Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G120051 Glycine max HOM05D001437 ORTHO05D001297 1.4e-162 576.2 292 100.0
Glyma.03G006000 Glycine max HOM05D001437 ORTHO05D001297 1.5e-95 353.6 329 64.7
Glyma.05G088000 Glycine max HOM05D001437 ORTHO05D001297 3.6e-62 242.7 359 47.4
Glyma.19G067400 Glycine max HOM05D001437 ORTHO05D001297 4.0e-61 239.2 365 45.5
Lj2g0022086 Lotus japonicus HOM05D001437 ORTHO05D001297 5.2e-61 238.8 371 45.3
Ca_04457_v3 Cicer arietinum L. HOM05D001437 ORTHO05D001297 1.5e-60 237.3 356 46.9
Phvul.004G052500 Phaseolus vulgaris HOM05D001437 ORTHO05D001297 1.6e-57 227.3 372 44.4
VMungo0464G1186 Vigna mungo HOM05D001437 ORTHO05D001297 2.3e-56 223.4 372 43.3
TPR.G33939 Trifolium pratense HOM05D001437 ORTHO05D001297 5.2e-53 212.2 259 55.6
arahy.Tifrunner.gnm1.ann1.Y5LKUA Arachis hypogaea HOM05D001437 ORTHO05D001297 8.9e-53 211.5 268 51.1
arahy.Tifrunner.gnm1.ann1.61QI09 Arachis hypogaea HOM05D001437 ORTHO05D001297 3.8e-51 206.1 268 50.0
Medtr6g027300 Medicago truncatula HOM05D001437 ORTHO05D001297 9.2e-50 201.4 373 43.4
Lalb_Chr06g0174161 Lupinus albus HOM05D001437 ORTHO05D001297 1.3e-48 197.6 416 38.9
Lalb_Chr02g0157591 Lupinus albus HOM05D001437 ORTHO05D001297 1.1e-47 194.5 372 40.1
Psat1g088560 Pisum sativum HOM05D001437 ORTHO05D001297 6.2e-46 188.7 355 40.8
Thecc.05G237700 Theobroma cacao HOM05D001437 ORTHO05D001297 1.4e-29 134.4 336 33.6
Manes.09G135500 Manihot esculenta HOM05D001437 ORTHO05D001297 2.4e-29 133.7 348 33.3
ClCG10G016700 Citrullus lanatus HOM05D001437 ORTHO05D001297 1.3e-27 127.9 348 33.3
CsaV3_3G039660 Cucumis sativus L. HOM05D001437 ORTHO05D001297 6.4e-27 125.6 348 33.0
Eucgr.K01548 Eucalyptus grandis HOM05D001437 ORTHO05D001297 8.4e-27 125.2 336 33.0
MELO3C009707.2 Cucumis melo HOM05D001437 ORTHO05D001297 1.4e-26 124.4 348 32.5
Ciclev10030836m.g Citrus clementina HOM05D001437 ORTHO05D001297 4.2e-26 122.9 243 40.3
TWI34G1746 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 5.5e-26 122.5 346 32.1
RcHm_v2.0_Chr3g0495661 Rosa chinensis HOM05D001437 ORTHO05D001297 2.7e-25 120.2 358 32.1
TWI60G0413 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 2.7e-25 120.2 334 32.9
Manes.08G150600 Manihot esculenta HOM05D001437 ORTHO05D001297 2.3e-24 117.1 351 32.8
Sed0021010 Sechium edule HOM05D001437 ORTHO05D001297 6.7e-24 115.5 346 30.9
Hma1.2p1_0165F.1_g073400 Hydrangea macrophylla HOM05D001437 ORTHO05D001297 1.5e-23 114.4 351 30.5
Hma1.2p1_1215F.1_g267620 Hydrangea macrophylla HOM05D001437 ORTHO05D001297 1.5e-23 114.4 351 30.5
PGR142G2142 Punica granatum HOM05D001437 ORTHO05D001297 1.5e-23 114.4 363 33.3
Oeu044219.1 Olea europaea HOM05D001437 ORTHO05D001297 3.3e-23 113.2 331 31.1
Potri.013G068300 Populus trichocarpa HOM05D001437 ORTHO05D001297 2.8e-22 110.2 344 32.0
Dinv37037 Davidia involucrata HOM05D001437 ORTHO05D001297 3.7e-22 109.8 339 29.5
Atru.chr2.1577 Acer truncatum HOM05D001437 ORTHO05D001297 1.1e-21 108.2 337 30.9
Duzib106G0268 Durio zibethinus HOM05D001437 ORTHO05D001297 9.0e-21 105.1 353 29.5
Cpa.g.sc73.19 Carica papaya HOM05D001437 ORTHO05D001297 1.2e-20 104.8 294 33.0
COL.COLO4_38560 Corchorus olitorius HOM05D001437 ORTHO05D001297 1.5e-20 104.4 345 29.9
Nitab4.5_0000123g0070 Nicotiana tabacum HOM05D001437 ORTHO05D001297 2.6e-20 103.6 338 32.2
CSS0012476 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 7.6e-20 102.1 348 29.3
Peaxi162Scf00003g05391 Petunia axillaris HOM05D001437 ORTHO05D001297 1.0e-19 101.7 338 31.7
GSVIVG01029915001 Vitis vinifera HOM05D001437 ORTHO05D001297 1.7e-19 100.9 343 32.4
Rhsim03G0045400 Rhododendron simsii HOM05D001437 ORTHO05D001297 2.9e-19 100.1 266 33.8
FvH4_1g29630 Fragaria vesca HOM05D001437 ORTHO05D001297 3.8e-19 99.8 357 30.8
FAN19G0786 Fragaria x ananassa HOM05D001437 ORTHO05D001297 3.8e-19 99.8 268 36.2
AUR62036504 Chenopodium quinoa HOM05D001437 ORTHO05D001297 4.9e-19 99.4 273 32.6
vmacro07632 Vaccinium macrocarpon HOM05D001437 ORTHO05D001297 4.9e-19 99.4 279 34.4
Sabra13G0059600 Salix brachista HOM05D001437 ORTHO05D001297 8.4e-19 98.6 332 31.6
MD14G1011500 Malus domestica HOM05D001437 ORTHO05D001297 1.4e-18 97.8 334 32.0
CAN.G959.43 Capsicum annuum HOM05D001437 ORTHO05D001297 1.9e-18 97.4 339 31.0
MD12G1014100 Malus domestica HOM05D001437 ORTHO05D001297 2.5e-18 97.1 339 31.9
Prupe.7G026600 Prunus persica HOM05D001437 ORTHO05D001297 2.5e-18 97.1 337 32.9
CiPaw.10G124600 Carya illinoinensis HOM05D001437 ORTHO05D001297 4.2e-18 96.3 317 30.9
Duzib128G0706 Durio zibethinus HOM05D001437 ORTHO05D001297 4.2e-18 96.3 359 29.5
Psat6g222400 Pisum sativum HOM05D000417 ORTHO05D001297 7.1e-18 95.5 142 47.2
Cc00_g04900 Coffea canephora HOM05D001437 ORTHO05D001297 9.3e-18 95.1 272 33.8
MSTRG.6272 Avicennia marina HOM05D001437 ORTHO05D001297 1.2e-17 94.7 348 27.3
Gohir.A11G224206 Gossypium hirsutum HOM05D001437 ORTHO05D001297 1.6e-17 94.4 274 34.7
Nitab4.5_0007999g0030 Nicotiana tabacum HOM05D001437 ORTHO05D001297 1.6e-17 94.4 338 30.5
QL07p016401 Quercus lobata HOM05D001437 ORTHO05D001297 2.1e-17 94.0 262 32.1
Gorai.007G251300 Gossypium raimondii HOM05D001437 ORTHO05D001297 4.6e-17 92.8 266 34.2
CARHR008610 Cardamine hirsuta HOM05D001437 ORTHO05D001297 1.0e-16 91.7 244 34.8
PGSC0003DMG400007207 Solanum tuberosum HOM05D001437 ORTHO05D012702 1.0e-16 91.7 338 29.9
Gohir.D11G237800 Gossypium hirsutum HOM05D001437 ORTHO05D001297 1.8e-16 90.9 248 36.3
QL07p016355 Quercus lobata HOM05D001437 ORTHO05D001297 1.8e-16 90.9 180 39.4
Oeu023032.1 Olea europaea HOM05D001437 ORTHO05D001297 3.9e-16 89.7 321 28.7
AUR62037071 Chenopodium quinoa HOM05D001437 ORTHO05D001297 1.9e-15 87.4 259 32.0
Sp1g07340 Schrenkiella parvula HOM05D001437 ORTHO05D001297 2.5e-15 87.0 276 33.3
Nn2g14730 Nelumbo nucifera HOM05D001437 ORTHO05D001297 3.3e-15 86.7 333 28.8
AL1G19130 Arabidopsis lyrata HOM05D001437 ORTHO05D001297 4.3e-15 86.3 263 31.9
AT1G08680 Arabidopsis thaliana HOM05D001437 ORTHO05D001297 5.7e-15 85.9 236 30.9
Solyc10g076990.3 Solanum lycopersicum HOM05D001437 ORTHO05D001297 5.7e-15 85.9 342 29.2
Haze_20375 Corylus avellana HOM05D001437 ORTHO05D001297 7.4e-15 85.5 276 31.2
SalBow1G7355 Salvia bowleyana HOM05D001437 ORTHO05D001297 1.3e-14 84.7 342 29.8
EL10Ac8g19573 Beta vulgaris HOM05D001437 ORTHO05D001297 2.1e-14 84.0 305 32.1
THA.LOC104821335 Tarenaya hassleriana HOM05D001437 ORTHO05D001297 2.1e-14 84.0 269 30.9
Sopen10g028670 Solanum pennellii HOM05D001437 ORTHO05D001297 2.8e-14 83.6 342 29.5
BolC5t29437H Brassica oleracea HOM05D001437 ORTHO05D001297 3.7e-14 83.2 279 32.6
C05p06780 Brassica napus HOM05D001437 ORTHO05D001297 6.3e-14 82.4 285 32.3
BraA06t23772Z Brassica rapa HOM05D001437 ORTHO05D001297 6.3e-14 82.4 288 32.6
CANSAT78G1522 Cannabis sativa HOM05D001437 ORTHO05D001297 6.3e-14 82.4 348 26.7
Migut.K00184 Erythranthe guttata HOM05D001437 ORTHO05D001297 6.3e-14 82.4 317 27.1
Thhalv10007026m.g Eutrema salsugineum HOM05D001437 ORTHO05D001297 6.3e-14 82.4 258 30.6
SalBow1G0918 Salvia bowleyana HOM05D001437 ORTHO05D001297 8.2e-14 82.0 347 30.0
SalBow6G5163 Salvia bowleyana HOM05D001437 ORTHO05D001297 1.4e-13 81.3 344 28.8
A06p05630 Brassica napus HOM05D001437 ORTHO05D001297 3.1e-13 80.1 288 32.3
THA.LOC104823770 Tarenaya hassleriana HOM05D001437 ORTHO05D001297 3.1e-13 80.1 248 33.5
CSS0046561 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 4.1e-13 79.7 272 33.1
Carub.0001s0804 Capsella rubella HOM05D001437 ORTHO05D001297 5.3e-13 79.3 246 32.9
Aa31sc20G220 Aethionema arabicum HOM05D001437 ORTHO05D001297 6.9e-13 79.0 263 31.2
Ah.12g062060 Amaranthus hybridus HOM05D001437 ORTHO05D001297 2.0e-12 77.4 268 32.5
Actinidia37838 Actinidia chinensis HOM05D001437 ORTHO05D001297 7.6e-12 75.5 204 33.3
PSO541G0531 Papaver somniferum HOM05D001437 ORTHO05D001297 7.6e-12 75.5 341 28.4
PSO675G2600 Papaver somniferum HOM05D001437 ORTHO05D001297 1.0e-11 75.1 341 28.4
EL10Ac5g11660 Beta vulgaris HOM05D006642 ORTHO05D008856 2.9e-11 73.6 214 34.1
Gohir.D11G315300 Gossypium hirsutum HOM05D001437 ORTHO05D001297 1.4e-10 71.2 339 27.7
Gorai.007G346500 Gossypium raimondii HOM05D001437 ORTHO05D001297 1.4e-10 71.2 339 27.7
Psat6g222360 Pisum sativum HOM05D000417 ORTHO05D000342 1.4e-10 71.2 82 48.8
FAN26G2075 Fragaria x ananassa HOM05D001437 ORTHO05D001297 9.3e-10 68.6 265 32.1
Gohir.A11G300500 Gossypium hirsutum HOM05D001437 ORTHO05D001297 9.3e-10 68.6 356 27.8
MBI19_g30306_MAGBIO Magnolia biondii HOM05D001437 ORTHO05D001297 2.1e-09 67.4 271 26.6
BcaB07g34108 Brassica carinata HOM05D001437 ORTHO05D001297 2.7e-09 67.0 174 32.2
DCAR_013499 Daucus carota HOM05D001437 ORTHO05D001297 3.9e-08 63.2 202 30.7
SGA_v2.0_scaffold106G30577 Striga asiatica HOM05D001437 ORTHO05D001297 8.7e-08 62.0 293 28.0


User provided reference genes

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