Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G140900 Glycine max HOM05D002311 ORTHO05D213144 3.6e-42 174.5 86 100.0
Dinv02132 Davidia involucrata HOM05D002311 ORTHO05D006529 9.8e-08 60.1 54 59.3
arahy.Tifrunner.gnm1.ann1.105TUT Arachis hypogaea HOM05D002311 ORTHO05D006529 2.8e-07 58.5 54 57.4
arahy.Tifrunner.gnm1.ann1.8CY9VM Arachis hypogaea HOM05D002311 ORTHO05D006529 2.8e-07 58.5 54 57.4
VMungo0720G2980 Vigna mungo HOM05D002311 ORTHO05D006529 2.8e-07 58.5 54 57.4
QL07p021004 Quercus lobata HOM05D002311 ORTHO05D006529 3.7e-07 58.2 54 55.6
GSVIVG01033307001 Vitis vinifera HOM05D002311 ORTHO05D006529 4.9e-07 57.8 54 57.4
Actinidia09344 Actinidia chinensis HOM05D002311 ORTHO05D006529 6.3e-07 57.4 54 55.6
Actinidia24530 Actinidia chinensis HOM05D002311 ORTHO05D006529 6.3e-07 57.4 54 55.6
Duzib128G1675 Durio zibethinus HOM05D002311 ORTHO05D006529 6.3e-07 57.4 54 55.6
Glyma.10G103000 Glycine max HOM05D002311 ORTHO05D006529 6.3e-07 57.4 54 55.6
Nn2g15345 Nelumbo nucifera HOM05D002311 ORTHO05D006529 6.3e-07 57.4 49 61.2
Thecc.05G159000 Theobroma cacao HOM05D002311 ORTHO05D006529 6.3e-07 57.4 54 55.6
TAR633G2547 Trochodendron aralioides HOM05D002311 ORTHO05D006529 6.3e-07 57.4 49 61.2
Cc06_g16900 Coffea canephora HOM05D002311 ORTHO05D006529 1.1e-06 56.6 54 55.6
Glyma.02G182800 Glycine max HOM05D002311 ORTHO05D006529 1.1e-06 56.6 54 55.6
Aqoxy1G00286 Aquilegia oxysepala HOM05D002311 ORTHO05D006529 1.4e-06 56.2 54 55.6
Oeu033788.1 Olea europaea HOM05D000059 ORTHO05D006529 1.4e-06 56.2 54 55.6
THA.LOC104809892 Tarenaya hassleriana HOM05D002311 ORTHO05D006529 1.4e-06 56.2 54 53.7
TPR.G29378 Trifolium pratense HOM05D002311 ORTHO05D006529 1.4e-06 56.2 63 46.0
TPR.G21409 Trifolium pratense HOM05D002311 ORTHO05D006529 1.8e-06 55.8 54 53.7
Ca_26710_v3 Cicer arietinum L. HOM05D002311 ORTHO05D006529 2.4e-06 55.5 49 59.2
Eucgr.A02376 Eucalyptus grandis HOM05D002311 ORTHO05D006529 2.4e-06 55.5 54 51.9
Manes.08G049400 Manihot esculenta HOM05D002311 ORTHO05D006529 2.4e-06 55.5 54 53.7
Peaxi162Scf00493g00318 Petunia axillaris HOM05D002311 ORTHO05D006529 2.4e-06 55.5 54 53.7
CSS0029721 Camellia sinensis var. sinensis HOM05D002311 ORTHO05D006529 3.1e-06 55.1 54 53.7
CiPaw.10G032100 Carya illinoinensis HOM05D002311 ORTHO05D006529 3.1e-06 55.1 54 55.6
CsaV3_3G039710 Cucumis sativus L. HOM05D002311 ORTHO05D006529 3.1e-06 55.1 54 53.7
PGR004G1010 Punica granatum HOM05D002311 ORTHO05D006529 3.1e-06 55.1 54 53.7
MELO3C009713.2 Cucumis melo HOM05D002311 ORTHO05D006529 4.1e-06 54.7 54 53.7
Gohir.A02G111502 Gossypium hirsutum HOM05D002311 ORTHO05D006529 5.4e-06 54.3 54 53.7
Gohir.D03G067600 Gossypium hirsutum HOM05D002311 ORTHO05D006529 5.4e-06 54.3 54 53.7
Medtr1g052535 Medicago truncatula HOM05D002311 ORTHO05D006529 5.4e-06 54.3 54 53.7
Rhsim03G0018300 Rhododendron simsii HOM05D002311 ORTHO05D006529 5.4e-06 54.3 50 52.0
Solyc03g058190.3 Solanum lycopersicum HOM05D002311 ORTHO05D006529 5.4e-06 54.3 54 50.0
Sopen03g011790 Solanum pennellii HOM05D002311 ORTHO05D006529 5.4e-06 54.3 54 50.0
EL10Ac3g07067 Beta vulgaris HOM05D002311 ORTHO05D006529 7.0e-06 53.9 54 51.9
AUR62026021 Chenopodium quinoa HOM05D002311 ORTHO05D006529 7.0e-06 53.9 54 51.9
COL.COLO4_28209 Corchorus olitorius HOM05D002311 ORTHO05D006529 7.0e-06 53.9 59 49.2
MD12G1072500 Malus domestica HOM05D002311 ORTHO05D006529 7.0e-06 53.9 54 51.9
Phvul.007G253400 Phaseolus vulgaris HOM05D002311 ORTHO05D006529 7.0e-06 53.9 54 55.6
Psat6g127960 Pisum sativum HOM05D002311 ORTHO05D006529 7.0e-06 53.9 54 53.7
Potri.006G053000 Populus trichocarpa HOM05D002311 ORTHO05D006529 7.0e-06 53.9 54 50.0
ATR0332G021 Amborella trichopoda HOM05D002311 ORTHO05D006529 9.2e-06 53.5 54 50.0
CANSAT80G2788 Cannabis sativa HOM05D002311 ORTHO05D006529 9.2e-06 53.5 54 57.4
CAN.G233.11 Capsicum annuum HOM05D002311 ORTHO05D006529 9.2e-06 53.5 54 50.0
Sc13g0001860 Simmondsia chinensis HOM05D002311 ORTHO05D006529 9.2e-06 53.5 49 55.1


User provided reference genes

Program Settings