Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 1.8e-129 466.1 258 100.0
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 2.5e-115 419.1 260 86.5
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 2.9e-103 379.0 261 77.8
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 1.7e-100 369.8 261 76.6
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 7.6e-80 301.2 262 63.0
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 8.4e-79 297.7 262 63.7
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 3.3e-75 285.8 269 63.2
TPR.G24855 Trifolium pratense HOM05D003759 ORTHO05D004149 5.6e-75 285.0 263 61.6
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 2.9e-71 272.7 260 63.5
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 8.4e-63 244.6 259 58.7
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 1.1e-62 244.2 258 56.2
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 1.2e-61 240.7 259 57.5
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 3.5e-61 239.2 255 58.4
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 4.6e-61 238.8 255 55.7
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 2.5e-59 233.0 240 57.9
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea HOM05D003759 ORTHO05D004149 4.8e-58 228.8 262 55.3
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea HOM05D003759 ORTHO05D004149 1.8e-57 226.9 262 55.0
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 2.0e-48 196.8 262 53.4
ClCG02G014430 Citrullus lanatus HOM05D003759 ORTHO05D004149 2.2e-42 176.8 262 45.0
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 3.1e-41 172.9 265 41.5
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 9.0e-41 171.4 281 40.6
Gohir.A05G052900 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.6e-40 169.9 264 39.4
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 4.5e-40 169.1 282 40.4
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 4.5e-40 169.1 265 43.4
Gohir.D05G054500 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.4e-38 164.1 265 38.9
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 2.5e-38 163.3 283 42.0
Gorai.009G056200 Gossypium raimondii HOM05D003759 ORTHO05D004149 9.4e-38 161.4 265 38.5
MELO3C004129.2 Cucumis melo HOM05D003759 ORTHO05D004149 1.2e-37 161.0 279 41.2
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 2.7e-37 159.8 265 44.5
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 7.9e-37 158.3 280 42.1
Nitab4.5_0008875g0010 Nicotiana tabacum HOM05D003759 ORTHO05D004149 2.5e-35 153.3 296 37.5
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 3.3e-35 152.9 288 41.0
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 5.7e-35 152.1 265 42.3
COL.COLO4_18822 Corchorus olitorius HOM05D003759 ORTHO05D004149 1.3e-34 151.0 262 38.9
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 8.2e-34 148.3 288 37.5
Prupe.7G264400 Prunus persica HOM05D003759 ORTHO05D004149 1.1e-33 147.9 262 40.8
Eucgr.C00252 Eucalyptus grandis HOM05D003759 ORTHO05D004149 4.1e-33 146.0 286 35.7
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 9.1e-33 144.8 258 42.2
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 9.1e-33 144.8 280 38.2
CsaV3_2G007570 Cucumis sativus L. HOM05D003759 ORTHO05D004149 2.0e-32 143.7 219 43.4
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 2.0e-32 143.7 298 36.6
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 5.9e-32 142.1 260 38.8
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 1.7e-31 140.6 261 41.4
Gohir.D07G031400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.2e-31 140.2 263 38.4
Gorai.001G032800 Gossypium raimondii HOM05D003759 ORTHO05D004149 2.2e-31 140.2 263 38.4
CSS0036931 Camellia sinensis var. sinensis HOM05D003759 ORTHO05D004149 2.9e-31 139.8 327 35.5
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 2.9e-31 139.8 261 39.1
Duzib150G1598 Durio zibethinus HOM05D003759 ORTHO05D004149 2.9e-31 139.8 266 38.3
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 1.4e-30 137.5 285 37.5
Gohir.A07G027400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.4e-30 137.5 263 37.6
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 1.4e-30 137.5 329 35.0
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 1.9e-30 137.1 261 38.7
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 3.2e-30 136.3 303 35.3
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 4.2e-30 136.0 262 38.2
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 4.2e-30 136.0 303 35.6
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 9.4e-30 134.8 262 37.0
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 1.2e-29 134.4 264 37.9
MSTRG.6151 Avicennia marina HOM05D003759 ORTHO05D004149 2.1e-29 133.7 287 35.5
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 2.1e-29 133.7 304 35.9
FAN28G1366 Fragaria x ananassa HOM05D003759 ORTHO05D004149 1.4e-28 131.0 261 36.0
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 5.1e-28 129.0 296 35.1
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 8.8e-28 128.3 273 36.6
FvH4_1g00810 Fragaria vesca HOM05D003759 ORTHO05D004149 8.8e-28 128.3 261 35.6
FAN23G1979 Fragaria x ananassa HOM05D003759 ORTHO05D004149 8.8e-28 128.3 261 36.0
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.5e-27 127.5 304 35.9
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 2.0e-27 127.1 262 38.2
SalBow1G3284 Salvia bowleyana HOM05D003759 ORTHO05D004149 4.4e-27 125.9 308 35.7
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 7.4e-27 125.2 300 35.0
CAN.G551.47 Capsicum annuum HOM05D003759 ORTHO05D004149 9.7e-27 124.8 285 35.4
Migut.J01364 Erythranthe guttata HOM05D003759 ORTHO05D004149 1.7e-26 124.0 295 34.9
RcHm_v2.0_Chr2g0085521 Rosa chinensis HOM05D003759 ORTHO05D004149 1.7e-26 124.0 261 35.6
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 2.2e-26 123.6 303 34.7
PGSC0003DMG400011142 Solanum tuberosum HOM05D003759 ORTHO05D004149 2.2e-26 123.6 309 35.0
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 2.8e-26 123.2 270 38.5
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 3.7e-26 122.9 301 33.2
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 3.7e-26 122.9 309 32.7
CAN.G160.50 Capsicum annuum HOM05D003759 ORTHO05D004149 8.2e-26 121.7 296 35.8
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.1e-25 121.3 303 33.7
MD02G1006500 Malus domestica HOM05D003759 ORTHO05D004149 1.1e-25 121.3 262 37.4
TWI32G1309 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 1.4e-25 120.9 262 34.7
TWI34G0689 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 7.0e-25 118.6 264 35.6
SalBow1G6739 Salvia bowleyana HOM05D003759 ORTHO05D004149 9.1e-25 118.2 304 35.9
THA.LOC104819991 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.6e-24 117.5 243 36.6
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 2.6e-24 116.7 295 33.6
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 1.3e-23 114.4 305 32.8
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 1.7e-23 114.0 264 36.0
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 1.7e-23 114.0 266 39.1
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 1.7e-23 114.0 305 33.1
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 1.7e-23 114.0 266 36.5
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 2.2e-23 113.6 270 38.1
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 5.0e-23 112.5 268 35.4
BcaB05g22385 Brassica carinata HOM05D003759 ORTHO05D004149 6.5e-23 112.1 246 39.0
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 6.5e-23 112.1 261 36.0
Sp7g28510 Schrenkiella parvula HOM05D003759 ORTHO05D004149 1.1e-22 111.3 242 36.4
Sed0021485 Sechium edule HOM05D003759 ORTHO05D004149 1.9e-22 110.5 225 38.2
Cc06_g14820 Coffea canephora HOM05D003759 ORTHO05D004149 2.5e-22 110.2 309 37.9
Oeu026461.3 Olea europaea HOM05D003759 ORTHO05D004149 4.2e-22 109.4 325 33.5
Migut.K00316 Erythranthe guttata HOM05D003759 ORTHO05D004149 1.6e-21 107.5 249 34.1
CiPaw.16G108400 Carya illinoinensis HOM05D003759 ORTHO05D004149 2.1e-21 107.1 261 37.2
AT5G57910 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 1.0e-20 104.8 250 36.4
Hma1.2p1_0222F.1_g093656 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 5.2e-20 102.4 110 56.4
Hma1.2p1_2680F.1_g326800 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 5.2e-20 102.4 110 56.4
C09p49780 Brassica napus HOM05D003759 ORTHO05D004149 8.8e-20 101.7 243 34.6
TWI63G0632 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 1.5e-19 100.9 290 31.7
BolC9t57829H Brassica oleracea HOM05D003759 ORTHO05D004149 2.0e-19 100.5 243 33.3
HanXRQChr09g0244591 Helianthus annuus HOM05D003759 ORTHO05D004149 3.3e-19 99.8 252 32.9
Thhalv10014665m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 5.7e-19 99.0 247 34.8
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.3e-18 97.8 178 36.5
Duzib168G1894 Durio zibethinus HOM05D003759 ORTHO05D004149 1.3e-18 97.8 233 32.6
A10p15270 Brassica napus HOM05D003759 ORTHO05D004149 1.7e-18 97.4 238 33.6
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 2.2e-18 97.1 294 32.3
BraA10t43608Z Brassica rapa HOM05D003759 ORTHO05D004149 3.7e-18 96.3 238 33.2
Oeu028997.1 Olea europaea HOM05D003759 ORTHO05D004149 3.7e-18 96.3 219 36.1
DCAR_014806 Daucus carota HOM05D003759 ORTHO05D004149 6.3e-18 95.5 284 32.4
Lsat_1_v5_gn_5_90100 Lactuca sativa HOM05D003759 ORTHO05D004149 7.0e-17 92.0 228 37.7
CARHR271690 Cardamine hirsuta HOM05D003759 ORTHO05D004149 9.1e-17 91.7 248 34.7
BcaB05g22386 Brassica carinata HOM05D003759 ORTHO05D004149 1.2e-16 91.3 243 35.0
A03p12490 Brassica napus HOM05D003759 ORTHO05D004149 1.2e-16 91.3 246 35.4
C02p13760 Brassica napus HOM05D003759 ORTHO05D004149 1.2e-16 91.3 243 35.0
BolC2t07494H Brassica oleracea HOM05D003759 ORTHO05D004149 1.2e-16 91.3 243 35.0
THA.LOC104813538 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.2e-16 91.3 245 31.4
A01p07630 Brassica napus HOM05D003759 ORTHO05D004149 1.6e-16 90.9 241 32.8
C03p14700 Brassica napus HOM05D003759 ORTHO05D004149 1.6e-16 90.9 246 35.8
ECA240G4545 Erigeron canadensis HOM05D003759 ORTHO05D004149 1.6e-16 90.9 263 38.4
A02p08110 Brassica napus HOM05D003759 ORTHO05D004149 2.0e-16 90.5 244 32.8
BraA01t00706Z Brassica rapa HOM05D003759 ORTHO05D004149 2.0e-16 90.5 241 32.8
BraA02t05884Z Brassica rapa HOM05D003759 ORTHO05D004149 2.0e-16 90.5 244 32.8
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 3.5e-16 89.7 142 40.8
BcaNung00572 Brassica carinata HOM05D003759 ORTHO05D004149 4.5e-16 89.4 244 34.8
BcaNung02973 Brassica carinata HOM05D003759 ORTHO05D004149 4.5e-16 89.4 242 36.4
BraA03t15060Z Brassica rapa HOM05D003759 ORTHO05D004149 4.5e-16 89.4 258 34.5
C07p58060 Brassica napus HOM05D000058 ORTHO05D000077 1.3e-15 87.8 258 34.1
BolC3t13911H Brassica oleracea HOM05D003759 ORTHO05D004149 1.3e-15 87.8 246 35.4
Actinidia01426 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.7e-15 87.4 80 57.5
Carub.0008s1844 Capsella rubella HOM05D003759 ORTHO05D004149 2.2e-15 87.0 253 32.8
CsaV3_1G029050 Cucumis sativus L. HOM05D003759 ORTHO05D004149 2.2e-15 87.0 121 47.1
THA.LOC104803918 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 2.2e-15 87.0 240 32.1
A03p60150 Brassica napus HOM05D003759 ORTHO05D004149 2.9e-15 86.7 248 34.3
AL7G21510 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 3.8e-15 86.3 231 35.1
Hma1.2p1_0222F.1_g093653 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 3.8e-15 86.3 363 28.9
Hma1.2p1_2680F.1_g326810 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 3.8e-15 86.3 363 28.9
unitig_748.g7198 Utricularia gibba HOM05D003759 ORTHO05D004149 3.8e-15 86.3 262 30.5
BolC7t46265H Brassica oleracea HOM05D003759 ORTHO05D004149 5.0e-15 85.9 244 34.0
Peaxi162Scf00401g00425 Petunia axillaris HOM05D003759 ORTHO05D004149 5.0e-15 85.9 274 30.7
Potri.006G183000 Populus trichocarpa HOM05D003759 ORTHO05D004149 5.0e-15 85.9 209 35.9
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 8.5e-15 85.1 269 30.1
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 1.5e-14 84.3 107 51.4
PSO384G1085 Papaver somniferum HOM05D003759 ORTHO05D004149 3.2e-14 83.2 268 32.8
BcaC09g51852 Brassica carinata HOM05D003759 ORTHO05D004149 4.2e-14 82.8 243 32.9
C01p08320 Brassica napus HOM05D003759 ORTHO05D004149 4.2e-14 82.8 243 32.5
Aa31LG3G13740 Aethionema arabicum HOM05D003759 ORTHO05D004149 5.5e-14 82.4 230 34.8
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 1.6e-13 80.9 78 53.8
Thhalv10026294m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 2.1e-13 80.5 214 34.6
HanXRQChr03g0065561 Helianthus annuus HOM05D003759 ORTHO05D004149 2.1e-13 80.5 268 29.5
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 4.7e-13 79.3 302 27.5
unitig_0.g2686 Utricularia gibba HOM05D003759 ORTHO05D004149 4.7e-13 79.3 256 29.7
BcaNung04561 Brassica carinata HOM05D003759 ORTHO05D004149 1.0e-12 78.2 246 32.1
BolC1t00818H Brassica oleracea HOM05D003759 ORTHO05D004149 1.8e-12 77.4 241 31.5
BraA03t10564Z Brassica rapa HOM05D003759 ORTHO05D004149 1.8e-12 77.4 246 33.3
Sed0022175 Sechium edule HOM05D003759 ORTHO05D004149 1.8e-12 77.4 169 35.5
Aqoxy7G03381 Aquilegia oxysepala HOM05D003759 ORTHO05D004149 5.2e-12 75.9 266 28.9
AT4G30630 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 5.2e-12 75.9 225 34.7
Dinv41365 Davidia involucrata HOM05D003759 ORTHO05D004149 6.8e-12 75.5 71 66.2
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 6.8e-12 75.5 158 38.0
vmacro16796 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 8.8e-12 75.1 303 26.4
DCAR_021655 Daucus carota HOM05D002201 ORTHO05D007560 3.7e-10 69.7 112 41.1
AL8G33980 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 4.8e-10 69.3 224 32.1
CARHR238510 Cardamine hirsuta HOM05D003759 ORTHO05D004149 4.8e-10 69.3 256 31.6
HanXRQChr16g0511321 Helianthus annuus HOM05D003759 ORTHO05D004149 8.3e-10 68.6 128 39.8
HPP92_018342 Vanilla planifolia HOM05D003759 ORTHO05D004149 2.4e-09 67.0 245 27.8
Carub.0007s0993 Capsella rubella HOM05D003759 ORTHO05D004149 3.1e-09 66.6 224 31.7
CDE02G3703 Ceratophyllum demersum HOM05D003759 ORTHO05D004149 3.1e-09 66.6 99 43.4
Os08g0270800 Oryza sativa ssp. japonica HOM05D037779 ORTHO05D004149 7.0e-09 65.5 253 30.0
Sp6g19580 Schrenkiella parvula HOM05D003759 ORTHO05D004149 9.1e-09 65.1 207 33.8
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 1.6e-08 64.3 89 44.9
HPP92_010344 Vanilla planifolia HOM05D045913 ORTHO05D004149 1.6e-08 64.3 277 27.4
Nn8g39944 Nelumbo nucifera HOM05D003759 ORTHO05D004149 5.9e-08 62.4 72 51.4
CDE05G3257 Ceratophyllum demersum HOM05D003759 ORTHO05D004149 1.3e-07 61.2 93 44.1
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 6.5e-07 58.9 85 44.7
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 1.5e-06 57.8 99 42.4
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 1.5e-06 57.8 99 42.4
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 1.9e-06 57.4 158 31.0
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 4.2e-06 56.2 85 44.7
Aa31LG2G19870 Aethionema arabicum HOM05D003759 ORTHO05D004149 5.5e-06 55.8 236 27.5
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 5.5e-06 55.8 56 53.6
Manes.03G008000 Manihot esculenta HOM05D008192 ORTHO05D010301 5.5e-06 55.8 86 39.5
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 7.2e-06 55.5 84 42.9


User provided reference genes

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