Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G056032 Glycine max HOM05D000580 ORTHO05D006815 4.0e-07 56.6 32 100.0
AL2G20610 Arabidopsis lyrata HOM05D000580 ORTHO05D006815 6.9e-07 55.8 32 93.8
AL2G21660 Arabidopsis lyrata HOM05D000580 ORTHO05D006815 6.9e-07 55.8 32 93.8
ATCG00710 Arabidopsis thaliana HOM05D000580 ORTHO05D006815 6.9e-07 55.8 32 93.8
CARHR282200 Cardamine hirsuta HOM05D000580 ORTHO05D006815 6.9e-07 55.8 32 93.8
Gohir.A02G100500 Gossypium hirsutum HOM05D000580 ORTHO05D006815 6.9e-07 55.8 32 93.8
CSS0026029 Camellia sinensis var. sinensis HOM05D000580 ORTHO05D006815 9.0e-07 55.5 32 96.9
Gohir.A05G286600 Gossypium hirsutum HOM05D000580 ORTHO05D006815 9.0e-07 55.5 32 96.9
Lalb_Chr10g0093221 Lupinus albus HOM05D000580 ORTHO05D006815 9.0e-07 55.5 32 96.9
Lalb_Chr25g0283341 Lupinus albus HOM05D000580 ORTHO05D006815 9.0e-07 55.5 32 96.9
CAN.G131.5 Capsicum annuum HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
CAN.G1513.10 Capsicum annuum HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
DCAR_032514 Daucus carota HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
Eucgr.B01572 Eucalyptus grandis HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
Gohir.1Z078601 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
Gohir.A03G093700 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
Gohir.A09G043800 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
Gohir.A09G103075 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
Gohir.A09G103100 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
Gohir.A12G178620 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
Gohir.A12G178665 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
Gohir.D01G102060 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
Gorai.010G031500 Gossypium raimondii HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
Hma1.2p1_0218F.1_g092720 Hydrangea macrophylla HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
Hma1.2p1_2223F.1_g317406 Hydrangea macrophylla HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
LjContig00319g0006223 Lotus japonicus HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
LjContig00319g0024255 Lotus japonicus HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
SGA_v2.0_scaffold479G52254 Striga asiatica HOM05D000580 ORTHO05D006815 1.2e-06 55.1 32 93.8
BNapus_Darmor_BZH_scaffold_253p00300 Brassica napus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
BNapus_Darmor_BZH_scaffold_57p00040 Brassica napus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
C06p22890 Brassica napus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
C06p23100 Brassica napus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
BolSC29t60604H Brassica oleracea HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
BolSC35t60664H Brassica oleracea HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
BolSC35t60735H Brassica oleracea HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
BolSC46t61015H Brassica oleracea HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
BolSC47t61080H Brassica oleracea HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
BolSC49t61168H Brassica oleracea HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
BraA06t25380Z Brassica rapa HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
BraSC138t45558Z Brassica rapa HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
BraSC58t46498Z Brassica rapa HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
BraSC59t46576Z Brassica rapa HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
Carub.0006s2561 Capsella rubella HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
CAN.G1478.5 Capsicum annuum HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
CAN.G219.32 Capsicum annuum HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
HanXRQChr02g0038651 Helianthus annuus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
HanXRQChr02g0052691 Helianthus annuus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
HanXRQChr05g0139711 Helianthus annuus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
HanXRQChr05g0152611 Helianthus annuus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
HanXRQChr08g0223961 Helianthus annuus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
HanXRQChr10g0283641 Helianthus annuus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
HanXRQChr10g0284331 Helianthus annuus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
HanXRQChr10g0318111 Helianthus annuus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
HanXRQChr11g0341921 Helianthus annuus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
HanXRQChr14g0459311 Helianthus annuus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
HanXRQCPg0580131 Helianthus annuus HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
Lsat_1_v5_gn_5_67060 Lactuca sativa HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
Potri.011G074901 Populus trichocarpa HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
Potri.011G113742 Populus trichocarpa HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
Potri.019G028200 Populus trichocarpa HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
PGR111G0073 Punica granatum HOM05D000580 ORTHO05D006815 1.5e-06 54.7 32 90.6
CAN.G1595.6 Capsicum annuum HOM05D000580 ORTHO05D006815 2.0e-06 54.3 32 90.6
RcHm_v2.0_Chr6g0260481 Rosa chinensis HOM05D000580 ORTHO05D006815 2.6e-06 53.9 32 90.6
RcHm_v2.0_CPg0501961 Rosa chinensis HOM05D000580 ORTHO05D006815 2.6e-06 53.9 32 90.6
Gohir.A01G128325 Gossypium hirsutum HOM05D000580 ORTHO05D006815 3.4e-06 53.5 32 93.8
Gohir.A12G178630 Gossypium hirsutum HOM05D000580 ORTHO05D006815 3.4e-06 53.5 32 90.6
Eucgr.F03245 Eucalyptus grandis HOM05D000580 ORTHO05D006815 4.5e-06 53.1 32 87.5
Gohir.A05G326916 Gossypium hirsutum HOM05D000580 ORTHO05D006815 4.5e-06 53.1 32 90.6
Gohir.A12G228900 Gossypium hirsutum HOM05D000580 ORTHO05D006815 4.5e-06 53.1 32 93.8
Hund29679 Selenicereus undatus HOM05D000580 ORTHO05D006815 4.5e-06 53.1 32 90.6
Gohir.1Z049866 Gossypium hirsutum HOM05D000580 ORTHO05D006815 5.8e-06 52.8 32 90.6
HanXRQChr04g0094321 Helianthus annuus HOM05D000580 ORTHO05D006815 5.8e-06 52.8 32 87.5
Nn049s41914 Nelumbo nucifera HOM05D000580 ORTHO05D006815 5.8e-06 52.8 32 90.6
PSO548G0006 Papaver somniferum HOM05D000580 ORTHO05D006815 5.8e-06 52.8 32 87.5
Sed0004233 Sechium edule HOM05D000580 ORTHO05D006815 5.8e-06 52.8 32 93.8
Sed0008111 Sechium edule HOM05D000580 ORTHO05D006815 5.8e-06 52.8 32 93.8
Sed0015899 Sechium edule HOM05D000580 ORTHO05D006815 5.8e-06 52.8 32 93.8
Potri.002G174001 Populus trichocarpa HOM05D000580 ORTHO05D006815 7.6e-06 52.4 32 90.6
CARHR292710 Cardamine hirsuta HOM05D000580 ORTHO05D006815 9.9e-06 52.0 32 87.5
CiPaw.10G124800 Carya illinoinensis HOM05D000580 ORTHO05D006815 9.9e-06 52.0 32 90.6
Gohir.A05G301450 Gossypium hirsutum HOM05D000580 ORTHO05D006815 9.9e-06 52.0 32 87.5
Gorai.008G286600 Gossypium raimondii HOM05D000580 ORTHO05D006815 9.9e-06 52.0 32 90.6
Potri.011G074742 Populus trichocarpa HOM05D000580 ORTHO05D006815 9.9e-06 52.0 32 87.5
RcHm_v2.0_Chr4g0390611 Rosa chinensis HOM05D000580 ORTHO05D006815 9.9e-06 52.0 32 87.5


User provided reference genes

Program Settings