Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G088200 Glycine max HOM05D004813 ORTHO05D005889 2.0e-239 832.4 533 100.0
Glyma.05G038800 Glycine max HOM05D004813 ORTHO05D005889 5.2e-208 728.0 530 88.3
Phvul.003G201700 Phaseolus vulgaris HOM05D004813 ORTHO05D005889 1.2e-196 690.3 525 82.9
VMungo1215G0389 Vigna mungo HOM05D004813 ORTHO05D005889 6.6e-187 657.9 524 79.0
Psat4g058360 Pisum sativum HOM05D004813 ORTHO05D005889 2.5e-170 602.8 513 69.0
Lalb_Chr07g0182801 Lupinus albus HOM05D004813 ORTHO05D005889 5.4e-165 585.1 524 75.2
arahy.Tifrunner.gnm1.ann1.J26J1M Arachis hypogaea HOM05D004813 ORTHO05D005889 7.1e-165 584.7 552 69.0
Medtr4g105590 Medicago truncatula HOM05D004813 ORTHO05D005889 3.9e-163 578.9 535 75.9
arahy.Tifrunner.gnm1.ann1.9LWV25 Arachis hypogaea HOM05D004813 ORTHO05D005889 8.7e-163 577.8 553 70.0
Ca_21934_v3 Cicer arietinum L. HOM05D004813 ORTHO05D005889 2.4e-157 559.7 537 70.0
Lj4g0001275 Lotus japonicus HOM05D004813 ORTHO05D005889 3.2e-157 559.3 552 69.4
TPR.G37503 Trifolium pratense HOM05D004813 ORTHO05D005889 2.5e-154 549.7 545 72.3
Dinv20637 Davidia involucrata HOM05D004813 ORTHO05D005889 1.4e-144 517.3 548 64.8
Nn4g22713 Nelumbo nucifera HOM05D004813 ORTHO05D005889 2.2e-142 510.0 544 61.6
COL.COLO4_30069 Corchorus olitorius HOM05D004813 ORTHO05D005889 7.1e-141 505.0 516 65.7
Thecc.03G014500 Theobroma cacao HOM05D004813 ORTHO05D005889 2.7e-140 503.1 545 67.9
Cfa019150 Carpinus fangiana HOM05D004813 ORTHO05D005889 1.3e-139 500.7 521 56.2
TAR629G2765 Trochodendron aralioides HOM05D004813 ORTHO05D005889 1.3e-139 500.7 524 64.7
CSS0044871 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 1.8e-139 500.4 556 62.1
Nitab4.5_0000514g0060 Nicotiana tabacum HOM05D004813 ORTHO05D005889 6.7e-139 498.4 546 64.1
Cpa.g.sc76.31 Carica papaya HOM05D004813 ORTHO05D005889 4.3e-138 495.7 516 65.1
Peaxi162Scf00089g01844 Petunia axillaris HOM05D004813 ORTHO05D005889 3.7e-137 492.7 541 62.7
Cc04_g12130 Coffea canephora HOM05D004813 ORTHO05D005889 4.8e-137 492.3 547 62.7
CSS0009747 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 1.8e-136 490.3 537 62.0
Potri.012G082600 Populus trichocarpa HOM05D004813 ORTHO05D005889 6.9e-136 488.4 521 62.0
MBI16_g37492_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.7e-134 483.8 548 62.4
MD14G1178200 Malus domestica HOM05D004813 ORTHO05D005889 1.7e-134 483.8 534 64.4
MBI16_g39216_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 2.2e-134 483.4 546 60.4
Manes.14G064300 Manihot esculenta HOM05D004813 ORTHO05D005889 2.2e-134 483.4 540 62.8
Gohir.D12G275800 Gossypium hirsutum HOM05D004813 ORTHO05D005889 2.9e-134 483.0 541 64.1
Gohir.A12G275100 Gossypium hirsutum HOM05D004813 ORTHO05D005889 3.8e-134 482.6 543 65.9
Gorai.008G296300 Gossypium raimondii HOM05D004813 ORTHO05D005889 8.4e-134 481.5 540 63.7
Solyc03g112820.4 Solanum lycopersicum HOM05D004813 ORTHO05D005889 3.2e-133 479.6 553 62.4
Ciclev10019513m.g Citrus clementina HOM05D004813 ORTHO05D005889 1.6e-132 477.2 550 60.2
Sopen03g031900 Solanum pennellii HOM05D004813 ORTHO05D005889 3.5e-132 476.1 548 62.6
MD06G1172400 Malus domestica HOM05D004813 ORTHO05D005889 4.6e-132 475.7 531 65.2
Oeu016404.1 Olea europaea HOM05D004813 ORTHO05D005889 6.1e-132 475.3 540 63.7
CiPaw.11G024600 Carya illinoinensis HOM05D004813 ORTHO05D005889 7.9e-132 474.9 543 58.7
MBI17_g17505_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.0e-131 474.6 541 59.7
TWI23G0210 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 1.3e-131 474.2 577 57.9
TWI14G0980 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 3.9e-131 472.6 575 58.3
QL10p010983 Quercus lobata HOM05D004813 ORTHO05D005889 5.1e-131 472.2 562 56.4
PGSC0003DMG400018096 Solanum tuberosum HOM05D004813 ORTHO05D005889 1.1e-130 471.1 553 61.7
MELO3C026213.2 Cucumis melo HOM05D004813 ORTHO05D005889 9.7e-130 468.0 531 61.2
Prupe.5G171700 Prunus persica HOM05D004813 ORTHO05D005889 1.6e-129 467.2 548 63.1
GSVIVG01007723001 Vitis vinifera HOM05D004813 ORTHO05D005889 4.8e-129 465.7 518 51.7
Sc04g0001740 Simmondsia chinensis HOM05D004813 ORTHO05D005889 1.4e-128 464.2 573 58.3
Sabra15G0103000 Salix brachista HOM05D004813 ORTHO05D005889 1.8e-128 463.8 530 57.9
CANSAT80G1068 Cannabis sativa HOM05D004813 ORTHO05D005889 5.3e-128 462.2 534 64.6
CsaV3_1G000640 Cucumis sativus L. HOM05D004813 ORTHO05D005889 6.9e-128 461.8 530 59.6
PGR044G0958 Punica granatum HOM05D004813 ORTHO05D005889 1.2e-127 461.1 552 58.5
CDE05G0644 Ceratophyllum demersum HOM05D004813 ORTHO05D005889 2.6e-127 459.9 549 62.1
BcaB02g10019 Brassica carinata HOM05D004813 ORTHO05D005889 5.9e-127 458.8 524 61.3
DCAR_031351 Daucus carota HOM05D004813 ORTHO05D005889 2.2e-126 456.8 510 61.4
Eucgr.K02829 Eucalyptus grandis HOM05D004813 ORTHO05D005889 5.0e-126 455.7 572 59.3
BcaNung05723 Brassica carinata HOM05D004813 ORTHO05D005889 1.1e-125 454.5 530 59.1
Sed0018710 Sechium edule HOM05D004813 ORTHO05D005889 1.9e-125 453.8 544 61.6
A09p09960 Brassica napus HOM05D004813 ORTHO05D005889 5.5e-125 452.2 529 59.5
BraA09t36642Z Brassica rapa HOM05D004813 ORTHO05D005889 5.5e-125 452.2 529 59.5
CARHR281210 Cardamine hirsuta HOM05D004813 ORTHO05D005889 5.5e-125 452.2 533 55.2
Potri.015G078500 Populus trichocarpa HOM05D004813 ORTHO05D005889 7.2e-125 451.8 534 63.1
Atru.chr8.1447 Acer truncatum HOM05D004813 ORTHO05D005889 1.2e-124 451.1 544 57.4
A07p17440 Brassica napus HOM05D004813 ORTHO05D005889 2.1e-124 450.3 530 57.4
Carub.0002s0981 Capsella rubella HOM05D004813 ORTHO05D005889 2.1e-124 450.3 521 62.0
vmacro16622 Vaccinium macrocarpon HOM05D004813 ORTHO05D005889 2.1e-124 450.3 573 56.4
Rhsim12G0165800 Rhododendron simsii HOM05D004813 ORTHO05D005889 2.7e-124 449.9 525 51.0
Carub.0008s2799 Capsella rubella HOM05D004813 ORTHO05D005889 6.1e-124 448.7 524 60.9
Thhalv10003981m.g Eutrema salsugineum HOM05D004813 ORTHO05D005889 7.9e-124 448.4 530 57.9
BolC9t54072H Brassica oleracea HOM05D004813 ORTHO05D005889 1.0e-123 448.0 530 61.1
Sp2g30180 Schrenkiella parvula HOM05D004813 ORTHO05D005889 6.7e-123 445.3 533 58.2
Haze_07517 Corylus avellana HOM05D004813 ORTHO05D005889 1.5e-122 444.1 570 55.6
BcaC04g23133 Brassica carinata HOM05D004813 ORTHO05D005889 3.3e-122 443.0 534 60.5
C09p11820 Brassica napus HOM05D004813 ORTHO05D005889 3.3e-122 443.0 537 61.1
AT5G66540 Arabidopsis thaliana HOM05D004813 ORTHO05D005889 2.8e-121 439.9 530 59.4
RcHm_v2.0_Chr7g0193361 Rosa chinensis HOM05D004813 ORTHO05D005889 8.2e-121 438.3 525 63.0
AL8G44980 Arabidopsis lyrata HOM05D004813 ORTHO05D005889 3.1e-120 436.4 530 59.2
Hund02755 Selenicereus undatus HOM05D004813 ORTHO05D005889 1.0e-118 431.4 545 57.6
FAN08G2504 Fragaria x ananassa HOM05D004813 ORTHO05D005889 3.8e-118 429.5 522 60.9
FAN13G1879 Fragaria x ananassa HOM05D004813 ORTHO05D005889 5.0e-118 429.1 511 62.2
Lj9A420T39 Lonicera japonica HOM05D004813 ORTHO05D005889 8.5e-118 428.3 533 51.2
FAN18G4177 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.9e-117 427.2 523 59.7
FvH4_5g05471 Fragaria vesca HOM05D004813 ORTHO05D005889 1.6e-116 424.1 511 63.4
FAN04G1884 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.6e-116 424.1 513 59.5
PSO832G2178 Papaver somniferum HOM05D004813 ORTHO05D005889 1.6e-116 424.1 542 57.0
Aa31LG1G15060 Aethionema arabicum HOM05D004813 ORTHO05D005889 2.1e-116 423.7 532 57.0
ClCG06G017810 Citrullus lanatus HOM05D004813 ORTHO05D005889 3.6e-116 422.9 611 52.2
Migut.D01957 Erythranthe guttata HOM05D004813 ORTHO05D005889 3.6e-116 422.9 567 55.9
ATR1091G095 Amborella trichopoda HOM05D004813 ORTHO05D005889 4.7e-116 422.5 523 52.8
Lsat_1_v5_gn_4_75841 Lactuca sativa HOM05D004813 ORTHO05D005889 5.1e-115 419.1 537 55.7
PSO063G0570 Papaver somniferum HOM05D004813 ORTHO05D005889 6.7e-115 418.7 539 53.6
Aqoxy3G02883 Aquilegia oxysepala HOM05D004813 ORTHO05D005889 1.1e-114 417.9 549 57.9
FAN18G0441 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.5e-114 417.5 525 59.4
SGA_v2.0_scaffold114G31819 Striga asiatica HOM05D004813 ORTHO05D005889 1.5e-114 417.5 601 56.6
AUR62010096 Chenopodium quinoa HOM05D004813 ORTHO05D005889 6.3e-113 412.1 502 51.2
unitig_0.g15 Utricularia gibba HOM05D004813 ORTHO05D005889 4.1e-112 409.5 524 55.0
AUR62013092 Chenopodium quinoa HOM05D004813 ORTHO05D005889 5.3e-112 409.1 483 52.2
SalBow6G0518 Salvia bowleyana HOM05D004813 ORTHO05D005889 2.6e-111 406.8 571 59.0
ECA232G2493 Erigeron canadensis HOM05D004813 ORTHO05D005889 2.2e-110 403.7 542 50.9
Atru.chr9.2495 Acer truncatum HOM05D004813 ORTHO05D005889 1.1e-109 401.4 538 53.9
Zm00001eb293550 Zea mays HOM05D004813 ORTHO05D005889 2.5e-109 400.2 524 55.7
HanXRQChr15g0463041 Helianthus annuus HOM05D004813 ORTHO05D005889 4.2e-109 399.4 552 53.4
Haze_17000 Corylus avellana HOM05D004813 ORTHO05D005889 6.1e-108 395.6 533 50.5
HPP92_018752 Vanilla planifolia HOM05D004813 ORTHO05D005889 9.1e-104 381.7 506 56.3
EL10Ac9g21440 Beta vulgaris HOM05D004813 ORTHO05D005889 4.5e-103 379.4 561 55.6
Os12g0133900 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 1.3e-102 377.9 540 54.1
BraA07t29465Z Brassica rapa HOM05D004813 ORTHO05D005889 2.2e-102 377.1 467 55.2
Os11g0137100 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 2.9e-102 376.7 535 54.6
Psat4g058280 Pisum sativum HOM05D004813 ORTHO05D005889 2.9e-102 376.7 500 47.2
Nitab4.5_0008678g0020 Nicotiana tabacum HOM05D004813 ORTHO05D005889 1.4e-91 341.3 292 66.4
MD01G1006000 Malus domestica HOM05D004813 ORTHO05D005889 7.7e-87 325.5 341 63.6
Ah.01g009190 Amaranthus hybridus HOM05D004813 ORTHO05D005889 1.0e-83 315.1 576 51.0
Mapoly0077s0037 Marchantia polymorpha HOM05D004813 ORTHO05D005889 1.2e-82 311.6 508 47.4
SMO367G0656 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 2.2e-81 307.4 477 49.3
Oeu020911.1 Olea europaea HOM05D004813 ORTHO05D005889 1.4e-80 304.7 527 49.5
SMO275G0031 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 1.0e-78 298.5 458 45.2
Pp3c4_31210 Physcomitrium patens HOM05D004813 ORTHO05D005889 6.8e-75 285.8 549 47.0
arahy.Tifrunner.gnm1.ann1.J34B41 Arachis hypogaea HOM05D004813 ORTHO05D005889 4.6e-71 273.1 211 71.6
AagrBONN_evm.TU.Sc2ySwM_369.357 Anthoceros agrestis HOM05D004813 ORTHO05D005889 4.0e-67 260.0 530 37.4
Actinidia19105 Actinidia chinensis HOM05D004813 ORTHO05D005889 2.6e-66 257.3 364 52.2
CAN.G1166.5 Capsicum annuum HOM05D004813 ORTHO05D005889 9.9e-58 228.8 163 74.8
PGR044G0267 Punica granatum HOM05D004813 ORTHO05D005889 1.6e-55 221.5 146 73.3
CAN.G1166.4 Capsicum annuum HOM05D004813 ORTHO05D005889 5.6e-53 213.0 328 57.9
BolC7t43059H Brassica oleracea HOM05D004813 ORTHO05D005889 7.3e-53 212.6 254 51.2
CBR_g26354 Chara braunii HOM05D004813 ORTHO05D005889 7.6e-50 202.6 254 47.6
Actinidia19106 Actinidia chinensis HOM05D004813 ORTHO05D005889 6.4e-49 199.5 126 84.1
Cre08.g370601 Chlamydomonas reinhardtii HOM05D004813 ORTHO05D005889 1.4e-48 198.4 243 49.0
SEGI_37748 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 4.6e-47 193.4 391 44.8
C07p25370 Brassica napus HOM05D004813 ORTHO05D005889 1.8e-43 181.4 264 46.6
BcaC06g34713 Brassica carinata HOM05D004813 ORTHO05D005889 7.1e-40 169.5 188 51.1
BcaNung06644 Brassica carinata HOM05D004813 ORTHO05D005889 7.1e-40 169.5 188 51.1
PRCOL_00002680 Prasinoderma coloniale HOM05D004813 ORTHO05D005889 2.2e-33 147.9 237 38.8
MBI07_g10351_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 4.8e-28 130.2 146 51.4
SEGI_16864 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 1.8e-27 128.3 101 69.3
BcaB02g10018 Brassica carinata HOM05D004813 ORTHO05D005889 1.0e-25 122.5 106 57.5
Haze_20617 Corylus avellana HOM05D004813 ORTHO05D005889 2.9e-25 120.9 154 51.9
MCO01G452 Micromonas commoda HOM05D004813 ORTHO05D005889 6.9e-19 99.8 246 32.5
MBI14_g23619_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.2e-18 99.0 62 75.8
Lj3g0016907 Lotus japonicus HOM05D004813 ORTHO05D005889 8.4e-17 92.8 62 77.4
HanXRQChr11g0336351 Helianthus annuus HOM05D004813 ORTHO05D005889 2.5e-16 91.3 77 59.7
arahy.Tifrunner.gnm1.ann1.YI6NTU Arachis hypogaea HOM05D004813 ORTHO05D005889 3.2e-16 90.9 65 76.9
MBI05_g41028_MAGBIO Magnolia biondii HOM05D000669 ORTHO05D005889 1.8e-14 85.1 58 74.1
SalBow1G5081 Salvia bowleyana HOM05D004813 ORTHO05D018488 3.9e-14 84.0 68 70.6
Lj6g0012951 Lotus japonicus HOM05D004813 ORTHO05D005889 7.4e-13 79.7 69 65.2
SEGI_40991 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 7.4e-13 79.7 79 54.4
Potri.003G194550 Populus trichocarpa HOM05D004813 ORTHO05D005889 6.3e-12 76.6 85 51.8
BcaC04g21797 Brassica carinata HOM05D004813 ORTHO05D005889 8.2e-12 76.3 101 46.5
MBI03_g03787_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.9e-08 65.1 37 78.4
MBI14_g41770_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.9e-08 65.1 73 50.7
Mapoly0050s0001 Marchantia polymorpha HOM05D004813 ORTHO05D005889 4.6e-07 60.5 67 53.7
Medtr0130s0060 Medicago truncatula HOM05D003167 ORTHO05D003929 8.8e-06 56.2 37 81.1


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