Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G093000 Glycine max HOM05D007129 ORTHO05D008680 1.8e-53 212.2 100 100.0
Glyma.U031407 Glycine max HOM05D007129 ORTHO05D008680 1.3e-48 196.1 99 88.9
Phvul.003G197200 Phaseolus vulgaris HOM05D007129 ORTHO05D008680 1.7e-43 179.1 95 86.3
VMungo1215G0430 Vigna mungo HOM05D007129 ORTHO05D008680 4.1e-42 174.5 94 84.0
arahy.Tifrunner.gnm1.ann1.JUK8XQ Arachis hypogaea HOM05D007129 ORTHO05D008680 2.7e-41 171.8 97 80.4
arahy.Tifrunner.gnm1.ann1.N0S5JS Arachis hypogaea HOM05D007129 ORTHO05D008680 4.6e-41 171.0 97 79.4
Psat4g055920 Pisum sativum HOM05D007129 ORTHO05D008680 1.0e-40 169.9 96 80.2
Medtr4g106380 Medicago truncatula HOM05D007129 ORTHO05D008680 5.1e-40 167.5 96 78.1
Lalb_Chr12g0201391 Lupinus albus HOM05D007129 ORTHO05D008680 6.6e-40 167.2 96 80.2
Lj4g0013003 Lotus japonicus HOM05D007129 ORTHO05D008680 2.5e-39 165.2 94 77.7
Prupe.5G178800 Prunus persica HOM05D007129 ORTHO05D008680 4.0e-37 157.9 93 77.4
Hma1.2p1_1643F.1_g295180 Hydrangea macrophylla HOM05D007129 ORTHO05D008680 6.8e-37 157.1 91 75.8
QL10p012428 Quercus lobata HOM05D007129 ORTHO05D008680 6.8e-37 157.1 96 74.0
Potri.015G071300 Populus trichocarpa HOM05D007129 ORTHO05D008680 2.0e-36 155.6 91 75.8
Haze_07441 Corylus avellana HOM05D007129 ORTHO05D008680 7.6e-36 153.7 95 70.5
Atru.chr9.2406 Acer truncatum HOM05D007129 ORTHO05D008680 9.9e-36 153.3 95 73.7
Manes.06G101100 Manihot esculenta HOM05D007129 ORTHO05D008680 9.9e-36 153.3 91 74.7
MD06G1180800 Malus domestica HOM05D007129 ORTHO05D008680 1.7e-35 152.5 91 75.8
Ciclev10021561m.g Citrus clementina HOM05D007129 ORTHO05D008680 3.8e-35 151.4 95 71.6
Cfa019070 Carpinus fangiana HOM05D007129 ORTHO05D008680 6.4e-35 150.6 95 69.5
CiPaw.11G031300 Carya illinoinensis HOM05D007129 ORTHO05D008680 6.4e-35 150.6 95 70.5
Duzib205G1103 Durio zibethinus HOM05D007129 ORTHO05D008680 6.4e-35 150.6 95 71.6
Duzib068G0087 Durio zibethinus HOM05D007129 ORTHO05D008680 1.4e-34 149.4 95 70.5
Sabra15G0076600 Salix brachista HOM05D007129 ORTHO05D008680 2.4e-34 148.7 91 73.6
Sabra15G0095300 Salix brachista HOM05D007129 ORTHO05D008680 5.4e-34 147.5 91 73.6
Sabra15G0096300 Salix brachista HOM05D007129 ORTHO05D008680 5.4e-34 147.5 91 73.6
Rhsim12G0161900 Rhododendron simsii HOM05D007129 ORTHO05D008680 7.1e-34 147.1 91 71.4
TPR.G37473 Trifolium pratense HOM05D007129 ORTHO05D008680 9.2e-34 146.7 102 68.6
Thecc.03G005100 Theobroma cacao HOM05D007129 ORTHO05D008680 1.6e-33 146.0 95 68.4
Oeu016337.1 Olea europaea HOM05D007129 ORTHO05D008680 2.1e-33 145.6 91 73.6
vmacro16590 Vaccinium macrocarpon HOM05D007129 ORTHO05D008680 3.5e-33 144.8 95 68.4
CANSAT80G0701 Cannabis sativa HOM05D007129 ORTHO05D008680 6.0e-33 144.1 91 68.1
CSS0035860 Camellia sinensis var. sinensis HOM05D007129 ORTHO05D008680 7.8e-33 143.7 91 69.2
PGR044G2359 Punica granatum HOM05D007129 ORTHO05D008680 1.0e-32 143.3 95 70.5
Gohir.A12G276500 Gossypium hirsutum HOM05D007129 ORTHO05D008680 1.3e-32 142.9 88 71.6
Gohir.D12G277500 Gossypium hirsutum HOM05D007129 ORTHO05D008680 1.3e-32 142.9 88 72.7
Gorai.008G298100 Gossypium raimondii HOM05D007129 ORTHO05D008680 1.3e-32 142.9 88 72.7
CsaV3_1G008250 Cucumis sativus L. HOM05D007129 ORTHO05D008680 1.7e-32 142.5 91 68.1
Peaxi162Scf00017g02522 Petunia axillaris HOM05D007129 ORTHO05D008680 1.7e-32 142.5 90 71.1
FAN13G1816 Fragaria x ananassa HOM05D007129 ORTHO05D008680 3.0e-32 141.7 97 71.1
FAN18G4566 Fragaria x ananassa HOM05D007129 ORTHO05D008680 3.0e-32 141.7 97 71.1
HanXRQChr09g0271771 Helianthus annuus HOM05D007129 ORTHO05D008680 3.0e-32 141.7 94 71.3
RcHm_v2.0_Chr7g0179661 Rosa chinensis HOM05D007129 ORTHO05D008680 3.0e-32 141.7 97 71.1
SalBow6G7050 Salvia bowleyana HOM05D007129 ORTHO05D008680 3.0e-32 141.7 94 64.9
Lj9A453T29 Lonicera japonica HOM05D007129 ORTHO05D008680 3.9e-32 141.4 98 70.4
Sc12g0005690 Simmondsia chinensis HOM05D007129 ORTHO05D008680 3.9e-32 141.4 91 69.2
PGSC0003DMG401024472 Solanum tuberosum HOM05D007129 ORTHO05D008680 3.9e-32 141.4 96 67.7
MELO3C002241.2 Cucumis melo HOM05D007129 ORTHO05D008680 6.6e-32 140.6 91 68.1
FvH4_5g16440 Fragaria vesca HOM05D007129 ORTHO05D008680 6.6e-32 140.6 97 70.1
Solyc03g113880.4 Solanum lycopersicum HOM05D007129 ORTHO05D008680 6.6e-32 140.6 96 66.7
FAN08G0536 Fragaria x ananassa HOM05D002131 ORTHO05D002141 8.7e-32 140.2 95 71.6
Migut.D01914 Erythranthe guttata HOM05D007129 ORTHO05D008680 2.5e-31 138.7 96 62.5
CAN.G853.11 Capsicum annuum HOM05D007129 ORTHO05D008680 5.6e-31 137.5 96 65.6
Eucgr.K02877 Eucalyptus grandis HOM05D007129 ORTHO05D008680 7.3e-31 137.1 107 58.9
GSVIVG01007819001 Vitis vinifera HOM05D007129 ORTHO05D008680 1.3e-30 136.3 91 63.7
MSTRG.9665 Avicennia marina HOM05D007129 ORTHO05D008680 2.8e-30 135.2 96 64.6
TAR629G0718 Trochodendron aralioides HOM05D007129 ORTHO05D008680 2.8e-30 135.2 95 62.1
EL10Ac5g10824 Beta vulgaris HOM05D007129 ORTHO05D008680 3.6e-30 134.8 91 65.9
Hund02711 Selenicereus undatus HOM05D007129 ORTHO05D008680 3.6e-30 134.8 95 66.3
Nn4g22908 Nelumbo nucifera HOM05D007129 ORTHO05D008680 1.4e-29 132.9 91 68.1
BcaB05g23081 Brassica carinata HOM05D007129 ORTHO05D008680 3.1e-29 131.7 91 61.5
BcaNung06176 Brassica carinata HOM05D007129 ORTHO05D008680 3.1e-29 131.7 91 61.5
MBI14_g22548_MAGBIO Magnolia biondii HOM05D007129 ORTHO05D008680 6.9e-29 130.6 91 63.7
C01p32560 Brassica napus HOM05D007129 ORTHO05D008680 9.0e-29 130.2 91 60.4
HPP92_010837 Vanilla planifolia HOM05D007129 ORTHO05D008680 9.0e-29 130.2 91 63.7
BolC1t03194H Brassica oleracea HOM05D007129 ORTHO05D008680 1.2e-28 129.8 91 60.4
AT3G47830 Arabidopsis thaliana HOM05D007129 ORTHO05D008680 1.5e-28 129.4 91 59.3
Thhalv10010580m.g Eutrema salsugineum HOM05D007129 ORTHO05D008680 2.0e-28 129.0 95 61.1
Cc00_g15150 Coffea canephora HOM05D007129 ORTHO05D008680 2.6e-28 128.6 89 64.0
Aa31LG4G16490 Aethionema arabicum HOM05D007129 ORTHO05D008680 4.4e-28 127.9 91 63.7
BcaC09g49826 Brassica carinata HOM05D007129 ORTHO05D008680 4.4e-28 127.9 91 59.3
THA.LOC104821441 Tarenaya hassleriana HOM05D007129 ORTHO05D008680 4.4e-28 127.9 106 55.7
Aqoxy3G00878 Aquilegia oxysepala HOM05D007129 ORTHO05D008680 5.8e-28 127.5 91 62.6
Carub.0005s1394 Capsella rubella HOM05D007129 ORTHO05D008680 5.8e-28 127.5 97 58.8
Nitab4.5_0001642g0040 Nicotiana tabacum HOM05D007129 ORTHO05D008680 7.6e-28 127.1 96 61.5
AL5G27120 Arabidopsis lyrata HOM05D007129 ORTHO05D008680 9.9e-28 126.7 93 60.2
A01p25760 Brassica napus HOM05D007129 ORTHO05D008680 9.9e-28 126.7 95 58.9
BraA01t02492Z Brassica rapa HOM05D007129 ORTHO05D008680 9.9e-28 126.7 95 58.9
CARHR156520 Cardamine hirsuta HOM05D007129 ORTHO05D008680 9.9e-28 126.7 95 61.1
SGA_v2.0_scaffold7G04113 Striga asiatica HOM05D007129 ORTHO05D008680 1.3e-27 126.3 85 65.9
AUR62031041 Chenopodium quinoa HOM05D002131 ORTHO05D008680 3.8e-27 124.8 95 62.1
RcHm_v2.0_Chr3g0449251 Rosa chinensis HOM05D007129 ORTHO05D008680 3.8e-27 124.8 86 69.8
Nitab4.5_0001286g0070 Nicotiana tabacum HOM05D007129 ORTHO05D008680 4.9e-27 124.4 112 55.4
Lsat_1_v5_gn_4_73321 Lactuca sativa HOM05D007129 ORTHO05D008680 1.4e-26 122.9 74 73.0
COL.COLO4_04322 Corchorus olitorius HOM05D002131 ORTHO05D008680 2.4e-26 122.1 66 78.8
TWI15G0302 Tripterygium wilfordii HOM05D007129 ORTHO05D008680 3.2e-26 121.7 64 82.8
CDE04G2311 Ceratophyllum demersum HOM05D007129 ORTHO05D008680 4.2e-26 121.3 88 63.6
SEGI_05000 Sequoiadendron giganteum HOM05D007129 ORTHO05D008680 1.2e-25 119.8 89 61.8
ATR1149G142 Amborella trichopoda HOM05D007129 ORTHO05D008680 2.3e-24 115.5 91 59.3
Mapoly0074s0054 Marchantia polymorpha HOM05D007129 ORTHO05D008680 5.1e-24 114.4 91 56.0
PSO478G1802 Papaver somniferum HOM05D007129 ORTHO05D008680 6.6e-24 114.0 71 69.0
Actinidia34958 Actinidia chinensis HOM05D002131 ORTHO05D008680 1.1e-23 113.2 63 77.8
Sp5g14130 Schrenkiella parvula HOM05D007129 ORTHO05D008680 1.5e-23 112.8 63 74.6
PSO161G0060 Papaver somniferum HOM05D007129 ORTHO05D008680 4.8e-22 107.8 80 60.0
Sopen03g032940 Solanum pennellii HOM05D007129 ORTHO05D008680 8.1e-22 107.1 62 75.8
Ah.11g046160 Amaranthus hybridus HOM05D000306 ORTHO05D003182 1.8e-21 105.9 62 72.6
ECA232G1293 Erigeron canadensis HOM05D000306 ORTHO05D000410 1.8e-21 105.9 63 74.6
Dinv09179 Davidia involucrata HOM05D007129 ORTHO05D008680 9.9e-20 100.1 62 74.2
AagrBONN_evm.TU.Sc2ySwM_344.1694 Anthoceros agrestis HOM05D007129 ORTHO05D008680 6.0e-17 90.9 122 37.7
PRCOL_00005231 Prasinoderma coloniale HOM05D007129 ORTHO05D008680 3.3e-15 85.1 64 54.7
Migut.D01796 Erythranthe guttata HOM05D007129 ORTHO05D008680 4.3e-15 84.7 97 47.4
MCO09G188 Micromonas commoda HOM05D007129 ORTHO05D008680 4.3e-15 84.7 65 53.8
RcHm_v2.0_Chr1g0373451 Rosa chinensis HOM05D007129 ORTHO05D008680 9.0e-13 77.0 54 68.5
Cfa026956 Carpinus fangiana HOM05D000198 ORTHO05D008680 1.1e-10 70.1 115 33.9


User provided reference genes

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