Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G207800 Glycine max HOM05D006707 ORTHO05D008243 6.0e-134 482.3 651 100.0
Phvul.010G093200 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 9.5e-87 325.5 436 88.5
VMungo1383G0390 Vigna mungo HOM05D006707 ORTHO05D008243 1.2e-84 318.5 425 90.4
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 1.4e-66 258.5 399 56.9
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 1.4e-66 258.5 432 59.5
Lj1g0019371 Lotus japonicus HOM05D006707 ORTHO05D008243 7.0e-66 256.1 270 72.6
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 4.0e-61 240.4 424 62.7
TPR.G37093 Trifolium pratense HOM05D006707 ORTHO05D008243 2.4e-58 231.1 264 67.0
TPR.G35815 Trifolium pratense HOM05D006707 ORTHO05D008243 4.6e-57 226.9 257 70.4
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 1.4e-53 215.3 388 76.8
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 4.0e-53 213.8 388 73.5
GSVIVG01016661001 Vitis vinifera HOM05D006707 ORTHO05D008243 1.3e-51 208.8 220 69.1
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 2.9e-51 207.6 436 61.7
Cfa019000 Carpinus fangiana HOM05D006707 ORTHO05D008243 9.2e-50 202.6 219 72.6
arahy.Tifrunner.gnm1.ann1.72MQAV Arachis hypogaea HOM05D000449 ORTHO05D008243 4.6e-49 200.3 270 62.2
Dinv07298 Davidia involucrata HOM05D006707 ORTHO05D008243 1.3e-48 198.7 219 68.5
Dinv27614 Davidia involucrata HOM05D006707 ORTHO05D008243 1.3e-48 198.7 219 68.5
Nn4g24204 Nelumbo nucifera HOM05D006707 ORTHO05D008243 6.6e-48 196.4 219 69.9
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 1.9e-47 194.9 216 70.4
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 5.6e-47 193.4 265 62.3
arahy.Tifrunner.gnm1.ann1.U18B68 Arachis hypogaea HOM05D000449 ORTHO05D008243 9.6e-47 192.6 257 63.4
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 6.2e-46 189.9 232 63.4
MD06G1231100 Malus domestica HOM05D006707 ORTHO05D008243 8.1e-46 189.5 220 65.0
RhsimUnG0220600 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.1e-45 189.1 216 68.5
RhsimUnG0239000 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.1e-45 189.1 216 68.5
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 1.8e-45 188.3 388 65.5
Rhsim03G0042300 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.4e-45 188.0 216 68.5
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 3.1e-45 187.6 231 65.8
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 3.1e-45 187.6 228 66.2
Haze_21123 Corylus avellana HOM05D006707 ORTHO05D008243 6.9e-45 186.4 219 69.9
FAN08G3326 Fragaria x ananassa HOM05D006707 ORTHO05D008243 2.0e-44 184.9 220 63.6
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 2.0e-44 184.9 387 66.4
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 2.6e-44 184.5 219 66.2
Manes.06G007500 Manihot esculenta HOM05D006707 ORTHO05D008243 3.4e-44 184.1 219 64.8
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 2.2e-43 181.4 392 63.8
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 2.2e-43 181.4 389 64.5
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 6.4e-43 179.9 236 60.2
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 6.4e-43 179.9 236 60.2
Potri.015G039300 Populus trichocarpa HOM05D006707 ORTHO05D008243 8.4e-43 179.5 219 65.8
Sc10g0004790 Simmondsia chinensis HOM05D006707 ORTHO05D008243 8.4e-43 179.5 219 66.2
Sabra15G0038500 Salix brachista HOM05D006707 ORTHO05D008243 2.4e-42 177.9 216 65.7
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 3.2e-42 177.6 217 58.1
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 4.2e-42 177.2 219 64.4
Atru.BG.186.p Acer truncatum HOM05D006707 ORTHO05D008243 5.4e-42 176.8 218 67.9
Lj5P156T67 Lonicera japonica HOM05D006707 ORTHO05D008243 7.1e-42 176.4 219 63.0
RcHm_v2.0_Chr7g0178541 Rosa chinensis HOM05D006707 ORTHO05D008243 7.1e-42 176.4 220 65.9
Sabra15G0070700 Salix brachista HOM05D006707 ORTHO05D008243 7.1e-42 176.4 216 65.3
Sabra15G0057600 Salix brachista HOM05D006707 ORTHO05D008243 2.7e-41 174.5 218 64.2
Oeu010709.1 Olea europaea HOM05D006707 ORTHO05D008243 3.5e-41 174.1 220 61.8
Actinidia25143 Actinidia chinensis HOM05D006707 ORTHO05D008243 6.0e-41 173.3 232 62.5
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 6.0e-41 173.3 216 64.4
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 7.8e-41 172.9 389 75.1
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 7.8e-41 172.9 219 62.1
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 1.7e-40 171.8 398 55.3
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 5.1e-40 170.2 208 68.3
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 5.1e-40 170.2 208 64.9
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 6.6e-40 169.9 219 64.8
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 2.5e-39 167.9 386 65.3
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 4.3e-39 167.2 397 47.9
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 7.3e-39 166.4 398 47.7
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 9.6e-39 166.0 220 60.9
MSTRG.16972 Avicennia marina HOM05D006707 ORTHO05D008243 2.8e-38 164.5 220 62.3
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 2.8e-38 164.5 398 54.3
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 4.8e-38 163.7 398 50.3
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 6.2e-38 163.3 220 47.3
AL3G31170 Arabidopsis lyrata HOM05D006707 ORTHO05D008243 8.1e-38 162.9 220 64.5
AT3G18020 Arabidopsis thaliana HOM05D006707 ORTHO05D008243 1.4e-37 162.2 220 63.6
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 1.4e-37 162.2 228 55.3
PGR044G0521 Punica granatum HOM05D006707 ORTHO05D008243 3.1e-37 161.0 247 59.9
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 3.1e-37 161.0 219 63.5
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 4.0e-37 160.6 387 43.2
PSO478G5041 Papaver somniferum HOM05D006707 ORTHO05D008243 5.3e-37 160.2 217 63.1
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 9.0e-37 159.5 221 60.6
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 5.8e-36 156.8 220 62.7
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 7.6e-36 156.4 220 59.1
DCAR_014733 Daucus carota HOM05D006707 ORTHO05D008243 1.3e-35 155.6 227 60.4
Migut.I00309 Erythranthe guttata HOM05D006707 ORTHO05D008243 3.8e-35 154.1 220 59.1
ATR0564G450 Amborella trichopoda HOM05D006707 ORTHO05D008243 4.9e-35 153.7 219 64.4
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 6.4e-35 153.3 391 58.6
A05p31810 Brassica napus HOM05D006707 ORTHO05D008243 1.1e-34 152.5 220 63.2
C05p48280 Brassica napus HOM05D006707 ORTHO05D008243 1.4e-34 152.1 220 62.7
BraA05t22012Z Brassica rapa HOM05D006707 ORTHO05D008243 1.9e-34 151.8 220 62.7
Carub.0003s1773 Capsella rubella HOM05D006707 ORTHO05D008243 7.1e-34 149.8 220 62.3
Aa31LG8G4870 Aethionema arabicum HOM05D006707 ORTHO05D008243 9.3e-34 149.4 219 63.0
Sp3g16130 Schrenkiella parvula HOM05D006707 ORTHO05D008243 9.3e-34 149.4 220 62.7
BcaC05g28725 Brassica carinata HOM05D006707 ORTHO05D008243 1.6e-33 148.7 220 61.4
BolC5t33562H Brassica oleracea HOM05D006707 ORTHO05D008243 1.6e-33 148.7 220 61.4
THA.LOC104820351 Tarenaya hassleriana HOM05D006707 ORTHO05D008243 1.6e-33 148.7 220 61.8
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 2.1e-33 148.3 217 62.7
BcaB06g25867 Brassica carinata HOM05D006707 ORTHO05D008243 2.7e-33 147.9 220 61.8
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 3.1e-29 134.4 207 58.0
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 1.7e-27 128.6 223 56.1
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 2.7e-25 121.3 209 55.0
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 6.7e-24 116.7 101 57.4
PSO017G3187 Papaver somniferum HOM05D006707 ORTHO05D008243 3.3e-23 114.4 103 54.4
SEGI_24072 Sequoiadendron giganteum HOM05D006707 ORTHO05D008243 9.0e-21 106.3 194 59.3
CDE07G1516 Ceratophyllum demersum HOM05D006707 ORTHO05D008243 1.0e-19 102.8 219 53.4
Phvul.008G091500 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 2.2e-19 101.7 235 34.0
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 8.4e-19 99.8 94 54.3
arahy.Tifrunner.gnm1.ann1.55ENF0 Arachis hypogaea HOM05D006707 ORTHO05D008243 2.5e-18 98.2 141 39.7
Os07g0674300 Oryza sativa ssp. japonica HOM05D006707 ORTHO05D008243 4.8e-14 84.0 234 33.3
Zm00001eb111370 Zea mays HOM05D006707 ORTHO05D008243 2.0e-12 78.6 236 31.4
Ciclev10024364m.g Citrus clementina HOM05D006707 ORTHO05D008243 3.4e-12 77.8 65 58.5
CSS0017365 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 1.2e-09 69.3 61 57.4
CSS0026236 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 1.2e-09 69.3 61 57.4
ECA246G2801 Erigeron canadensis HOM05D006707 ORTHO05D008243 2.0e-07 62.0 65 43.1
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.5e-07 61.6 57 49.1
PSO017G4261 Papaver somniferum HOM05D006707 ORTHO05D008243 4.3e-07 60.8 43 65.1
FAN13G2143 Fragaria x ananassa HOM05D006707 ORTHO05D008243 5.7e-07 60.5 35 77.1
arahy.Tifrunner.gnm1.ann1.1F7K7B Arachis hypogaea HOM05D006707 ORTHO05D008243 7.4e-07 60.1 39 71.8
HanXRQChr10g0277831 Helianthus annuus HOM05D006707 ORTHO05D008243 2.8e-06 58.2 152 27.0
RhsimUnG0220500 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.8e-06 58.2 35 65.7
MELO3C017354.2 Cucumis melo HOM05D006707 ORTHO05D008243 4.8e-06 57.4 35 71.4


User provided reference genes

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