Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G099100 Glycine max HOM05D007699 ORTHO05D009796 4.7e-51 204.1 97 100.0
Phvul.008G062500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.1e-15 86.7 61 70.5
Phvul.009G076400 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 7.9e-14 80.5 54 70.4
Medtr3g108610 Medicago truncatula HOM05D007699 ORTHO05D009796 3.3e-12 75.1 81 51.9
FAN08G2016 Fragaria x ananassa HOM05D007699 ORTHO05D009796 7.4e-12 73.9 52 69.2
QL03p053410 Quercus lobata HOM05D007699 ORTHO05D009796 7.4e-12 73.9 41 82.9
Potri.011G103401 Populus trichocarpa HOM05D007699 ORTHO05D009796 9.7e-12 73.6 42 78.6
TPR.G38695 Trifolium pratense HOM05D000020 ORTHO05D000543 1.6e-11 72.8 47 70.2
Phvul.001G084100 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 2.2e-11 72.4 43 76.7
FAN18G1871 Fragaria x ananassa HOM05D007699 ORTHO05D009796 2.8e-11 72.0 36 91.7
Gohir.A11G277350 Gossypium hirsutum HOM05D007699 ORTHO05D009796 3.7e-11 71.6 40 82.5
Phvul.001G066700 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 4.8e-11 71.2 49 67.3
TPR.G12299 Trifolium pratense HOM05D007699 ORTHO05D009796 6.3e-11 70.9 40 80.0
Gorai.011G262200 Gossypium raimondii HOM05D007699 ORTHO05D009796 1.1e-10 70.1 33 97.0
Hma1.2p1_0886F.1_g232660 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 1.1e-10 70.1 39 82.1
Hma1.2p1_0886F.1_g232685 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 1.1e-10 70.1 39 82.1
Carub.0003s1340 Capsella rubella HOM05D007699 ORTHO05D009796 1.4e-10 69.7 41 82.9
Medtr3g084270 Medicago truncatula HOM05D007699 ORTHO05D009796 1.4e-10 69.7 43 74.4
Medtr8g461450 Medicago truncatula HOM05D007699 ORTHO05D009796 1.4e-10 69.7 36 86.1
Potri.011G103301 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.4e-10 69.7 39 79.5
CSS0023756 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 1.8e-10 69.3 41 78.0
FAN11G3758 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.8e-10 69.3 31 100.0
A05p18230 Brassica napus HOM05D007699 ORTHO05D009796 2.4e-10 68.9 34 94.1
C03p91420 Brassica napus HOM05D007699 ORTHO05D009796 2.4e-10 68.9 34 94.1
Carub.0006s3371 Capsella rubella HOM05D007699 ORTHO05D009796 2.4e-10 68.9 31 100.0
CARHR185520 Cardamine hirsuta HOM05D007699 ORTHO05D009796 2.4e-10 68.9 31 100.0
Gohir.D06G068332 Gossypium hirsutum HOM05D007699 ORTHO05D009796 2.4e-10 68.9 39 76.9
Gorai.010G079800 Gossypium raimondii HOM05D007699 ORTHO05D009796 2.4e-10 68.9 39 76.9
Mapoly0086s0020 Marchantia polymorpha HOM05D007699 ORTHO05D009796 2.4e-10 68.9 39 82.1
Medtr3g105890 Medicago truncatula HOM05D007699 ORTHO05D009796 2.4e-10 68.9 34 91.2
Potri.005G055534 Populus trichocarpa HOM05D007699 ORTHO05D009796 2.4e-10 68.9 31 100.0
arahy.Tifrunner.gnm1.ann1.3C01L3 Arachis hypogaea HOM05D007699 ORTHO05D009796 3.1e-10 68.6 34 91.2
FAN08G0324 Fragaria x ananassa HOM05D007699 ORTHO05D009796 3.1e-10 68.6 34 91.2
Nitab4.5_0005352g0040 Nicotiana tabacum HOM05D007699 ORTHO05D009796 3.1e-10 68.6 37 83.8
Potri.005G055667 Populus trichocarpa HOM05D007699 ORTHO05D009796 3.1e-10 68.6 31 96.8
Thecc.10G037500 Theobroma cacao HOM05D007699 ORTHO05D009796 3.1e-10 68.6 31 96.8
arahy.Tifrunner.gnm1.ann1.3J1SD9 Arachis hypogaea HOM05D007699 ORTHO05D009796 4.1e-10 68.2 31 96.8
FvH4_3g13700 Fragaria vesca HOM05D007699 ORTHO05D009796 4.1e-10 68.2 31 96.8
FAN11G1327 Fragaria x ananassa HOM05D007699 ORTHO05D009796 4.1e-10 68.2 31 96.8
FAN18G1300 Fragaria x ananassa HOM05D005738 ORTHO05D007135 4.1e-10 68.2 34 91.2
FAN18G3749 Fragaria x ananassa HOM05D005738 ORTHO05D007135 4.1e-10 68.2 34 91.2
Prupe.7G080000 Prunus persica HOM05D007699 ORTHO05D009796 4.1e-10 68.2 31 96.8
CSS0021910 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 6.9e-10 67.4 30 100.0
CARHR088640 Cardamine hirsuta HOM05D007699 ORTHO05D009796 6.9e-10 67.4 30 100.0
Migut.J00839 Erythranthe guttata HOM05D007699 ORTHO05D009796 6.9e-10 67.4 30 100.0
FAN11G3494 Fragaria x ananassa HOM05D007699 ORTHO05D009796 6.9e-10 67.4 30 100.0
FAN13G3199 Fragaria x ananassa HOM05D007699 ORTHO05D009796 6.9e-10 67.4 30 100.0
Gorai.011G262800 Gossypium raimondii HOM05D007699 ORTHO05D009796 6.9e-10 67.4 30 100.0
Manes.11G145650 Manihot esculenta HOM05D007699 ORTHO05D009796 6.9e-10 67.4 30 100.0
Phvul.001G066900 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 6.9e-10 67.4 30 100.0
Prupe.7G069600 Prunus persica HOM05D007699 ORTHO05D009796 6.9e-10 67.4 30 100.0
Sopen12g028800 Solanum pennellii HOM05D007699 ORTHO05D009796 6.9e-10 67.4 30 100.0
PGSC0003DMG400029597 Solanum tuberosum HOM05D000312 ORTHO05D000221 6.9e-10 67.4 30 100.0
Mapoly0020s0143 Marchantia polymorpha HOM05D007699 ORTHO05D009796 9.0e-10 67.0 41 73.2
arahy.Tifrunner.gnm1.ann1.C3EWW9 Arachis hypogaea HOM05D007699 ORTHO05D009796 2.0e-09 65.9 31 93.5
EL10Ac6g13349 Beta vulgaris HOM05D007699 ORTHO05D009796 2.6e-09 65.5 38 84.2
TPR.G32688 Trifolium pratense HOM05D007699 ORTHO05D009796 2.6e-09 65.5 39 74.4
Phvul.001G090500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 4.5e-09 64.7 42 76.2
Solyc12g056290.2 Solanum lycopersicum HOM05D007699 ORTHO05D009796 5.9e-09 64.3 30 96.7
GSVIVG01037330001 Vitis vinifera HOM05D007699 ORTHO05D009796 1.3e-08 63.2 38 76.3
EL10Ac6g13624 Beta vulgaris HOM05D007699 ORTHO05D009796 1.7e-08 62.8 31 93.5
EL10Ac6g13625 Beta vulgaris HOM05D007699 ORTHO05D009796 1.7e-08 62.8 31 93.5
EL10Ac6g13683 Beta vulgaris HOM05D007699 ORTHO05D009796 1.7e-08 62.8 31 93.5
Ah.10g036850 Amaranthus hybridus HOM05D007699 ORTHO05D009796 2.2e-08 62.4 31 90.3
Pp3c15_10810 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.2e-08 62.4 38 76.3
Pp3c15_10813 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.2e-08 62.4 38 76.3
Pp3c15_10820 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.2e-08 62.4 38 76.3
Ciclev10018283m.g Citrus clementina HOM05D007699 ORTHO05D009796 2.9e-08 62.0 41 75.6
EL10Ac6g13684 Beta vulgaris HOM05D007699 ORTHO05D009796 5.0e-08 61.2 30 93.3
EL10Ac6g13685 Beta vulgaris HOM05D007699 ORTHO05D009796 5.0e-08 61.2 30 93.3
Pp3c10_15080 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-08 61.2 35 82.9
Pp3c10_15084 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-08 61.2 35 82.9
Pp3c1_6540 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-08 61.2 30 93.3
Pp3c24_6960 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-08 61.2 36 77.8
Pp3c24_6961 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-08 61.2 36 77.8
Pp3s1006_30 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-08 61.2 35 82.9
Pp3s638_22 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-08 61.2 35 82.9
Pp3s677_10 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-08 61.2 35 82.9
Pp3s677_11 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-08 61.2 35 82.9
Pp3s677_20 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-08 61.2 30 93.3
SHI29091 Sapria himalayana HOM05D007699 ORTHO05D009796 5.0e-08 61.2 30 93.3
EL10Ac6g13623 Beta vulgaris HOM05D007699 ORTHO05D009796 2.5e-07 58.9 26 100.0
Nn7g36904 Nelumbo nucifera HOM05D007699 ORTHO05D009796 2.5e-07 58.9 26 100.0
Pp3c1_26810 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.5e-07 58.9 26 100.0
Pp3c1_26830 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.5e-07 58.9 26 100.0
EL10Ac6g13621 Beta vulgaris HOM05D007699 ORTHO05D009796 4.2e-07 58.2 31 83.9
Medtr6g070990 Medicago truncatula HOM05D007699 ORTHO05D009796 7.2e-07 57.4 26 96.2
Pp3c21_2000 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.7e-06 55.5 30 83.3
Pp3c21_2022 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.7e-06 55.5 30 83.3
AT2G15530 Arabidopsis thaliana HOM05D000187 ORTHO05D000230 7.9e-06 53.9 40 70.0


User provided reference genes

Program Settings