Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G102100 Glycine max HOM05D005249 ORTHO05D006457 2.6e-95 352.1 178 100.0
Glyma.08G312800 Glycine max HOM05D005249 ORTHO05D006457 7.5e-87 323.9 182 92.3
VMungo0540G0590 Vigna mungo HOM05D005249 ORTHO05D006457 1.3e-78 296.6 178 85.4
Phvul.006G038600 Phaseolus vulgaris HOM05D005249 ORTHO05D006457 9.2e-77 290.4 178 85.4
Lj6g0004310 Lotus japonicus HOM05D005249 ORTHO05D006457 1.9e-74 282.7 177 84.2
Lalb_Chr15g0080371 Lupinus albus HOM05D005249 ORTHO05D006457 1.1e-72 276.9 178 82.0
Ca_08298_v3 Cicer arietinum L. HOM05D005249 ORTHO05D006457 5.2e-72 274.6 181 82.3
arahy.Tifrunner.gnm1.ann1.EK5LIC Arachis hypogaea HOM05D005249 ORTHO05D006457 2.6e-71 272.3 184 77.2
arahy.Tifrunner.gnm1.ann1.I048YJ Arachis hypogaea HOM05D005249 ORTHO05D006457 5.8e-71 271.2 183 78.7
Medtr3g019320 Medicago truncatula HOM05D005249 ORTHO05D006457 3.9e-67 258.5 182 76.4
COL.COLO4_09631 Corchorus olitorius HOM05D005249 ORTHO05D006457 2.1e-65 252.7 178 74.7
Psat5g216840 Pisum sativum HOM05D005249 ORTHO05D006457 1.4e-64 250.0 181 74.6
FvH4_3g22190 Fragaria vesca HOM05D005249 ORTHO05D006457 3.1e-64 248.8 179 74.3
Gohir.D01G064800 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.5e-63 246.5 179 74.9
Gorai.002G085700 Gossypium raimondii HOM05D005249 ORTHO05D006457 1.5e-63 246.5 179 74.9
Eucgr.F03446 Eucalyptus grandis HOM05D005249 ORTHO05D006457 2.6e-63 245.7 179 74.3
Gohir.A01G077300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.3e-62 243.4 179 73.7
QL08p011891 Quercus lobata HOM05D005249 ORTHO05D006457 1.7e-62 243.0 178 73.0
QL08p012062 Quercus lobata HOM05D005249 ORTHO05D006457 1.7e-62 243.0 178 73.0
Lj8A167T50 Lonicera japonica HOM05D005249 ORTHO05D006457 2.9e-62 242.3 181 72.4
Haze_09646 Corylus avellana HOM05D005249 ORTHO05D006457 3.8e-62 241.9 179 72.1
Cfa020386 Carpinus fangiana HOM05D005249 ORTHO05D006457 4.9e-62 241.5 179 72.1
RcHm_v2.0_Chr5g0038151 Rosa chinensis HOM05D005249 ORTHO05D006457 8.4e-62 240.7 179 72.1
Thecc.07G044000 Theobroma cacao HOM05D005249 ORTHO05D006457 1.9e-61 239.6 179 72.1
CSS0021065 Camellia sinensis var. sinensis HOM05D005249 ORTHO05D006457 3.2e-61 238.8 183 71.6
Potri.001G420900 Populus trichocarpa HOM05D005249 ORTHO05D006457 3.2e-61 238.8 178 73.0
TAR626G0063 Trochodendron aralioides HOM05D005249 ORTHO05D006457 3.2e-61 238.8 183 71.0
CANSAT21G2135 Cannabis sativa HOM05D005249 ORTHO05D006457 4.2e-61 238.4 165 75.8
Gohir.D05G366500 Gossypium hirsutum HOM05D005249 ORTHO05D006457 4.2e-61 238.4 180 71.7
Manes.15G073900 Manihot esculenta HOM05D005249 ORTHO05D006457 5.4e-61 238.0 179 72.1
CiPaw.11G187100 Carya illinoinensis HOM05D005249 ORTHO05D006457 7.1e-61 237.7 179 71.5
Sabra16G0285800 Salix brachista HOM05D005249 ORTHO05D006457 7.1e-61 237.7 181 70.7
GSVIVG01002001001 Vitis vinifera HOM05D005249 ORTHO05D006457 7.1e-61 237.7 182 70.9
Ciclev10009689m.g Citrus clementina HOM05D005249 ORTHO05D006457 1.2e-60 236.9 180 72.8
Prupe.4G209000 Prunus persica HOM05D005249 ORTHO05D006457 2.1e-60 236.1 179 70.4
ECA246G1486 Erigeron canadensis HOM05D005249 ORTHO05D006457 7.8e-60 234.2 183 68.3
PGR031G1044 Punica granatum HOM05D005249 ORTHO05D006457 7.8e-60 234.2 179 73.2
Sc16g0006280 Simmondsia chinensis HOM05D005249 ORTHO05D006457 1.7e-59 233.0 183 68.3
TAR624G0120 Trochodendron aralioides HOM05D005249 ORTHO05D006457 1.7e-59 233.0 181 70.7
Hma1.2p1_1271F.1_g271820 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 2.3e-59 232.6 181 69.6
Hma1.2p1_1609F.1_g293423 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 2.3e-59 232.6 181 69.6
Migut.M01785 Erythranthe guttata HOM05D005249 ORTHO05D006457 3.0e-59 232.3 179 70.9
Lsat_1_v5_gn_5_5181 Lactuca sativa HOM05D005249 ORTHO05D006457 5.1e-59 231.5 179 68.2
Dinv22281 Davidia involucrata HOM05D005249 ORTHO05D006457 8.7e-59 230.7 182 70.3
BolC5t33095H Brassica oleracea HOM05D005249 ORTHO05D006457 1.1e-58 230.3 187 70.6
HanXRQChr05g0159111 Helianthus annuus HOM05D005249 ORTHO05D006457 1.1e-58 230.3 166 72.3
MD03G1207700 Malus domestica HOM05D005249 ORTHO05D006457 2.5e-58 229.2 179 69.3
A05p28310 Brassica napus HOM05D005249 ORTHO05D006457 4.3e-58 228.4 181 70.7
BraA05t21713Z Brassica rapa HOM05D005249 ORTHO05D006457 4.3e-58 228.4 181 70.7
Carub.0003s2051 Capsella rubella HOM05D005249 ORTHO05D006457 5.6e-58 228.0 183 71.0
Thhalv10021639m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 5.6e-58 228.0 182 70.9
Duzib213G0461 Durio zibethinus HOM05D005249 ORTHO05D006457 7.3e-58 227.6 179 70.4
Manes.03G127000 Manihot esculenta HOM05D005249 ORTHO05D006457 7.3e-58 227.6 179 69.8
TWI38G0945 Tripterygium wilfordii HOM05D005249 ORTHO05D006457 7.3e-58 227.6 179 69.3
Aa31LG10G3330 Aethionema arabicum HOM05D005249 ORTHO05D006457 1.3e-57 226.9 182 68.1
C05p43800 Brassica napus HOM05D005249 ORTHO05D006457 1.3e-57 226.9 184 69.0
Cpa.g.sc97.36 Carica papaya HOM05D005249 ORTHO05D006457 1.3e-57 226.9 172 70.9
PSO210G5271 Papaver somniferum HOM05D005249 ORTHO05D006457 1.6e-57 226.5 188 68.1
SGA_v2.0_scaffold258G45797 Striga asiatica HOM05D005249 ORTHO05D006457 2.1e-57 226.1 184 68.5
Nn1g07102 Nelumbo nucifera HOM05D005249 ORTHO05D006457 2.8e-57 225.7 181 65.2
Gohir.A04G019300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 4.8e-57 224.9 154 75.3
Aqoxy1G03622 Aquilegia oxysepala HOM05D005249 ORTHO05D006457 6.2e-57 224.6 182 67.0
MBI02_g28338_MAGBIO Magnolia biondii HOM05D005249 ORTHO05D006457 6.2e-57 224.6 183 68.9
Carub.0001s3985 Capsella rubella HOM05D005249 ORTHO05D006457 8.1e-57 224.2 181 69.1
Sp3g18550 Schrenkiella parvula HOM05D005249 ORTHO05D006457 8.1e-57 224.2 184 70.1
THA.LOC104798778 Tarenaya hassleriana HOM05D005249 ORTHO05D006457 1.1e-56 223.8 187 66.3
AUR62020502 Chenopodium quinoa HOM05D005249 ORTHO05D006457 1.8e-56 223.0 179 67.6
Sp1g37640 Schrenkiella parvula HOM05D005249 ORTHO05D006457 2.4e-56 222.6 177 67.8
A06p02830 Brassica napus HOM05D005249 ORTHO05D006457 4.0e-56 221.9 179 67.6
BraA06t23490Z Brassica rapa HOM05D005249 ORTHO05D006457 4.0e-56 221.9 179 67.6
AL8G37450 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 5.3e-56 221.5 180 67.2
A05p19870 Brassica napus HOM05D005249 ORTHO05D006457 6.9e-56 221.1 179 67.0
BraA05t20892Z Brassica rapa HOM05D005249 ORTHO05D006457 6.9e-56 221.1 179 67.0
AT1G50900 Arabidopsis thaliana HOM05D005249 ORTHO05D006457 9.0e-56 220.7 179 67.6
PSO832G4498 Papaver somniferum HOM05D005249 ORTHO05D006457 9.0e-56 220.7 186 66.1
Cc05_g13500 Coffea canephora HOM05D005249 ORTHO05D006457 1.2e-55 220.3 190 66.3
AUR62015702 Chenopodium quinoa HOM05D005249 ORTHO05D006457 1.5e-55 219.9 179 66.5
Gorai.009G425200 Gossypium raimondii HOM05D005249 ORTHO05D006457 1.5e-55 219.9 220 58.6
BcaB07g33531 Brassica carinata HOM05D005249 ORTHO05D006457 2.0e-55 219.5 183 66.7
BcaC08g43263 Brassica carinata HOM05D005249 ORTHO05D006457 2.0e-55 219.5 154 74.0
C06p06070 Brassica napus HOM05D005249 ORTHO05D006457 2.0e-55 219.5 154 74.0
BolC6t35720H Brassica oleracea HOM05D005249 ORTHO05D006457 2.0e-55 219.5 154 74.0
ClCG10G005560 Citrullus lanatus HOM05D005249 ORTHO05D006457 2.6e-55 219.2 179 68.2
Thhalv10011819m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 2.6e-55 219.2 167 69.5
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 3.4e-55 218.8 180 68.9
Ah.06g182920 Amaranthus hybridus HOM05D005249 ORTHO05D006457 4.5e-55 218.4 181 64.6
C05p33210 Brassica napus HOM05D005249 ORTHO05D006457 5.8e-55 218.0 150 74.7
Actinidia09913 Actinidia chinensis HOM05D005249 ORTHO05D006457 7.6e-55 217.6 182 66.5
AL1G58630 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 7.6e-55 217.6 183 65.6
Sed0007548 Sechium edule HOM05D005249 ORTHO05D006457 7.6e-55 217.6 181 68.0
unitig_578.g16003 Utricularia gibba HOM05D005249 ORTHO05D006457 9.9e-55 217.2 162 68.5
MELO3C025397.2 Cucumis melo HOM05D005249 ORTHO05D006457 2.2e-54 216.1 179 68.2
Actinidia05108 Actinidia chinensis HOM05D005249 ORTHO05D006457 2.9e-54 215.7 182 65.4
MSTRG.15162 Avicennia marina HOM05D005249 ORTHO05D006457 2.9e-54 215.7 181 66.3
CsaV3_3G005280 Cucumis sativus L. HOM05D005249 ORTHO05D006457 6.4e-54 214.5 179 67.6
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.1e-53 213.8 127 81.9
CAN.G1781.9 Capsicum annuum HOM05D005249 ORTHO05D006457 1.9e-53 213.0 185 64.3
EL10Ac4g07899 Beta vulgaris HOM05D005249 ORTHO05D006457 4.2e-53 211.8 178 64.6
Nitab4.5_0005048g0030 Nicotiana tabacum HOM05D005249 ORTHO05D006457 4.2e-53 211.8 183 67.2
Solyc10g006370.3 Solanum lycopersicum HOM05D005249 ORTHO05D006457 4.2e-53 211.8 179 65.4
Peaxi162Scf00387g00046 Petunia axillaris HOM05D005249 ORTHO05D006457 9.3e-53 210.7 172 67.4
Atru.chr2.3277 Acer truncatum HOM05D005249 ORTHO05D006457 1.6e-52 209.9 119 85.7
CDE05G2685 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.6e-52 209.9 124 83.9
ATR0752G229 Amborella trichopoda HOM05D005249 ORTHO05D006457 2.1e-52 209.5 162 69.1
PGSC0003DMG400014394 Solanum tuberosum HOM05D005249 ORTHO05D006457 6.0e-52 208.0 179 64.2
Oeu062605.1 Olea europaea HOM05D005249 ORTHO05D006457 1.0e-51 207.2 164 68.3
BcaB02g11192 Brassica carinata HOM05D005249 ORTHO05D006457 1.9e-50 203.0 155 70.3
Zm00001eb322850 Zea mays HOM05D005249 ORTHO05D006457 1.9e-50 203.0 196 61.2
Rhsim04G0001800 Rhododendron simsii HOM05D005249 ORTHO05D006457 2.5e-50 202.6 192 64.1
HPP92_017607 Vanilla planifolia HOM05D005249 ORTHO05D006457 5.6e-50 201.4 181 62.4
FAN11G3900 Fragaria x ananassa HOM05D005249 ORTHO05D006340 7.4e-50 201.1 289 45.7
Dinv40734 Davidia involucrata HOM05D005249 ORTHO05D006457 1.6e-49 199.9 150 71.3
FAN16G3206 Fragaria x ananassa HOM05D005249 ORTHO05D006340 2.8e-49 199.1 289 45.0
Sopen10g002320 Solanum pennellii HOM05D005249 ORTHO05D006457 4.8e-49 198.4 129 76.7
CDE05G0273 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 4.0e-48 195.3 185 60.0
Os07g0520800 Oryza sativa ssp. japonica HOM05D005249 ORTHO05D006457 6.9e-48 194.5 118 80.5
CDE11G0574 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 9.0e-48 194.1 168 63.1
BcaB07g33530 Brassica carinata HOM05D005249 ORTHO05D006457 5.8e-47 191.4 157 67.5
SMO137G0373 Selaginella moellendorffii HOM05D005249 ORTHO05D006457 1.2e-44 183.7 146 63.0
SEGI_08050 Sequoiadendron giganteum HOM05D005249 ORTHO05D006457 1.1e-42 177.2 164 61.6
CBR_g12744 Chara braunii HOM05D005249 ORTHO05D006457 8.2e-41 171.0 142 66.2
Nitab4.5_0001393g0170 Nicotiana tabacum HOM05D005249 ORTHO05D006457 2.2e-38 162.9 184 58.2
Mapoly0006s0110 Marchantia polymorpha HOM05D005249 ORTHO05D006457 6.5e-38 161.4 155 58.7
Pp3c5_16520 Physcomitrium patens HOM05D005249 ORTHO05D006457 1.1e-37 160.6 149 55.7
vmacro09735 Vaccinium macrocarpon HOM05D005249 ORTHO05D006457 6.0e-36 154.8 216 50.0
TPR.G3850 Trifolium pratense HOM05D005249 ORTHO05D006457 4.1e-32 142.1 81 88.9
FAN21G3293 Fragaria x ananassa HOM05D005249 ORTHO05D006457 2.6e-31 139.4 82 89.0
CARHR096310 Cardamine hirsuta HOM05D005249 ORTHO05D006457 3.4e-31 139.0 87 82.8
BcaB06g26188 Brassica carinata HOM05D005249 ORTHO05D006457 4.5e-31 138.7 181 50.3
Rhsim04G0000700 Rhododendron simsii HOM05D005249 ORTHO05D006457 7.6e-31 137.9 87 80.5
Cre12.g551950 Chlamydomonas reinhardtii HOM05D005249 ORTHO05D006457 6.5e-30 134.8 100 61.0
CARHR040950 Cardamine hirsuta HOM05D005249 ORTHO05D006457 8.5e-30 134.4 87 77.0
Glyma.09G102000 Glycine max HOM05D005249 ORTHO05D006457 8.5e-30 134.4 86 83.7
Cfa020388 Carpinus fangiana HOM05D005249 ORTHO05D006457 1.9e-29 133.3 82 82.9
PRCOL_00000858 Prasinoderma coloniale HOM05D005249 ORTHO05D006457 5.3e-24 115.2 97 56.7
MCO16G329 Micromonas commoda HOM05D005249 ORTHO05D006457 1.3e-22 110.5 100 55.0
CARHR040940 Cardamine hirsuta HOM05D005249 ORTHO05D006457 3.7e-17 92.4 95 58.9
CARHR096330 Cardamine hirsuta HOM05D005249 ORTHO05D006457 8.2e-17 91.3 108 53.7
BcaC05g27384 Brassica carinata HOM05D005249 ORTHO05D006457 3.1e-16 89.4 93 54.8
Atru.chr2.3276 Acer truncatum HOM05D005249 ORTHO05D006457 3.8e-14 82.4 54 77.8
Nn1g07101 Nelumbo nucifera HOM05D005249 ORTHO05D006457 9.4e-13 77.8 70 55.7
BcaC05g27382 Brassica carinata HOM05D005249 ORTHO05D006457 8.0e-12 74.7 54 74.1
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 1.4e-08 63.9 42 71.4
CBR_g602 Chara braunii HOM05D005249 ORTHO05D006457 4.1e-08 62.4 69 43.5
FAN11G2388 Fragaria x ananassa HOM05D000371 ORTHO05D006340 7.0e-08 61.6 96 43.8
Hund02097 Selenicereus undatus HOM05D000420 ORTHO05D000110 7.0e-08 61.6 85 42.4
FAN16G2982 Fragaria x ananassa HOM05D000371 ORTHO05D006340 1.2e-07 60.8 96 43.8
FvH4_3g22200 Fragaria vesca HOM05D000371 ORTHO05D006340 3.5e-07 59.3 96 43.8
RcHm_v2.0_Chr5g0038161 Rosa chinensis HOM05D000371 ORTHO05D006340 5.0e-06 55.5 94 42.6
Pp3c6_9300 Physcomitrium patens HOM05D005249 ORTHO05D006457 6.5e-06 55.1 68 39.7


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