Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 1.4e-180 636.3 357 100.0
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 1.8e-119 433.3 362 75.4
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 2.3e-119 433.0 362 72.7
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 8.8e-119 431.0 361 74.5
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 1.5e-115 420.2 361 71.5
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 2.6e-110 402.9 364 69.5
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 3.3e-110 402.5 376 62.8
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 2.1e-104 383.3 357 66.9
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 3.3e-102 375.9 362 63.8
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 3.2e-97 359.4 361 67.0
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 9.8e-94 347.8 367 63.8
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 1.3e-90 337.4 343 64.1
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 1.2e-86 324.3 382 56.3
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 2.2e-85 320.1 292 62.7
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 3.7e-85 319.3 290 63.1
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.2e-83 314.3 278 61.2
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 1.6e-83 313.9 290 60.0
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 2.0e-83 313.5 300 58.7
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.3e-82 310.8 284 57.7
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 2.1e-80 303.5 365 57.8
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 3.6e-80 302.8 369 53.9
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 4.7e-80 302.4 359 53.8
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 8.0e-80 301.6 289 59.5
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 8.9e-79 298.1 420 48.3
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 2.0e-78 297.0 302 56.0
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 5.7e-78 295.4 360 54.2
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 9.8e-78 294.7 288 55.6
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 1.1e-76 291.2 379 51.2
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 1.1e-76 291.2 355 53.5
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.4e-76 290.0 287 54.7
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 3.2e-76 289.7 274 60.9
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 3.2e-76 289.7 368 52.4
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 3.2e-76 289.7 285 55.8
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 7.0e-76 288.5 284 53.9
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 9.2e-76 288.1 275 62.9
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 1.2e-75 287.7 285 55.1
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.2e-75 287.7 290 57.2
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.5e-75 286.2 290 57.2
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 3.5e-75 286.2 284 54.9
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 4.6e-75 285.8 284 56.0
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 4.6e-75 285.8 307 53.4
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 7.8e-75 285.0 381 52.8
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 1.7e-74 283.9 370 51.9
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 3.0e-74 283.1 370 53.0
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 5.6e-73 278.9 362 48.6
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 1.6e-72 277.3 371 50.9
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 1.6e-72 277.3 357 51.5
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 1.0e-71 274.6 288 51.4
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 1.4e-71 274.2 363 53.7
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.1e-71 273.1 319 52.7
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 3.1e-71 273.1 329 54.1
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 5.2e-71 272.3 357 53.2
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 5.2e-71 272.3 290 51.4
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 2.0e-70 270.4 285 52.3
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 3.4e-70 269.6 271 56.5
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 7.5e-70 268.5 365 52.9
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 1.3e-69 267.7 275 55.3
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 1.3e-69 267.7 284 52.8
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 1.7e-69 267.3 283 51.9
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 1.7e-69 267.3 354 46.0
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 2.9e-69 266.5 309 49.5
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 3.2e-68 263.1 368 48.9
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.2e-68 263.1 318 51.9
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 4.1e-68 262.7 291 51.5
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 5.4e-68 262.3 298 52.3
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 9.2e-68 261.5 373 48.8
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 1.6e-67 260.8 363 51.0
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 1.0e-66 258.1 374 50.0
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 1.1e-65 254.6 288 50.0
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 1.9e-65 253.8 497 37.6
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 2.5e-65 253.4 370 48.4
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 1.2e-64 251.1 367 47.4
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 3.6e-64 249.6 289 48.8
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 6.2e-64 248.8 369 47.7
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 1.1e-63 248.1 279 51.6
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 1.4e-63 247.7 371 47.4
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 4.0e-63 246.1 356 46.1
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 6.8e-63 245.4 278 52.5
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 6.8e-63 245.4 284 50.0
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 1.2e-62 244.6 369 46.9
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 1.5e-62 244.2 268 52.2
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 2.0e-62 243.8 273 52.7
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 2.6e-62 243.4 280 54.3
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 3.4e-62 243.0 220 60.5
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 1.3e-61 241.1 250 53.2
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 2.2e-61 240.4 264 55.7
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 2.4e-60 236.9 282 45.7
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 4.1e-60 236.1 280 50.0
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 9.2e-60 235.0 212 61.8
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.3e-58 231.1 277 51.3
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 1.7e-58 230.7 331 43.5
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 8.6e-58 228.4 363 47.7
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 1.9e-57 227.3 277 48.4
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 4.3e-57 226.1 297 46.1
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.4e-55 221.1 361 49.0
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 3.1e-55 219.9 288 48.6
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 2.9e-53 213.4 219 51.6
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 6.4e-53 212.2 373 48.0
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 8.4e-53 211.8 332 43.4
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 2.4e-52 210.3 355 40.0
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 3.2e-52 209.9 332 42.5
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 7.1e-52 208.8 238 49.6
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.2e-51 208.0 342 39.2
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 1.3e-50 204.5 269 46.8
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 8.6e-50 201.8 337 40.1
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 2.8e-48 196.8 299 42.1
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 3.6e-48 196.4 160 63.8
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 1.2e-46 191.4 175 55.4
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 6.4e-45 185.7 296 46.6
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 5.6e-33 146.0 198 43.4
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 2.1e-32 144.1 264 36.0
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 1.7e-29 134.4 297 34.0
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 1.4e-28 131.3 250 32.0
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 1.8e-26 124.4 166 45.8
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 2.4e-23 114.0 285 32.6
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 9.3e-20 102.1 95 57.9
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 1.0e-18 98.6 86 59.3
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 2.3e-18 97.4 351 28.8
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 2.4e-15 87.4 104 51.0
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 3.6e-11 73.6 205 31.7
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 6.1e-11 72.8 204 36.3
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 2.3e-10 70.9 206 30.6
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 3.0e-10 70.5 204 36.3


User provided reference genes

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