Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G106900 Glycine max HOM05D005442 ORTHO05D006450 2.4e-274 948.3 527 100.0
Glyma.10G282700 Glycine max HOM05D005442 ORTHO05D006450 8.7e-232 807.0 552 83.7
Phvul.007G018400 Phaseolus vulgaris HOM05D005442 ORTHO05D006450 1.2e-175 620.5 472 72.7
Psat6g232320 Pisum sativum HOM05D005442 ORTHO05D006450 7.1e-109 398.7 465 55.9
Lj5g0013939 Lotus japonicus HOM05D005442 ORTHO05D006450 5.6e-106 389.0 558 47.3
Ca_03302_v3 Cicer arietinum L. HOM05D005442 ORTHO05D006450 4.8e-105 386.0 462 51.1
VMungo0720G2182 Vigna mungo HOM05D005442 ORTHO05D006450 1.8e-96 357.5 367 61.3
Medtr1g112820 Medicago truncatula HOM05D005442 ORTHO05D002291 5.5e-93 345.9 372 55.1
Lalb_Chr06g0163701 Lupinus albus HOM05D005442 ORTHO05D006450 1.0e-91 341.7 566 43.6
arahy.Tifrunner.gnm1.ann1.WUXL4S Arachis hypogaea HOM05D005442 ORTHO05D006450 1.3e-91 341.3 468 49.8
arahy.Tifrunner.gnm1.ann1.ZGQ44R Arachis hypogaea HOM05D005442 ORTHO05D006450 1.1e-90 338.2 468 49.8
GSVIVG01023996001 Vitis vinifera HOM05D005442 ORTHO05D006450 8.5e-78 295.4 533 41.7
TPR.G2470 Trifolium pratense HOM05D005442 ORTHO05D006450 1.6e-76 291.2 414 43.2
Dinv41924 Davidia involucrata HOM05D005442 ORTHO05D006450 2.5e-69 267.3 519 39.9
QL11p051413 Quercus lobata HOM05D005442 ORTHO05D006450 9.4e-69 265.4 511 40.9
CSS0044298 Camellia sinensis var. sinensis HOM05D005442 ORTHO05D006450 1.5e-66 258.1 486 39.7
vmacro17319 Vaccinium macrocarpon HOM05D005442 ORTHO05D006450 4.4e-66 256.5 303 51.5
CiPaw.05G084400 Carya illinoinensis HOM05D005442 ORTHO05D006450 3.7e-65 253.4 501 40.7
Atru.chr5.3384 Acer truncatum HOM05D005442 ORTHO05D006450 2.4e-64 250.8 301 50.8
MD05G1123900 Malus domestica HOM05D005442 ORTHO05D006450 7.0e-64 249.2 486 39.5
ClCG02G012030 Citrullus lanatus HOM05D005442 ORTHO05D006450 2.6e-63 247.3 492 40.2
TWI31G1375 Tripterygium wilfordii HOM05D005442 ORTHO05D006450 2.9e-62 243.8 482 40.9
TAR376G0424 Trochodendron aralioides HOM05D005442 ORTHO05D006450 8.5e-62 242.3 329 48.6
TAR369G0572 Trochodendron aralioides HOM05D005442 ORTHO05D006450 2.5e-61 240.7 327 47.4
Actinidia21468 Actinidia chinensis HOM05D005442 ORTHO05D006450 4.2e-61 240.0 331 47.1
Haze_13370 Corylus avellana HOM05D005442 ORTHO05D006450 9.4e-61 238.8 543 37.8
Hund06446 Selenicereus undatus HOM05D005442 ORTHO05D006450 1.6e-60 238.0 358 44.4
CANSAT56G0103 Cannabis sativa HOM05D005442 ORTHO05D006450 2.1e-60 237.7 351 45.3
Thecc.02G056900 Theobroma cacao HOM05D005442 ORTHO05D006450 6.1e-60 236.1 495 37.0
Ciclev10028168m.g Citrus clementina HOM05D005442 ORTHO05D006450 8.0e-60 235.7 504 38.7
MELO3C020828.2 Cucumis melo HOM05D005442 ORTHO05D006450 8.0e-60 235.7 301 48.2
Sed0001500 Sechium edule HOM05D005442 ORTHO05D006450 1.0e-59 235.3 494 38.7
CsaV3_2G016200 Cucumis sativus L. HOM05D005442 ORTHO05D006450 2.3e-59 234.2 311 46.9
Eucgr.I01451 Eucalyptus grandis HOM05D005442 ORTHO05D006450 2.3e-59 234.2 479 38.2
Actinidia39159 Actinidia chinensis HOM05D005442 ORTHO05D006450 3.0e-59 233.8 508 37.6
Cpa.g.sc20.103 Carica papaya HOM05D005442 ORTHO05D006450 4.8e-57 226.5 507 38.9
Gohir.D02G227000 Gossypium hirsutum HOM05D005442 ORTHO05D006450 8.3e-57 225.7 352 40.3
Gorai.005G254900 Gossypium raimondii HOM05D005442 ORTHO05D006450 1.4e-56 224.9 352 40.1
Sc08g0002780 Simmondsia chinensis HOM05D005442 ORTHO05D006450 1.8e-56 224.6 489 36.6
Gohir.A03G205700 Gossypium hirsutum HOM05D005442 ORTHO05D006450 4.1e-56 223.4 352 40.1
Nn1g06499 Nelumbo nucifera HOM05D005442 ORTHO05D006450 9.1e-56 222.2 269 51.7
Lsat_1_v5_gn_6_13820 Lactuca sativa HOM05D005442 ORTHO05D006450 1.2e-55 221.9 356 41.3
Sabra09G0106500 Salix brachista HOM05D005442 ORTHO05D006450 7.7e-55 219.2 514 36.4
Solyc01g111720.4 Solanum lycopersicum HOM05D005442 ORTHO05D006450 2.5e-53 214.2 477 35.2
Sopen01g053760 Solanum pennellii HOM05D005442 ORTHO05D006450 5.5e-53 213.0 477 35.0
Manes.01G140900 Manihot esculenta HOM05D005442 ORTHO05D006450 2.7e-52 210.7 501 36.3
Duzib132G0277 Durio zibethinus HOM05D005442 ORTHO05D006450 3.6e-52 210.3 309 44.0
MBI11_g07617_MAGBIO Magnolia biondii HOM05D005442 ORTHO05D006450 8.0e-52 209.1 308 45.1
PGR142G2067 Punica granatum HOM05D005442 ORTHO05D006450 8.0e-52 209.1 474 35.4
EL10Ac9g21351 Beta vulgaris HOM05D005442 ORTHO05D006450 1.4e-51 208.4 489 35.4
DCAR_011887 Daucus carota HOM05D005442 ORTHO05D006450 2.3e-51 207.6 324 41.0
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 5.2e-51 206.5 206 55.3
CDE02G3112 Ceratophyllum demersum HOM05D005442 ORTHO05D006450 5.2e-51 206.5 248 50.0
CDE04G0468 Ceratophyllum demersum HOM05D005442 ORTHO05D000996 5.2e-51 206.5 254 48.8
PGSC0003DMG400006166 Solanum tuberosum HOM05D005442 ORTHO05D006450 1.2e-50 205.3 470 34.5
AUR62010020 Chenopodium quinoa HOM05D005442 ORTHO05D006450 3.4e-50 203.8 307 43.0
COL.COLO4_17367 Corchorus olitorius HOM05D005442 ORTHO05D006450 7.5e-50 202.6 309 43.4
Aqoxy6G02079 Aquilegia oxysepala HOM05D005442 ORTHO05D006450 8.3e-49 199.1 325 40.3
AUR62013010 Chenopodium quinoa HOM05D005442 ORTHO05D006450 1.1e-48 198.7 230 51.3
PSO541G1416 Papaver somniferum HOM05D005442 ORTHO05D006450 1.4e-48 198.4 510 34.3
MSTRG.16924 Avicennia marina HOM05D005442 ORTHO05D006450 7.0e-48 196.1 423 39.5
FAN15G0807 Fragaria x ananassa HOM05D005442 ORTHO05D006450 9.2e-48 195.7 264 46.2
PSO675G1865 Papaver somniferum HOM05D005442 ORTHO05D006450 2.0e-47 194.5 493 36.5
Peaxi162Scf00362g00530 Petunia axillaris HOM05D005442 ORTHO05D006450 2.7e-47 194.1 479 34.4
FvH4_2g15550 Fragaria vesca HOM05D005442 ORTHO05D006450 3.5e-47 193.7 286 44.1
FAN24G2500 Fragaria x ananassa HOM05D005442 ORTHO05D006450 4.5e-47 193.4 286 44.1
Migut.B00066 Erythranthe guttata HOM05D005442 ORTHO05D006450 1.3e-46 191.8 349 41.8
FAN27G2972 Fragaria x ananassa HOM05D005442 ORTHO05D006450 1.7e-46 191.4 264 45.5
ATR0763G134 Amborella trichopoda HOM05D005442 ORTHO05D006450 2.9e-46 190.7 256 46.9
unitig_744.g24278 Utricularia gibba HOM05D005442 ORTHO05D006450 6.6e-46 189.5 272 45.2
Cc09_g09800 Coffea canephora HOM05D005442 ORTHO05D006450 8.6e-46 189.1 460 34.3
SGA_v2.0_scaffold58G20356 Striga asiatica HOM05D002097 ORTHO05D002248 1.1e-45 188.7 287 42.2
SalBow1G0486 Salvia bowleyana HOM05D005442 ORTHO05D006450 7.3e-45 186.0 371 39.6
Prupe.8G167900 Prunus persica HOM05D005442 ORTHO05D006450 2.8e-44 184.1 490 34.5
THA.LOC104807379 Tarenaya hassleriana HOM05D005442 ORTHO05D006450 2.8e-44 184.1 308 42.2
ECA233G3196 Erigeron canadensis HOM05D005442 ORTHO05D006450 4.7e-44 183.3 419 35.8
HPP92_022180 Vanilla planifolia HOM05D005442 ORTHO05D006450 1.4e-43 181.8 310 41.9
HPP92_022198 Vanilla planifolia HOM05D005442 ORTHO05D006450 1.4e-43 181.8 310 42.3
FAN20G2789 Fragaria x ananassa HOM05D005442 ORTHO05D006450 5.2e-43 179.9 264 43.9
RcHm_v2.0_Chr6g0278721 Rosa chinensis HOM05D005442 ORTHO05D006450 1.2e-42 178.7 519 32.4
Aa31LG8G14120 Aethionema arabicum HOM05D005442 ORTHO05D006450 2.0e-42 177.9 403 38.7
Os02g0101100 Oryza sativa ssp. japonica HOM05D005442 ORTHO05D006450 2.0e-42 177.9 294 41.2
Zm00001eb134390 Zea mays HOM05D005442 ORTHO05D006450 2.6e-42 177.6 450 35.6
Actinidia32035 Actinidia chinensis HOM05D005442 ORTHO05D006450 7.5e-42 176.0 475 33.5
AT1G34360 Arabidopsis thaliana HOM05D005442 ORTHO05D006450 2.0e-39 167.9 311 40.2
Thhalv10022629m.g Eutrema salsugineum HOM05D005442 ORTHO05D006450 3.5e-39 167.2 297 42.1
A07p04140 Brassica napus HOM05D005442 ORTHO05D006450 5.9e-39 166.4 263 44.1
BraA07t28205Z Brassica rapa HOM05D005442 ORTHO05D006450 7.8e-39 166.0 263 44.1
Sp3g30220 Schrenkiella parvula HOM05D005442 ORTHO05D006450 1.0e-38 165.6 263 44.9
BcaC06g36199 Brassica carinata HOM05D005442 ORTHO05D006450 3.0e-38 164.1 263 43.3
C07p06570 Brassica napus HOM05D005442 ORTHO05D006450 3.0e-38 164.1 263 43.3
BolC7t41079H Brassica oleracea HOM05D005442 ORTHO05D006450 3.0e-38 164.1 263 43.3
CARHR033820 Cardamine hirsuta HOM05D005442 ORTHO05D006450 5.0e-38 163.3 305 39.7
Carub.0001s3251 Capsella rubella HOM05D005442 ORTHO05D006450 1.1e-37 162.2 314 38.2
BcaB03g16428 Brassica carinata HOM05D005442 ORTHO05D006450 2.5e-37 161.0 307 42.0
Ah.01g023170 Amaranthus hybridus HOM05D005442 ORTHO05D006450 4.3e-37 160.2 526 31.0
AL1G48920 Arabidopsis lyrata HOM05D005442 ORTHO05D006450 1.2e-36 158.7 389 35.2
Lj5A177G53 Lonicera japonica HOM05D005442 ORTHO05D006450 2.0e-34 151.4 177 50.3
Atru.chr3.3284 Acer truncatum HOM05D005442 ORTHO05D006450 1.9e-32 144.8 209 44.5
Mapoly0037s0141 Marchantia polymorpha HOM05D005442 ORTHO05D006450 7.8e-31 139.4 199 43.2
Rhsim05G0053500 Rhododendron simsii HOM05D005442 ORTHO05D006450 2.3e-30 137.9 369 36.0
Oeu015514.1 Olea europaea HOM05D005442 ORTHO05D006450 1.2e-28 132.1 153 47.7
HanXRQChr08g0227271 Helianthus annuus HOM05D005442 ORTHO05D006450 2.6e-26 124.4 346 33.8
Pp3c27_2790 Physcomitrium patens HOM05D005442 ORTHO05D006450 1.7e-25 121.7 216 37.5
HPP92_028071 Vanilla planifolia HOM05D005442 ORTHO05D006450 2.9e-25 120.9 206 43.2
TWI79G1761 Tripterygium wilfordii HOM05D005442 ORTHO05D006450 1.2e-23 115.5 219 39.3
Pp3c16_14950 Physcomitrium patens HOM05D005442 ORTHO05D006450 2.7e-23 114.4 203 37.9
Lj5A177G54 Lonicera japonica HOM05D005442 ORTHO05D006450 8.6e-22 109.4 190 42.6
CAN.G588.93 Capsicum annuum HOM05D005442 ORTHO05D006450 4.3e-21 107.1 176 40.3
AagrBONN_evm.TU.Sc2ySwM_344.3952 Anthoceros agrestis HOM05D005442 ORTHO05D006450 4.0e-19 100.5 156 39.7
Cfa023336 Carpinus fangiana HOM05D005442 ORTHO05D006450 8.9e-19 99.4 125 47.2
Potri.009G137000 Populus trichocarpa HOM05D005442 ORTHO05D006450 9.9e-18 95.9 276 33.0
Medtr1g112830 Medicago truncatula HOM05D002026 ORTHO05D002291 6.4e-17 93.2 124 43.5
Cc02_g27640 Coffea canephora HOM05D005442 ORTHO05D006450 8.4e-17 92.8 326 30.7
C03p57670 Brassica napus HOM05D005442 ORTHO05D006450 1.9e-16 91.7 114 50.0
SMO171G0119 Selaginella moellendorffii HOM05D005442 ORTHO05D006450 2.4e-16 91.3 196 33.2
Rhsim05G0053300 Rhododendron simsii HOM05D005442 ORTHO05D006450 4.1e-16 90.5 124 46.0
BcaC01g02969 Brassica carinata HOM05D005442 ORTHO05D006450 1.2e-15 89.0 107 51.4
SHI05769 Sapria himalayana HOM05D005442 ORTHO05D006450 3.5e-15 87.4 361 29.4
BolC3t18042H Brassica oleracea HOM05D005442 ORTHO05D013811 6.0e-15 86.7 107 52.3
CBR_g29438 Chara braunii HOM05D005442 ORTHO05D006450 3.0e-14 84.3 186 34.4
C03p57690 Brassica napus HOM05D005442 ORTHO05D013811 2.5e-13 81.3 123 44.7
MCO13G079 Micromonas commoda HOM05D005442 ORTHO05D006450 7.3e-13 79.7 203 29.1
MD10G1126600 Malus domestica HOM05D005442 ORTHO05D006450 1.1e-11 75.9 78 53.8
Pp3c14_5800 Physcomitrium patens HOM05D004690 ORTHO05D005527 1.8e-11 75.1 214 30.4
Pp3c2_19940 Physcomitrium patens HOM05D004690 ORTHO05D005527 6.8e-11 73.2 216 30.1
Oeu032532.1 Olea europaea HOM05D005442 ORTHO05D006450 4.4e-10 70.5 163 37.4
VMungo1383G3291 Vigna mungo HOM05D005442 ORTHO05D006450 5.8e-10 70.1 74 59.5
BolC3t18043H Brassica oleracea HOM05D008551 ORTHO05D006450 1.7e-09 68.6 73 53.4
Rhsim09G0155200 Rhododendron simsii HOM05D005442 ORTHO05D006450 2.2e-09 68.2 65 49.2
SMO353G0310 Selaginella moellendorffii HOM05D004690 ORTHO05D005527 2.2e-09 68.2 129 33.3
Mapoly0090s0068 Marchantia polymorpha HOM05D004690 ORTHO05D005527 1.1e-08 65.9 191 29.8
CBR_g7972 Chara braunii HOM05D004690 ORTHO05D005527 3.2e-08 64.3 197 30.5
Sed0014938 Sechium edule HOM05D004690 ORTHO05D005527 9.3e-08 62.8 197 27.4
SEGI_12526 Sequoiadendron giganteum HOM05D005442 ORTHO05D006450 1.2e-07 62.4 45 62.2
COL.COLO4_23958 Corchorus olitorius HOM05D004690 ORTHO05D005527 1.6e-07 62.0 195 27.7
Sed0017216 Sechium edule HOM05D004690 ORTHO05D005527 1.6e-07 62.0 229 24.5
THA.LOC104803547 Tarenaya hassleriana HOM05D004690 ORTHO05D005527 2.1e-07 61.6 153 31.4
CsaV3_2G007620 Cucumis sativus L. HOM05D004690 ORTHO05D005527 2.7e-07 61.2 183 27.9
AagrBONN_evm.TU.Sc2ySwM_228.3886 Anthoceros agrestis HOM05D004690 ORTHO05D005527 3.5e-07 60.8 177 28.2
Manes.14G143400 Manihot esculenta HOM05D004690 ORTHO05D005527 6.0e-07 60.1 206 26.2
BcaC01g02968 Brassica carinata HOM05D005442 ORTHO05D006450 1.3e-06 58.9 75 46.7
Potri.018G104000 Populus trichocarpa HOM05D004690 ORTHO05D005527 1.3e-06 58.9 185 28.6
DCAR_017916 Daucus carota HOM05D004690 ORTHO05D005527 1.7e-06 58.5 134 29.9
ECA236G1766 Erigeron canadensis HOM05D004690 ORTHO05D005527 2.3e-06 58.2 200 28.0
Ciclev10009165m.g Citrus clementina HOM05D004690 ORTHO05D005527 3.0e-06 57.8 154 28.6
GSVIVG01023642001 Vitis vinifera HOM05D004690 ORTHO05D005527 3.0e-06 57.8 177 24.3
Cfa021053 Carpinus fangiana HOM05D004690 ORTHO05D005527 3.9e-06 57.4 164 28.7
Hma1.2p1_0028F.1_g017650 Hydrangea macrophylla HOM05D004690 ORTHO05D005527 3.9e-06 57.4 138 31.2
Cfa020803 Carpinus fangiana HOM05D004690 ORTHO05D005527 8.7e-06 56.2 194 25.8
Nn2g12436 Nelumbo nucifera HOM05D004690 ORTHO05D005527 8.7e-06 56.2 184 23.9
Solyc07g005830.3 Solanum lycopersicum HOM05D004690 ORTHO05D005527 8.7e-06 56.2 137 32.8
Sopen07g001930 Solanum pennellii HOM05D004690 ORTHO05D005527 8.7e-06 56.2 137 32.8
PGSC0003DMG400011147 Solanum tuberosum HOM05D004690 ORTHO05D005527 8.7e-06 56.2 137 32.8


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