Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 2.1e-93 346.3 267 100.0
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 1.1e-84 317.4 268 96.3
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 7.1e-57 224.9 266 72.9
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 8.2e-53 211.5 267 68.2
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 1.3e-50 204.1 270 73.0
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 1.2e-48 197.6 266 48.9
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 7.9e-48 194.9 266 66.9
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 6.7e-47 191.8 283 63.3
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 1.9e-46 190.3 268 55.6
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 7.4e-46 188.3 282 62.8
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 1.3e-42 177.6 267 64.0
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 1.4e-41 174.1 282 66.0
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 4.2e-41 172.6 276 65.2
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 1.0e-39 167.9 281 58.0
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 1.5e-38 164.1 277 61.4
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.0e-38 163.7 274 62.0
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 4.8e-37 159.1 280 62.9
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 1.1e-36 157.9 274 61.3
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 2.4e-36 156.8 286 66.4
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 5.3e-36 155.6 277 51.3
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 1.2e-35 154.5 316 60.1
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 3.4e-35 152.9 256 68.0
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 1.3e-34 151.0 281 59.1
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 1.7e-34 150.6 282 58.9
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 2.9e-34 149.8 296 50.3
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 5.0e-34 149.1 297 51.5
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 5.0e-34 149.1 296 50.3
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 8.5e-34 148.3 276 57.2
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 4.2e-33 146.0 279 58.1
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 7.2e-33 145.2 276 60.5
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 7.2e-33 145.2 282 63.1
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 9.4e-33 144.8 282 63.1
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 3.6e-32 142.9 288 54.2
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 4.7e-32 142.5 279 56.6
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 1.4e-31 141.0 273 50.2
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 1.4e-31 141.0 277 56.7
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 8.8e-31 138.3 246 58.5
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 2.0e-30 137.1 274 60.2
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 3.3e-30 136.3 277 49.5
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 3.3e-30 136.3 277 62.1
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 7.4e-30 135.2 272 55.1
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 7.4e-30 135.2 282 52.8
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 1.3e-29 134.4 269 60.6
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 1.7e-29 134.0 272 58.5
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.7e-29 134.0 282 47.5
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 2.8e-29 133.3 274 62.0
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 2.8e-29 133.3 249 62.2
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.7e-29 132.9 282 47.5
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 3.7e-29 132.9 271 58.7
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 3.7e-29 132.9 271 58.7
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 6.3e-29 132.1 271 58.7
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 8.2e-29 131.7 278 53.2
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 1.1e-28 131.3 274 54.0
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 1.4e-28 131.0 276 62.0
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.4e-28 130.2 278 52.5
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 3.1e-28 129.8 248 66.1
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 5.3e-28 129.0 283 47.3
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 2.0e-27 127.1 275 56.7
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 2.0e-27 127.1 300 45.3
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 4.5e-27 125.9 273 56.0
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 4.5e-27 125.9 271 53.9
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 7.7e-27 125.2 276 60.9
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 1.0e-26 124.8 273 50.2
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 1.0e-26 124.8 274 55.5
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 1.0e-26 124.8 252 55.6
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 1.7e-26 124.0 288 55.9
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.7e-26 124.0 276 59.4
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 2.2e-26 123.6 273 60.1
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 5.0e-26 122.5 288 53.1
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 1.5e-25 120.9 288 54.9
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 5.5e-25 119.0 235 50.2
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 9.4e-25 118.2 283 59.7
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 1.2e-24 117.9 279 57.3
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 2.7e-24 116.7 286 52.4
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 1.8e-23 114.0 156 69.2
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 4.0e-23 112.8 252 42.5
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 1.5e-22 110.9 99 75.8
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 3.3e-22 109.8 308 46.8
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 5.7e-22 109.0 153 39.9
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 7.5e-22 108.6 270 58.9
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 7.5e-22 108.6 273 54.6
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 3.7e-21 106.3 182 63.7
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 4.8e-21 105.9 270 59.6
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 4.8e-21 105.9 216 59.3
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 6.3e-21 105.5 272 58.5
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 8.2e-21 105.1 275 54.2
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 3.1e-20 103.2 95 65.3
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 3.1e-20 103.2 296 46.6
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 3.1e-20 103.2 149 55.7
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 3.1e-20 103.2 149 51.7
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 3.1e-20 103.2 94 62.8
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 5.3e-20 102.4 97 63.9
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 5.3e-20 102.4 97 63.9
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 7.0e-20 102.1 103 66.0
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 7.0e-20 102.1 103 66.0
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 7.7e-19 98.6 281 58.7
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.1e-17 94.7 273 48.7
arahy.Tifrunner.gnm1.ann1.4PMG8D Arachis hypogaea HOM05D000368 ORTHO05D009348 2.5e-17 93.6 77 66.2
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 1.2e-16 91.3 96 65.6
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.6e-16 90.9 273 48.0
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 3.6e-16 89.7 279 46.6
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 2.6e-14 83.6 290 52.8
CBR_g18775 Chara braunii HOM05D000368 ORTHO05D009348 3.5e-11 73.2 97 52.6
arahy.Tifrunner.gnm1.ann1.QCHX4X Arachis hypogaea HOM05D000368 ORTHO05D009348 4.2e-09 66.2 54 64.8
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 4.2e-09 66.2 39 64.1
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 5.5e-09 65.9 39 74.4
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 2.7e-08 63.5 41 63.4
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 2.7e-08 63.5 42 59.5
Dinv28434 Davidia involucrata HOM05D000368 ORTHO05D000289 1.8e-07 60.8 57 54.4
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 4.0e-07 59.7 269 33.8
arahy.Tifrunner.gnm1.ann1.T7NAK5 Arachis hypogaea HOM05D015469 ORTHO05D009348 6.8e-07 58.9 78 41.0
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 1.2e-06 58.2 31 74.2


User provided reference genes

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