Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 8.5e-80 300.8 223 100.0
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 2.4e-74 282.7 225 95.1
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 3.2e-66 255.8 223 90.1
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 1.3e-64 250.4 227 88.5
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 2.8e-54 216.1 224 82.1
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 2.8e-54 216.1 226 80.5
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 3.6e-54 215.7 224 83.0
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 8.3e-51 204.5 226 79.6
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 2.4e-50 203.0 245 75.1
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 5.4e-50 201.8 226 79.2
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 4.6e-49 198.7 226 79.6
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 4.3e-47 192.2 225 69.8
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 2.1e-46 189.9 176 89.8
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 4.0e-45 185.7 223 76.2
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 4.0e-45 185.7 228 74.6
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 5.2e-45 185.3 225 76.9
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 6.8e-45 184.9 221 75.1
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 8.9e-45 184.5 176 84.7
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 8.9e-45 184.5 240 69.6
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 1.2e-44 184.1 220 71.8
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 4.4e-44 182.2 223 71.3
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 4.4e-44 182.2 178 86.0
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 4.4e-44 182.2 224 76.3
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 5.8e-44 181.8 223 70.9
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 5.8e-44 181.8 224 75.0
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 1.3e-43 180.6 228 73.7
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 1.3e-43 180.6 230 75.2
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 6.4e-43 178.3 223 70.4
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 6.4e-43 178.3 183 84.2
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 8.4e-43 177.9 182 84.6
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 1.4e-42 177.2 223 73.1
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 1.9e-42 176.8 220 75.9
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 5.4e-42 175.3 231 73.2
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 5.4e-42 175.3 224 71.0
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 5.4e-42 175.3 220 72.3
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 2.7e-41 172.9 215 71.6
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.0e-40 171.0 224 70.5
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.3e-40 170.6 225 69.3
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 3.9e-40 169.1 226 66.8
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 5.1e-40 168.7 224 70.1
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 5.1e-40 168.7 224 70.1
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 5.1e-40 168.7 226 61.1
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 6.6e-40 168.3 225 72.0
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 8.6e-40 167.9 219 70.8
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 8.6e-40 167.9 220 70.5
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 8.6e-40 167.9 168 82.7
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 1.5e-39 167.2 224 72.3
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 1.9e-39 166.8 230 65.2
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 2.5e-39 166.4 221 72.4
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 3.3e-39 166.0 232 70.3
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 3.3e-39 166.0 224 70.1
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 1.2e-38 164.1 225 72.9
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 1.2e-38 164.1 225 69.8
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 1.2e-38 164.1 234 70.5
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 1.6e-38 163.7 221 73.3
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 8.1e-38 161.4 232 60.3
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 1.1e-37 161.0 172 80.8
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 1.1e-37 161.0 225 71.1
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 1.1e-37 161.0 173 76.9
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 1.8e-37 160.2 183 80.3
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 4.0e-37 159.1 228 70.6
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 4.0e-37 159.1 183 79.8
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 8.9e-37 157.9 245 51.8
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 1.2e-36 157.5 172 83.7
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 1.5e-36 157.1 225 65.8
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 1.5e-36 157.1 223 66.4
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 3.4e-36 156.0 178 83.1
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 2.9e-35 152.9 171 77.2
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 3.8e-35 152.5 221 72.4
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 4.9e-35 152.1 163 83.4
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 2.4e-34 149.8 170 81.2
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 5.4e-34 148.7 224 67.4
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 5.4e-34 148.7 142 96.5
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 7.1e-34 148.3 179 72.6
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 4.6e-33 145.6 144 93.8
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 1.7e-32 143.7 210 69.0
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 3.9e-32 142.5 209 70.3
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 1.5e-31 140.6 149 85.9
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 2.5e-31 139.8 226 62.4
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 2.5e-31 139.8 226 62.4
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 2.5e-31 139.8 226 62.4
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.3e-31 138.3 207 68.6
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 2.1e-30 136.7 169 79.9
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 1.1e-29 134.4 202 71.8
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 4.0e-29 132.5 228 61.4
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 6.9e-29 131.7 227 61.2
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 1.2e-28 131.0 195 65.1
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 1.2e-28 131.0 225 62.7
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 2.6e-28 129.8 224 61.2
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 3.4e-28 129.4 175 64.0
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 7.6e-28 128.3 109 70.6
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 7.6e-28 128.3 224 61.2
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 2.4e-26 123.2 225 60.4
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 4.2e-26 122.5 165 67.3
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 7.1e-26 121.7 170 69.4
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 7.9e-25 118.2 183 66.7
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 9.6e-23 111.3 176 64.2
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 4.8e-22 109.0 237 47.7
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 9.0e-21 104.8 126 90.5
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 9.0e-21 104.8 56 82.1
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 9.9e-20 101.3 50 92.0
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 1.3e-19 100.9 184 67.4
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 1.7e-19 100.5 116 56.0
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 6.4e-19 98.6 98 60.2
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 1.9e-18 97.1 117 54.7
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 2.4e-18 96.7 190 63.2
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 4.6e-17 92.4 64 71.9
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 1.8e-16 90.5 111 51.4
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 1.4e-13 80.9 199 61.3
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 4.0e-13 79.3 38 89.5
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 5.8e-12 75.5 38 89.5
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 7.6e-12 75.1 51 66.7
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 1.3e-11 74.3 56 69.6
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.6e-09 67.4 37 83.8
Cre16.g687300 Chlamydomonas reinhardtii HOM05D006605 ORTHO05D008277 2.3e-08 63.5 56 53.6
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 1.6e-06 57.4 37 67.6


User provided reference genes

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