Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G053000 Glycine max HOM05D000307 ORTHO05D000166 8.4e-70 266.9 137 100.0
Glyma.11G186100 Glycine max HOM05D000307 ORTHO05D000166 5.0e-22 108.2 183 42.1
Glyma.18G052800 Glycine max HOM05D000307 ORTHO05D000166 6.8e-19 97.8 174 36.8
Glyma.18G053400 Glycine max HOM05D000307 ORTHO05D000166 4.1e-16 88.6 95 44.2
Phvul.006G078100 Phaseolus vulgaris HOM05D000307 ORTHO05D000166 1.3e-14 83.6 173 31.8
VMungo0540G1237 Vigna mungo HOM05D000307 ORTHO05D000166 4.2e-13 78.6 190 28.9
VMungo0540G0200 Vigna mungo HOM05D000307 ORTHO05D000166 8.0e-12 74.3 171 32.7
Phvul.006G078000 Phaseolus vulgaris HOM05D000307 ORTHO05D000166 1.0e-11 73.9 95 41.1
Phvul.006G077900 Phaseolus vulgaris HOM05D000307 ORTHO05D000166 3.0e-11 72.4 170 32.4
VMungo0540G2063 Vigna mungo HOM05D000307 ORTHO05D000166 3.0e-11 72.4 95 41.1
Lalb_Chr02g0148031 Lupinus albus HOM05D000307 ORTHO05D000166 1.5e-10 70.1 183 30.6
Medtr8g036130 Medicago truncatula HOM05D000307 ORTHO05D000166 2.2e-09 66.2 178 27.5
Lalb_Chr18g0053561 Lupinus albus HOM05D000307 ORTHO05D000166 3.7e-09 65.5 186 27.4
Lj2g0018661 Lotus japonicus HOM05D000307 ORTHO05D000166 6.3e-09 64.7 149 30.2
Lj6g0024616 Lotus japonicus HOM05D000307 ORTHO05D000166 1.1e-08 63.9 174 27.0
Glyma.18G042000 Glycine max HOM05D000307 ORTHO05D000166 1.8e-08 63.2 177 27.1
Ca_15048_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 2.4e-08 62.8 159 28.3
Medtr4g031910 Medicago truncatula HOM05D000307 ORTHO05D000166 3.1e-08 62.4 159 30.2
Lalb_Chr21g0310481 Lupinus albus HOM05D000307 ORTHO05D000166 4.1e-08 62.0 167 28.7
SGA_v2.0_scaffold279G46786 Striga asiatica HOM05D000307 ORTHO05D000166 4.1e-08 62.0 184 29.3
Glyma.11G214600 Glycine max HOM05D000307 ORTHO05D000166 5.4e-08 61.6 177 26.6
Psat5g149040 Pisum sativum HOM05D000307 ORTHO05D000166 5.4e-08 61.6 159 27.0
Cc02_g35890 Coffea canephora HOM05D000307 ORTHO05D000166 7.0e-08 61.2 180 27.2
Phvul.001G228600 Phaseolus vulgaris HOM05D000307 ORTHO05D000166 7.0e-08 61.2 177 26.6
Lj6g0013084 Lotus japonicus HOM05D000307 ORTHO05D000166 1.2e-07 60.5 190 26.8
Nitab4.5_0000001g0140 Nicotiana tabacum HOM05D000307 ORTHO05D000166 1.6e-07 60.1 164 29.9
Ca_15042_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 2.0e-07 59.7 99 34.3
Lj4g0021083 Lotus japonicus HOM05D000307 ORTHO05D000166 2.0e-07 59.7 138 27.5
Medtr4g032290 Medicago truncatula HOM05D000307 ORTHO05D000166 2.0e-07 59.7 83 36.1
Lj4g0004882 Lotus japonicus HOM05D000307 ORTHO05D000166 2.7e-07 59.3 148 27.7
Lj4g0012176 Lotus japonicus HOM05D000307 ORTHO05D000166 2.7e-07 59.3 148 27.7
Lj4g0018608 Lotus japonicus HOM05D000307 ORTHO05D000166 2.7e-07 59.3 148 27.7
Lj4g0025943 Lotus japonicus HOM05D000307 ORTHO05D000166 2.7e-07 59.3 148 27.7
Nitab4.5_0000009g0060 Nicotiana tabacum HOM05D000307 ORTHO05D000166 2.7e-07 59.3 175 29.1
Peaxi162Scf00222g00424 Petunia axillaris HOM05D000307 ORTHO05D000166 2.7e-07 59.3 180 28.3
Sc17g0006780 Simmondsia chinensis HOM05D000307 ORTHO05D000166 2.7e-07 59.3 173 29.5
Lalb_Chr15g0085891 Lupinus albus HOM05D000307 ORTHO05D000166 3.5e-07 58.9 158 27.8
TPR.G17576 Trifolium pratense HOM05D000307 ORTHO05D000166 3.5e-07 58.9 159 27.0
DCAR_007931 Daucus carota HOM05D000307 ORTHO05D000166 4.5e-07 58.5 170 28.2
DCAR_007933 Daucus carota HOM05D000307 ORTHO05D000166 4.5e-07 58.5 170 28.2
DCAR_007935 Daucus carota HOM05D000307 ORTHO05D000166 4.5e-07 58.5 170 28.2
Nitab4.5_0001463g0130 Nicotiana tabacum HOM05D000307 ORTHO05D000166 4.5e-07 58.5 141 31.9
TPR.G27383 Trifolium pratense HOM05D000307 ORTHO05D000166 5.9e-07 58.2 89 40.4
VMungo1383G0696 Vigna mungo HOM05D000307 ORTHO05D000166 5.9e-07 58.2 177 26.0
Ca_15047_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 1.0e-06 57.4 73 38.4
arahy.Tifrunner.gnm1.ann1.5M65ZF Arachis hypogaea HOM05D000307 ORTHO05D000166 1.7e-06 56.6 168 27.4
Peaxi162Scf00194g00005 Petunia axillaris HOM05D000307 ORTHO05D000166 1.7e-06 56.6 158 28.5
Peaxi162Scf00487g00043 Petunia axillaris HOM05D000307 ORTHO05D000166 1.7e-06 56.6 158 28.5
Haze_02940 Corylus avellana HOM05D000307 ORTHO05D000166 2.3e-06 56.2 175 26.3
Lsat_1_v5_gn_3_36681 Lactuca sativa HOM05D000307 ORTHO05D000166 2.3e-06 56.2 161 28.0
DCAR_017625 Daucus carota HOM05D000307 ORTHO05D000166 2.9e-06 55.8 170 27.6
Lj4g0017653 Lotus japonicus HOM05D000307 ORTHO05D000166 2.9e-06 55.8 148 25.7
Lj4g0023178 Lotus japonicus HOM05D000307 ORTHO05D000166 2.9e-06 55.8 181 26.0
Medtr3g466980 Medicago truncatula HOM05D000307 ORTHO05D000166 2.9e-06 55.8 87 31.0
MELO3C021692.2 Cucumis melo HOM05D000307 ORTHO05D000166 3.8e-06 55.5 166 27.7
Lj5P318T22 Lonicera japonica HOM05D000307 ORTHO05D000166 3.8e-06 55.5 165 27.9
Lj4g0006124 Lotus japonicus HOM05D000307 ORTHO05D000166 3.8e-06 55.5 158 25.9
Lj4g0007237 Lotus japonicus HOM05D000307 ORTHO05D000166 3.8e-06 55.5 158 25.9
Lj4g0021048 Lotus japonicus HOM05D000307 ORTHO05D000166 3.8e-06 55.5 158 25.9
Lj4g0024546 Lotus japonicus HOM05D000307 ORTHO05D000166 3.8e-06 55.5 158 25.9
Ca_18733_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 5.0e-06 55.1 158 25.3
HanXRQChr02g0058811 Helianthus annuus HOM05D000307 ORTHO05D000166 5.0e-06 55.1 158 29.1
HanXRQChr10g0296351 Helianthus annuus HOM05D000307 ORTHO05D000166 5.0e-06 55.1 176 29.0
HanXRQChr10g0296361 Helianthus annuus HOM05D000307 ORTHO05D000166 5.0e-06 55.1 158 29.1
Peaxi162Scf00222g00046 Petunia axillaris HOM05D000307 ORTHO05D000166 5.0e-06 55.1 78 39.7
Lj4g0012393 Lotus japonicus HOM05D000307 ORTHO05D000166 6.6e-06 54.7 111 31.5
Lj4g0013065 Lotus japonicus HOM05D000307 ORTHO05D000166 6.6e-06 54.7 158 25.9
Nitab4.5_0000001g0130 Nicotiana tabacum HOM05D000307 ORTHO05D000166 6.6e-06 54.7 184 28.3
HanXRQChr15g0479321 Helianthus annuus HOM05D000307 ORTHO05D000166 8.6e-06 54.3 158 28.5
Psat7g120000 Pisum sativum HOM05D000307 ORTHO05D000166 8.6e-06 54.3 100 31.0
TPR.G23204 Trifolium pratense HOM05D000307 ORTHO05D000166 8.6e-06 54.3 158 25.3


User provided reference genes

Program Settings