.8
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 3.6e-212 741.5 422 86.0
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 9.9e-210 733.4 428 84.8
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 8.7e-198 693.7 428 81.3
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 9.0e-195 683.7 429 79.3
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 4.9e-193 677.9 427 78.0
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 4.9e-193 677.9 428 77.8
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.1e-192 676.8 430 77.0
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 1.9e-192 676.0 429 77.6
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 3.2e-192 675.2 428 78.0
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 1.2e-191 673.3 428 77.3
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 3.5e-191 671.8 429 76.9
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 6.0e-191 671.0 428 77.6
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 3.9e-190 668.3 434 76.0
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 3.3e-189 665.2 428 76.9
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 5.6e-189 664.5 434 75.8
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 3.7e-188 661.8 433 76.9
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 3.7e-188 661.8 431 75.6
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 1.4e-187 659.8 433 76.0
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 1.8e-187 659.4 433 75.8
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.8e-187 659.4 428 76.4
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 4.0e-187 658.3 426 75.8
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 6.9e-187 657.5 428 75.7
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 6.9e-187 657.5 428 76.2
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 4.5e-186 654.8 428 75.7
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.7e-185 652.9 427 75.6
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 7.1e-184 647.5 430 74.4
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 2.1e-183 646.0 459 70.2
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 7.9e-183 644.0 439 72.2
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 7.9e-183 644.0 431 73.3
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.9e-182 641.7 439 72.2
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 6.7e-182 641.0 428 72.7
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 8.7e-182 640.6 423 74.7
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 1.9e-181 639.4 428 72.9
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 2.5e-181 639.0 429 72.0
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 9.7e-181 637.1 435 72.4
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 1.6e-180 636.3 456 71.7
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 2.8e-180 635.6 422 74.2
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 2.8e-180 635.6 422 74.2
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 4.8e-180 634.8 430 71.4
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 3.1e-179 632.1 430 71.4
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 1.5e-178 629.8 426 72.5
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 1.0e-177 627.1 424 73.6
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 5.0e-177 624.8 431 71.2
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 1.4e-174 616.7 429 71.6
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 3.0e-174 615.5 421 71.3
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.1e-173 613.6 424 70.3
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.1e-173 613.6 424 72.2
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.9e-173 612.8 419 72.1
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 9.7e-173 610.5 429 70.9
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 9.7e-173 610.5 427 70.3
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 4.8e-172 608.2 434 71.0
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 8.2e-172 607.4 433 69.1
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 1.1e-171 607.1 422 70.4
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 1.1e-171 607.1 422 70.4
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.4e-171 605.9 422 70.9
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 2.4e-171 605.9 423 72.1
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 6.9e-171 604.4 422 70.9
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 4.5e-170 601.7 419 70.9
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 5.9e-170 601.3 419 70.9
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 7.7e-170 600.9 429 70.6
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 7.7e-170 600.9 429 70.6
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 1.0e-169 600.5 429 70.6
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 1.3e-169 600.1 419 70.9
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 2.9e-169 599.0 429 70.9
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 2.9e-169 599.0 419 70.6
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 5.0e-169 598.2 421 70.1
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 5.0e-169 598.2 421 70.5
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 6.5e-169 597.8 466 63.9
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 1.1e-168 597.0 421 70.3
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 1.4e-168 596.7 430 69.5
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 1.9e-168 596.3 421 70.3
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.9e-168 596.3 422 70.1
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 2.5e-168 595.9 442 67.6
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 3.2e-168 595.5 421 67.7
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 4.2e-168 595.1 422 70.1
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 1.6e-167 593.2 447 67.6
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 2.7e-167 592.4 421 69.1
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 4.7e-167 591.7 430 69.3
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 6.1e-167 591.3 431 68.0
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 7.9e-167 590.9 422 69.7
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 1.8e-166 589.7 433 65.6
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.9e-166 588.6 422 69.7
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 6.7e-166 587.8 432 68.5
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 6.7e-166 587.8 547 59.2
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.0e-165 586.3 422 69.4
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 1.7e-164 583.2 419 68.5
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 4.5e-162 575.1 424 66.5
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 6.1e-159 564.7 415 68.2
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 1.4e-158 563.5 427 64.2
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 2.2e-156 556.2 428 61.9
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 4.1e-155 552.0 419 66.6
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.0e-153 547.4 415 65.5
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 2.7e-151 539.3 420 63.8
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 6.3e-148 528.1 334 77.8
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 6.5e-145 518.1 428 60.0
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 3.1e-139 499.2 430 56.0
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 5.9e-138 495.0 428 59.1
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 2.6e-133 479.6 432 56.2
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 2.6e-133 479.6 428 60.5
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 4.9e-132 475.3 355 67.0
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 1.1e-128 464.2 298 74.5
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 2.5e-128 463.0 428 51.9
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 5.6e-128 461.8 435 58.2
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 6.1e-127 458.4 423 53.7
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.6e-122 443.7 354 64.1
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 3.4e-117 426.0 273 76.2
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.9e-115 420.2 425 47.5
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 1.1e-112 411.0 426 52.6
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 5.8e-109 398.7 263 76.0
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 3.9e-89 332.8 194 82.5
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 9.9e-85 318.2 430 43.5
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 1.9e-75 287.3 249 56.2
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 3.8e-68 263.1 291 50.2
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 2.1e-66 257.3 183 71.0
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 3.1e-46 190.3 137 72.3
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 2.0e-29 134.4 88 70.5
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 4.5e-29 133.3 100 61.0
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 2.2e-28 131.0 95 65.3
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 8.3e-23 112.5 85 60.0
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 1.7e-12 78.2 358 24.3
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 8.9e-09 65.9 88 44.3
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 1.7e-07 61.6 41 65.9


User provided reference genes

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